Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160873137
Identifier: 160873137
GI number: 160873137
Start: 11214
End: 12254
Strand: Direct
Name: 160873137
Synonym: Sbal195_0011
Alternate gene names: NA
Gene position: 11214-12254 (Clockwise)
Preceding gene: 160873135
Following gene: 160873140
Centisome position: 0.21
GC content: 44.86
Gene sequence:
>1041_bases TTGATTAAATCACTTTTTAATAAGCTCTTTAATATTCGCGATACAGCGACGGTTGAGAGGCCCAAAAGTTTTTCAACCAC TGACTTAGGTAAGTCGCTTGAACCTGCGCGAAAGCCAGCTAAACCTCTCGAAGACATTAGTGTGGTATCTGTGGATTTAG CCGCACTCTTTTATAGTTTGTTGTTTCCAACACGGGTTAAGGACACTGGCGGTGTAGCTAATAATCTTGAACGTCGAGTC ATGGCGGAGATAGAGCAGGCATTGGCATCGCCACAAGTGATCGCCGAAAAAGTGCTAAAGCTACCGTCAAAGGTATTGGA GCTAGATCGTAAGCTGGCCGATCCTCAGTTTGATATAAAGGATCTATTAGCGCTTATTGAGCGAGATCCTTTACTGAGTA TTGAGGTACTTAAGCTATGTAACTCCCCTGCGTTTAAACGTAGCGATAAGGATATCACCAGTTTACAACAGGCTTTGGTA CAGCTTGGTCGTGAACAGTTAAGAAAGTTTGTCACCACTTGTCTAGTGCGTGAAATGTTGGATATCAAGCCAATTTATTT TCGTCGTTTCGGCGCTGAAATTTGGCGCCACTCGATGCAGGTCGCCTTTCTCGCCAGTGAGTTAAGCGATGAAGATCAAG ATACGGCTTTTTTATTGGGCTTATTGCATGATGTCGGCAAGCTGGCCATTTTCAAAATGCTACTCGATGCGTTTGTGCAG GCGGAGCCGGGAGAACAGCCTAATTCTGGGTTATTTAGACAAGTGATGACGACGAAATCGTTAACCTTAAGTTCATTGCT CGCTAAGTATTGGCAGCTACCCAATACCTTTGAAACAGAATTAGACAAGCTCGCCAGTGTGAACTCGCGCCCGCAAGCTG GGCTCGCCGCTGTGATATGGCGGACGAATGTGATCAGCGAGATTTCTATGCTGCATCAAGCAGGGCAATTGTCTCCTGAA ATACTGGCGAATTTACTGCAGCAAGTTAACTTAGATCAAACTCAATTTGATGGCTTACATCAAAAACTGACGCAGTTCTG A
Upstream 100 bases:
>100_bases AACGTGTTTATATATAGCTTTAGCGGATCAAAATGGATTTATTATGGGCAATATTTAACTGACTTTTTAACAATTATTTA TAATGACAGGTTGATGCTCC
Downstream 100 bases:
>100_bases TTGGGCTGTTTAAGAAATCAGGGCAATAAAAAACGCGCTATTGAGCGCGTTTTTTATAAATCGATAATTTTAAAAGCTTT AGTATCATTATTGCAGTAGT
Product: putative signal transduction protein
Products: NA
Alternate protein names: Metal Dependent Phosphohydrolase; Sensor Histidine Kinase; HD Domain-Containing Protein; Histidine Kinase; Metal Dependent Phosphohydrolase Superfamily Protein; Metal-Dependent Hydrolase HDOD; Transcriptional Regulator Fis Family; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MIKSLFNKLFNIRDTATVERPKSFSTTDLGKSLEPARKPAKPLEDISVVSVDLAALFYSLLFPTRVKDTGGVANNLERRV MAEIEQALASPQVIAEKVLKLPSKVLELDRKLADPQFDIKDLLALIERDPLLSIEVLKLCNSPAFKRSDKDITSLQQALV QLGREQLRKFVTTCLVREMLDIKPIYFRRFGAEIWRHSMQVAFLASELSDEDQDTAFLLGLLHDVGKLAIFKMLLDAFVQ AEPGEQPNSGLFRQVMTTKSLTLSSLLAKYWQLPNTFETELDKLASVNSRPQAGLAAVIWRTNVISEISMLHQAGQLSPE ILANLLQQVNLDQTQFDGLHQKLTQF
Sequences:
>Translated_346_residues MIKSLFNKLFNIRDTATVERPKSFSTTDLGKSLEPARKPAKPLEDISVVSVDLAALFYSLLFPTRVKDTGGVANNLERRV MAEIEQALASPQVIAEKVLKLPSKVLELDRKLADPQFDIKDLLALIERDPLLSIEVLKLCNSPAFKRSDKDITSLQQALV QLGREQLRKFVTTCLVREMLDIKPIYFRRFGAEIWRHSMQVAFLASELSDEDQDTAFLLGLLHDVGKLAIFKMLLDAFVQ AEPGEQPNSGLFRQVMTTKSLTLSSLLAKYWQLPNTFETELDKLASVNSRPQAGLAAVIWRTNVISEISMLHQAGQLSPE ILANLLQQVNLDQTQFDGLHQKLTQF >Mature_346_residues MIKSLFNKLFNIRDTATVERPKSFSTTDLGKSLEPARKPAKPLEDISVVSVDLAALFYSLLFPTRVKDTGGVANNLERRV MAEIEQALASPQVIAEKVLKLPSKVLELDRKLADPQFDIKDLLALIERDPLLSIEVLKLCNSPAFKRSDKDITSLQQALV QLGREQLRKFVTTCLVREMLDIKPIYFRRFGAEIWRHSMQVAFLASELSDEDQDTAFLLGLLHDVGKLAIFKMLLDAFVQ AEPGEQPNSGLFRQVMTTKSLTLSSLLAKYWQLPNTFETELDKLASVNSRPQAGLAAVIWRTNVISEISMLHQAGQLSPE ILANLLQQVNLDQTQFDGLHQKLTQF
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38905; Mature: 38905
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKSLFNKLFNIRDTATVERPKSFSTTDLGKSLEPARKPAKPLEDISVVSVDLAALFYSL CHHHHHHHHHCCCHHHHHCCCCCCCHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHH LFPTRVKDTGGVANNLERRVMAEIEQALASPQVIAEKVLKLPSKVLELDRKLADPQFDIK HCCHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH DLLALIERDPLLSIEVLKLCNSPAFKRSDKDITSLQQALVQLGREQLRKFVTTCLVREML HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIKPIYFRRFGAEIWRHSMQVAFLASELSDEDQDTAFLLGLLHDVGKLAIFKMLLDAFVQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEPGEQPNSGLFRQVMTTKSLTLSSLLAKYWQLPNTFETELDKLASVNSRPQAGLAAVIW CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHH RTNVISEISMLHQAGQLSPEILANLLQQVNLDQTQFDGLHQKLTQF HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MIKSLFNKLFNIRDTATVERPKSFSTTDLGKSLEPARKPAKPLEDISVVSVDLAALFYSL CHHHHHHHHHCCCHHHHHCCCCCCCHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHH LFPTRVKDTGGVANNLERRVMAEIEQALASPQVIAEKVLKLPSKVLELDRKLADPQFDIK HCCHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH DLLALIERDPLLSIEVLKLCNSPAFKRSDKDITSLQQALVQLGREQLRKFVTTCLVREML HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIKPIYFRRFGAEIWRHSMQVAFLASELSDEDQDTAFLLGLLHDVGKLAIFKMLLDAFVQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEPGEQPNSGLFRQVMTTKSLTLSSLLAKYWQLPNTFETELDKLASVNSRPQAGLAAVIW CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHH RTNVISEISMLHQAGQLSPEILANLLQQVNLDQTQFDGLHQKLTQF HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA