Click here to switch to the map view.

The map label for this gene is yibN [H]

Identifier: 160873174

GI number: 160873174

Start: 55979

End: 56428

Strand: Direct

Name: yibN [H]

Synonym: Sbal195_0048

Alternate gene names: 160873174

Gene position: 55979-56428 (Clockwise)

Preceding gene: 160873169

Following gene: 160873175

Centisome position: 1.05

GC content: 40.67

Gene sequence:

>450_bases
ATGCGGGCAATCATCATGCAAGAATATATCGAATTTTTTAAAGCTCACTCAATGTTAAGTCTGGCCTGGGTGGGATTATT
TGTTGTGCTTGTCGCGAGTATCATCAAATCGAGCATGTCAAAAATCAAAAGTATTTCTCACCAAGAACTGACAATTATGG
TGAACAGACAGGACGCTAAAGTCGTTGATGTGCGCTCTAATGACGAGTTCCGCAAGGGGCATATTGTTGATGCAATTAAC
GTTACGCTAGCAGATATTAAAAATAATCAGGTATCTGCCCTTGAAAAGTATAAAGCGAGTCCCATTATATTGGTATGCAA
TGCTGGCATGACCTCGTCTCAAGCCGCTCAGCTTTTGAGTAAGCAAGGTTTTGAAAACCTGTACAACTTGAAAGGTGGTA
TGGGTGAATGGCAGGCAGCAAATATGCCTGTTTCAAAAAGCAAAAGATAA

Upstream 100 bases:

>100_bases
GGCAATTGCGCTAAAAGTGCGATCTCGAACTGTGACTAAACTGCTGCAATCTGCCAAGGCAATCGGTATACTCTGTGCCC
TTATCGAATTTTCGCCATTT

Downstream 100 bases:

>100_bases
GTTGTCGGCGGCAGTTATGATTTAAGCTGCACTCAATCCACCGGATAGTGCAGTAATAAAGTCATCATTGTTTGGCATAC
TGATCCTGCGGTCGCTAAGG

Product: rhodanese domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MRAIIMQEYIEFFKAHSMLSLAWVGLFVVLVASIIKSSMSKIKSISHQELTIMVNRQDAKVVDVRSNDEFRKGHIVDAIN
VTLADIKNNQVSALEKYKASPIILVCNAGMTSSQAAQLLSKQGFENLYNLKGGMGEWQAANMPVSKSKR

Sequences:

>Translated_149_residues
MRAIIMQEYIEFFKAHSMLSLAWVGLFVVLVASIIKSSMSKIKSISHQELTIMVNRQDAKVVDVRSNDEFRKGHIVDAIN
VTLADIKNNQVSALEKYKASPIILVCNAGMTSSQAAQLLSKQGFENLYNLKGGMGEWQAANMPVSKSKR
>Mature_149_residues
MRAIIMQEYIEFFKAHSMLSLAWVGLFVVLVASIIKSSMSKIKSISHQELTIMVNRQDAKVVDVRSNDEFRKGHIVDAIN
VTLADIKNNQVSALEKYKASPIILVCNAGMTSSQAAQLLSKQGFENLYNLKGGMGEWQAANMPVSKSKR

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1790040, Length=143, Percent_Identity=41.958041958042, Blast_Score=131, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 16562; Mature: 16562

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAIIMQEYIEFFKAHSMLSLAWVGLFVVLVASIIKSSMSKIKSISHQELTIMVNRQDAK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCE
VVDVRSNDEFRKGHIVDAINVTLADIKNNQVSALEKYKASPIILVCNAGMTSSQAAQLLS
EEEECCCCCCCCCCEEHHHHEEEECCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
KQGFENLYNLKGGMGEWQAANMPVSKSKR
HHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRAIIMQEYIEFFKAHSMLSLAWVGLFVVLVASIIKSSMSKIKSISHQELTIMVNRQDAK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCE
VVDVRSNDEFRKGHIVDAINVTLADIKNNQVSALEKYKASPIILVCNAGMTSSQAAQLLS
EEEECCCCCCCCCCEEHHHHEEEECCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
KQGFENLYNLKGGMGEWQAANMPVSKSKR
HHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]