Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159901019
Identifier: 159901019
GI number: 159901019
Start: 5770214
End: 5770576
Strand: Direct
Name: 159901019
Synonym: Haur_4506
Alternate gene names: NA
Gene position: 5770214-5770576 (Clockwise)
Preceding gene: 159901018
Following gene: 159901020
Centisome position: 90.92
GC content: 46.56
Gene sequence:
>363_bases ATGGCACAACGTGGGCGAATTCCAGCTGGTTTAGGCCATTTTTTAGTGGCGTTTGGGCTAGGTGCAGCATTTAATCTAGG CGTTAGCTATGGCCTGATTGGCCTAATCGTGGTTTCATTCATCACGTTAATTGTATTTATTGTTGATAAACAAAAATCGC GTGGTCGTGGCCGCCGAATTGCCGAGAGTACGCTATTGTGGTTTGTGGCTGTTGGTGGAACCTTAGGCGCTGTGGTGGGC ATTTGGTTTTTTCGGCATAAATCGCAAAAAACCACGTTTCTGCAAGGTTTTTGGCTAATTGTTGGTTGCCAAGTTGTTGG CTTATTGGCCGTTGGCTTGGTGCGTGACCTGCTGTTAAACTGA
Upstream 100 bases:
>100_bases CAACCCTGAATAATTGTTCAAACGGCGACGATCTAGTATTTCTAGATCGTCGCCGTTTTTCGTTATAATAGCCTGCATTG TTTGTGATTGAGGTTGACCA
Downstream 100 bases:
>100_bases ACCATAACTGCGACCCACAGCTGGTAACGCAGAGGGATGAACATAGAGCATCCATGGGGATCAGAAGATTATTCGTGGAA TTCGTGCAATTCGTGGCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MAQRGRIPAGLGHFLVAFGLGAAFNLGVSYGLIGLIVVSFITLIVFIVDKQKSRGRGRRIAESTLLWFVAVGGTLGAVVG IWFFRHKSQKTTFLQGFWLIVGCQVVGLLAVGLVRDLLLN
Sequences:
>Translated_120_residues MAQRGRIPAGLGHFLVAFGLGAAFNLGVSYGLIGLIVVSFITLIVFIVDKQKSRGRGRRIAESTLLWFVAVGGTLGAVVG IWFFRHKSQKTTFLQGFWLIVGCQVVGLLAVGLVRDLLLN >Mature_119_residues AQRGRIPAGLGHFLVAFGLGAAFNLGVSYGLIGLIVVSFITLIVFIVDKQKSRGRGRRIAESTLLWFVAVGGTLGAVVGI WFFRHKSQKTTFLQGFWLIVGCQVVGLLAVGLVRDLLLN
Specific function: Unknown
COG id: COG3326
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12958; Mature: 12827
Theoretical pI: Translated: 12.08; Mature: 12.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQRGRIPAGLGHFLVAFGLGAAFNLGVSYGLIGLIVVSFITLIVFIVDKQKSRGRGRRI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH AESTLLWFVAVGGTLGAVVGIWFFRHKSQKTTFLQGFWLIVGCQVVGLLAVGLVRDLLLN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AQRGRIPAGLGHFLVAFGLGAAFNLGVSYGLIGLIVVSFITLIVFIVDKQKSRGRGRRI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH AESTLLWFVAVGGTLGAVVGIWFFRHKSQKTTFLQGFWLIVGCQVVGLLAVGLVRDLLLN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA