Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159901018
Identifier: 159901018
GI number: 159901018
Start: 5768749
End: 5770110
Strand: Direct
Name: 159901018
Synonym: Haur_4505
Alternate gene names: NA
Gene position: 5768749-5770110 (Clockwise)
Preceding gene: 159901017
Following gene: 159901019
Centisome position: 90.9
GC content: 53.52
Gene sequence:
>1362_bases ATGACCCCGACACTGCGACGATGGACAACGCGGGTTGTGCTACTTGCAACAATGTTGATGGCAGGTGGTCCAAGTGCCAG CTTTGCCAATGTGAGCAAAGGCGTAGAATCAGCCAGTGTTGAGACAGTCGTTGAACCAACTGCTGAACCAACTGCTGAGC CAACTGCTGAACTAACCGCTGAGCCAACCGCTGAGCCAACCGGAACAGCAGCCCCAACCGCAGCCCCAACCGGAACAGCA GCCCCAACCGCAGCTCCAGTCTGTGACCCAAAGGCTGATCTTTCGGGTTGGTTCTCAAGCAATACCGTCGGCAAGATTTG GAATAAATCAAGCACCTGCTCCTACGATGTAGGTATGGCTTCGTATCAAAAATTTGATGAAATCATCGATCACCAATTGA TTTATTCGTGGGCAATTGGCCGAGTTGGCCCAAAAACAACTGTTTCTTTAAGCGTTTCAGTGCCCGATTGTGCTACCCAA ATTGATGTATTCTATGGGCCTGTATTGCACTCGCTCGATGGTCAACGCTATGGCGAGCGCTTGCTCTCATCTCGCCACCT TGGCGGAACCAGCTATTGTGGTGTAACAACTCCAACCAACACGCCAGAACCAACGGCTGAGCCAACGGTTGCCCCAACCA ATACGCCAGAACCAACCGCCTACCCAACGCCAACAGCAGAACCAACAGTTGCGCCAACCAATACACCAGAACCAACGGCA GAACCAACAGTTGCACCAACTAACACGCCAGAACCAACGGTTGCGCCAACGGTTGCACCAACTAACACGCCAGAACCAAC GGTTGCGCCAACCAACACGCCAGAACCAACTGCCTACCCAACACCAACCGCTGTGCCAACCGCGACCAAGACACCAGTCC CAACCGCGACGAAGACACCCGCGCCAACTGCAACCAGCACGCCAGCGCCAACCGCGACGAAGACACCAGTCCCAACCGCG ACGAAGACACCCGCGCCAACTGCAACCAGCACGCCTACTGGTAAAGATTGTACCTATACCCAAGGCTACTGGAAGAATCA CCCAAGTGCTTGGCCAGTTACGAGCTTGAGCATTGGTGGTGTGGTTTACAGCCAAAGCCAATTGATGGCAATTTTCAACA CCTCGCCACGTGGTGATGCCACCTACATCTTGGCTCACCAATTGATCGCGGCCAAGTTGAATGTTGCTCAAGGTGCTAAT GGCAGCACAGTTAATGCAACGATCGCTGCTGCTGACGCTTGGTTGCAACAATATCCATTGGGCAGCAAACCAAGTGGCTC AGCCTCCAACACTGGCACCAGCTACGCCACTCAATTGGATAACTTCAACAATGGCGTAATTGGCCCAGGCCACTGCGACT AA
Upstream 100 bases:
>100_bases ACAATTCAATGACATTATACTAGCTAGTAGCTTCGTTTATTTTTATGGTTTAACTAATTTATTATTTTTTTTAACTATTT TTTAATTGTAAGGAGTTCTT
Downstream 100 bases:
>100_bases GCTCAACCCTGAATAATTGTTCAAACGGCGACGATCTAGTATTTCTAGATCGTCGCCGTTTTTCGTTATAATAGCCTGCA TTGTTTGTGATTGAGGTTGA
Product: PT repeat-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MTPTLRRWTTRVVLLATMLMAGGPSASFANVSKGVESASVETVVEPTAEPTAEPTAELTAEPTAEPTGTAAPTAAPTGTA APTAAPVCDPKADLSGWFSSNTVGKIWNKSSTCSYDVGMASYQKFDEIIDHQLIYSWAIGRVGPKTTVSLSVSVPDCATQ IDVFYGPVLHSLDGQRYGERLLSSRHLGGTSYCGVTTPTNTPEPTAEPTVAPTNTPEPTAYPTPTAEPTVAPTNTPEPTA EPTVAPTNTPEPTVAPTVAPTNTPEPTVAPTNTPEPTAYPTPTAVPTATKTPVPTATKTPAPTATSTPAPTATKTPVPTA TKTPAPTATSTPTGKDCTYTQGYWKNHPSAWPVTSLSIGGVVYSQSQLMAIFNTSPRGDATYILAHQLIAAKLNVAQGAN GSTVNATIAAADAWLQQYPLGSKPSGSASNTGTSYATQLDNFNNGVIGPGHCD
Sequences:
>Translated_453_residues MTPTLRRWTTRVVLLATMLMAGGPSASFANVSKGVESASVETVVEPTAEPTAEPTAELTAEPTAEPTGTAAPTAAPTGTA APTAAPVCDPKADLSGWFSSNTVGKIWNKSSTCSYDVGMASYQKFDEIIDHQLIYSWAIGRVGPKTTVSLSVSVPDCATQ IDVFYGPVLHSLDGQRYGERLLSSRHLGGTSYCGVTTPTNTPEPTAEPTVAPTNTPEPTAYPTPTAEPTVAPTNTPEPTA EPTVAPTNTPEPTVAPTVAPTNTPEPTVAPTNTPEPTAYPTPTAVPTATKTPVPTATKTPAPTATSTPAPTATKTPVPTA TKTPAPTATSTPTGKDCTYTQGYWKNHPSAWPVTSLSIGGVVYSQSQLMAIFNTSPRGDATYILAHQLIAAKLNVAQGAN GSTVNATIAAADAWLQQYPLGSKPSGSASNTGTSYATQLDNFNNGVIGPGHCD >Mature_452_residues TPTLRRWTTRVVLLATMLMAGGPSASFANVSKGVESASVETVVEPTAEPTAEPTAELTAEPTAEPTGTAAPTAAPTGTAA PTAAPVCDPKADLSGWFSSNTVGKIWNKSSTCSYDVGMASYQKFDEIIDHQLIYSWAIGRVGPKTTVSLSVSVPDCATQI DVFYGPVLHSLDGQRYGERLLSSRHLGGTSYCGVTTPTNTPEPTAEPTVAPTNTPEPTAYPTPTAEPTVAPTNTPEPTAE PTVAPTNTPEPTVAPTVAPTNTPEPTVAPTNTPEPTAYPTPTAVPTATKTPVPTATKTPAPTATSTPAPTATKTPVPTAT KTPAPTATSTPTGKDCTYTQGYWKNHPSAWPVTSLSIGGVVYSQSQLMAIFNTSPRGDATYILAHQLIAAKLNVAQGANG STVNATIAAADAWLQQYPLGSKPSGSASNTGTSYATQLDNFNNGVIGPGHCD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46634; Mature: 46503
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTLRRWTTRVVLLATMLMAGGPSASFANVSKGVESASVETVVEPTAEPTAEPTAELTA CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHCHHHEECCCCCCCCCCCHHCCC EPTAEPTGTAAPTAAPTGTAAPTAAPVCDPKADLSGWFSSNTVGKIWNKSSTCSYDVGMA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHCCCCCCCEECCCHH SYQKFDEIIDHQLIYSWAIGRVGPKTTVSLSVSVPDCATQIDVFYGPVLHSLDGQRYGER HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHH LLSSRHLGGTSYCGVTTPTNTPEPTAEPTVAPTNTPEPTAYPTPTAEPTVAPTNTPEPTA HHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EPTVAPTNTPEPTVAPTVAPTNTPEPTVAPTNTPEPTAYPTPTAVPTATKTPVPTATKTP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APTATSTPAPTATKTPVPTATKTPAPTATSTPTGKDCTYTQGYWKNHPSAWPVTSLSIGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCEEEEEECC VVYSQSQLMAIFNTSPRGDATYILAHQLIAAKLNVAQGANGSTVNATIAAADAWLQQYPL EEECCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCC GSKPSGSASNTGTSYATQLDNFNNGVIGPGHCD CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TPTLRRWTTRVVLLATMLMAGGPSASFANVSKGVESASVETVVEPTAEPTAEPTAELTA CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHCHHHEECCCCCCCCCCCHHCCC EPTAEPTGTAAPTAAPTGTAAPTAAPVCDPKADLSGWFSSNTVGKIWNKSSTCSYDVGMA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHCCCCCCCEECCCHH SYQKFDEIIDHQLIYSWAIGRVGPKTTVSLSVSVPDCATQIDVFYGPVLHSLDGQRYGER HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHH LLSSRHLGGTSYCGVTTPTNTPEPTAEPTVAPTNTPEPTAYPTPTAEPTVAPTNTPEPTA HHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EPTVAPTNTPEPTVAPTVAPTNTPEPTVAPTNTPEPTAYPTPTAVPTATKTPVPTATKTP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APTATSTPAPTATKTPVPTATKTPAPTATSTPTGKDCTYTQGYWKNHPSAWPVTSLSIGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCEEEEEECC VVYSQSQLMAIFNTSPRGDATYILAHQLIAAKLNVAQGANGSTVNATIAAADAWLQQYPL EEECCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCC GSKPSGSASNTGTSYATQLDNFNNGVIGPGHCD CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA