Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160873213
Identifier: 160873213
GI number: 160873213
Start: 105845
End: 106240
Strand: Direct
Name: 160873213
Synonym: Sbal195_0087
Alternate gene names: NA
Gene position: 105845-106240 (Clockwise)
Preceding gene: 160873209
Following gene: 160873214
Centisome position: 1.98
GC content: 49.24
Gene sequence:
>396_bases ATGATTAAACGAGTCGGAAACACCCATATTCAAGCTGAACACCAAGCGTCTTGCCATTGTGGCGCTGTGGTGTTGCAATT ATCGCTGCCCAATGGCATCGAAAATCCTCGCCGCTGCGATTGTTCTATCTGCCGCCGTAAGGGCGCGGTTATCGGCTCTG TACCGCTGGCGGGGATTAAGATCCTCAAGGGTGAAGATGTGCTGAAATGCTATGAATTCAATACCAAAACCGCTAAGCAT TACTTCTGCTCCAACTGCGGCATTTATACCCATCACCAGCGGCGTTCCAATCCCCATGAATATGGTTACAACATTGGTTG CCTCGAAGGGGTTAATCCATTCGATTTAGACAATGTGCCCACGAATGATGGCGTTAACCATCCTGCGGATCGTTAG
Upstream 100 bases:
>100_bases GCTCGTTTAAGATGGTCAGACTAGCAGCATAAAGAACAAGCGACAAGCCATGGCGTTATAGGCATTTAGCGATAACATTA AGCGAAACAAGGAGCAGTGC
Downstream 100 bases:
>100_bases ATTATGAACATAGGTCAGTTTGCTGCACTCACAGGTTTGTCGGCGCATACGCTCAGGTATTACGAGAAAATCGGTTTGCT ACGGTCTGTGGTGCGAAATG
Product: glutathione-dependent formaldehyde-activating protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating; Plasmid PRiA4b ORF-3 Family Protein; Inner Membrane Protein; Gfa-Like Protein; Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating Protein Gfa
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MIKRVGNTHIQAEHQASCHCGAVVLQLSLPNGIENPRRCDCSICRRKGAVIGSVPLAGIKILKGEDVLKCYEFNTKTAKH YFCSNCGIYTHHQRRSNPHEYGYNIGCLEGVNPFDLDNVPTNDGVNHPADR
Sequences:
>Translated_131_residues MIKRVGNTHIQAEHQASCHCGAVVLQLSLPNGIENPRRCDCSICRRKGAVIGSVPLAGIKILKGEDVLKCYEFNTKTAKH YFCSNCGIYTHHQRRSNPHEYGYNIGCLEGVNPFDLDNVPTNDGVNHPADR >Mature_131_residues MIKRVGNTHIQAEHQASCHCGAVVLQLSLPNGIENPRRCDCSICRRKGAVIGSVPLAGIKILKGEDVLKCYEFNTKTAKH YFCSNCGIYTHHQRRSNPHEYGYNIGCLEGVNPFDLDNVPTNDGVNHPADR
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI56118234, Length=97, Percent_Identity=37.1134020618557, Blast_Score=69, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25149380, Length=100, Percent_Identity=38, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI25149382, Length=92, Percent_Identity=40.2173913043478, Blast_Score=73, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14518; Mature: 14518
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 6.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKRVGNTHIQAEHQASCHCGAVVLQLSLPNGIENPRRCDCSICRRKGAVIGSVPLAGIK CCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCEEECCCCCCEE ILKGEDVLKCYEFNTKTAKHYFCSNCGIYTHHQRRSNPHEYGYNIGCLEGVNPFDLDNVP EECCCCEEEEEECCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCC TNDGVNHPADR CCCCCCCCCCC >Mature Secondary Structure MIKRVGNTHIQAEHQASCHCGAVVLQLSLPNGIENPRRCDCSICRRKGAVIGSVPLAGIK CCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCEEECCCCCCEE ILKGEDVLKCYEFNTKTAKHYFCSNCGIYTHHQRRSNPHEYGYNIGCLEGVNPFDLDNVP EECCCCEEEEEECCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCC TNDGVNHPADR CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA