Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is malE [H]
Identifier: 159900976
GI number: 159900976
Start: 5707502
End: 5708737
Strand: Direct
Name: malE [H]
Synonym: Haur_4463
Alternate gene names: 159900976
Gene position: 5707502-5708737 (Clockwise)
Preceding gene: 159900971
Following gene: 159900977
Centisome position: 89.93
GC content: 51.62
Gene sequence:
>1236_bases ATGAGGGCAGTATGGCGGTATTTTAGCCTTTTTATGATTGGGATTCTCATTGTTGCTGGTTGTAGCACGACAAGCTATGA TAACACTTTGTTAACCCCAGGGGCTACCGCTAATCCTCCCGCACGCACGCAACTGGTCATTTGGCATGGAGCCGATGCCC AACGGAGTGAACTTTTCACCCGATTGCTGTTAGAATATCAACGTGAGCATCCAAACGTTGTCATTCAAATCGTCAATCGT GGGGCAAACCTGCTACACGATTATCGTGCGGCCCTGCTTGAAGGCACACCACCAGACCTGATCTGGCTCAACGAAAATCG TTGGGTAGGGGAACTGGCAGATCAACAGCTTATCATCGATCTGACAGAACGACTAAGCGACGAGAACCTTGAGTCAATTG CGCCAGCTGCGCTTGATGGTGCCCGCTATGGCGAGAAATTATATGGCTTGCCATTGACGCTAGATCTACCTGTGCTGTAC TATAATCGTGCAAACTTTGTGAGCACACCGCCGCAAAGCACTGCTGAATGGCTTGAGATCGCTCGCGGGTTTAGCGATGA TCAAGGACAGTACGGATTAGCGTATAATTTATCGCTATACTTTACCCAACCCTACCTCCCAGCCTTCGGAGGCGCAATCT TCGATACTACTGGCGAGGTCGTGCTGGGAACCCAAAGCTATACCCCAACATTACAGTGGTTGACGTGGGTTGACGAATTA GCCCAAGACCCACGCTTGTTAGCCCGTGATGATCATCGACTGGTAGCTCGCAGCGTGAGCCAAAACAGTGCGATCATGAC GATTGACTGGGCAGATCAAATCGGAACCTATCGTCAATTGTGGGGGGAGAACGTTGGCGTGCAACCATTGCCACGCCTGA GCCAAACCGGCCAAGAACCGCAACCCTTTGTTCGGAGCAGCGTGCTTGTGATCAGCCCACGCAGCACTGAACAACAGCAA AACGCCGCGCTTGACGTGATGCGGTTTCTTGTGGAGATGAAAGCGCAAACGGCTTTTCAAGCCGCTGATATACCAAGCGT CCGAATCGACTTAGCCAGTGTCGATCCACTTTACACTCAAATTCAACTGGCGGTTAGTCGAGCCAGCGCTTGGCCCACCA CCCTTCGTTTCAACAACGGATGGGATATCCTGATCGCTTTGGTGCGTAATAGCTTAAACGGCGCACCCTTGGAAGAAAGT ATCGCGAATGCCGATCGCCTGCTACGGAGCGAGTAG
Upstream 100 bases:
>100_bases GTCAGTAATGCCTGAGCATGGTATACTTTTGGTGATTCGTTGGCGTTTTATGCCTTTATAATCAGATAAAACGCAATTAA CGAAAGAACGGGATATACCC
Downstream 100 bases:
>100_bases CCAACCCAGCATATTACAGTAACCGCTTGACAAGCAAGGGCTAAATTAGCCCGTTGTGGTGCGATCTGTAGTTGATATTT GGCAAAAGATGTAGTAGAAT
Product: extracellular solute-binding protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: MMBP; Maltodextrin-binding protein [H]
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MRAVWRYFSLFMIGILIVAGCSTTSYDNTLLTPGATANPPARTQLVIWHGADAQRSELFTRLLLEYQREHPNVVIQIVNR GANLLHDYRAALLEGTPPDLIWLNENRWVGELADQQLIIDLTERLSDENLESIAPAALDGARYGEKLYGLPLTLDLPVLY YNRANFVSTPPQSTAEWLEIARGFSDDQGQYGLAYNLSLYFTQPYLPAFGGAIFDTTGEVVLGTQSYTPTLQWLTWVDEL AQDPRLLARDDHRLVARSVSQNSAIMTIDWADQIGTYRQLWGENVGVQPLPRLSQTGQEPQPFVRSSVLVISPRSTEQQQ NAALDVMRFLVEMKAQTAFQAADIPSVRIDLASVDPLYTQIQLAVSRASAWPTTLRFNNGWDILIALVRNSLNGAPLEES IANADRLLRSE
Sequences:
>Translated_411_residues MRAVWRYFSLFMIGILIVAGCSTTSYDNTLLTPGATANPPARTQLVIWHGADAQRSELFTRLLLEYQREHPNVVIQIVNR GANLLHDYRAALLEGTPPDLIWLNENRWVGELADQQLIIDLTERLSDENLESIAPAALDGARYGEKLYGLPLTLDLPVLY YNRANFVSTPPQSTAEWLEIARGFSDDQGQYGLAYNLSLYFTQPYLPAFGGAIFDTTGEVVLGTQSYTPTLQWLTWVDEL AQDPRLLARDDHRLVARSVSQNSAIMTIDWADQIGTYRQLWGENVGVQPLPRLSQTGQEPQPFVRSSVLVISPRSTEQQQ NAALDVMRFLVEMKAQTAFQAADIPSVRIDLASVDPLYTQIQLAVSRASAWPTTLRFNNGWDILIALVRNSLNGAPLEES IANADRLLRSE >Mature_411_residues MRAVWRYFSLFMIGILIVAGCSTTSYDNTLLTPGATANPPARTQLVIWHGADAQRSELFTRLLLEYQREHPNVVIQIVNR GANLLHDYRAALLEGTPPDLIWLNENRWVGELADQQLIIDLTERLSDENLESIAPAALDGARYGEKLYGLPLTLDLPVLY YNRANFVSTPPQSTAEWLEIARGFSDDQGQYGLAYNLSLYFTQPYLPAFGGAIFDTTGEVVLGTQSYTPTLQWLTWVDEL AQDPRLLARDDHRLVARSVSQNSAIMTIDWADQIGTYRQLWGENVGVQPLPRLSQTGQEPQPFVRSSVLVISPRSTEQQQ NAALDVMRFLVEMKAQTAFQAADIPSVRIDLASVDPLYTQIQLAVSRASAWPTTLRFNNGWDILIALVRNSLNGAPLEES IANADRLLRSE
Specific function: Involved in an abc transport system for maltotriose [H]
COG id: COG2182
COG function: function code G; Maltose-binding periplasmic proteins/domains
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006060 - InterPro: IPR006059 - InterPro: IPR006061 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 45991; Mature: 45991
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVWRYFSLFMIGILIVAGCSTTSYDNTLLTPGATANPPARTQLVIWHGADAQRSELFT CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCHHHHHHH RLLLEYQREHPNVVIQIVNRGANLLHDYRAALLEGTPPDLIWLNENRWVGELADQQLIID HHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHCCCHHHHH LTERLSDENLESIAPAALDGARYGEKLYGLPLTLDLPVLYYNRANFVSTPPQSTAEWLEI HHHHCCCCCHHHHCHHHHHHHHHCHHHCCCCEEEECCEEEECCCCCCCCCCCHHHHHHHH ARGFSDDQGQYGLAYNLSLYFTQPYLPAFGGAIFDTTGEVVLGTQSYTPTLQWLTWVDEL HCCCCCCCCCEEEEEEEEEEEECCCCHHHCCEEECCCCCEEECCCCCCCHHHHHHHHHHH AQDPRLLARDDHRLVARSVSQNSAIMTIDWADQIGTYRQLWGENVGVQPLPRLSQTGQEP HCCCCEECCCCHHHHHHHHCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC QPFVRSSVLVISPRSTEQQQNAALDVMRFLVEMKAQTAFQAADIPSVRIDLASVDPLYTQ CCHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHH IQLAVSRASAWPTTLRFNNGWDILIALVRNSLNGAPLEESIANADRLLRSE HHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MRAVWRYFSLFMIGILIVAGCSTTSYDNTLLTPGATANPPARTQLVIWHGADAQRSELFT CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCHHHHHHH RLLLEYQREHPNVVIQIVNRGANLLHDYRAALLEGTPPDLIWLNENRWVGELADQQLIID HHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHCCCHHHHH LTERLSDENLESIAPAALDGARYGEKLYGLPLTLDLPVLYYNRANFVSTPPQSTAEWLEI HHHHCCCCCHHHHCHHHHHHHHHCHHHCCCCEEEECCEEEECCCCCCCCCCCHHHHHHHH ARGFSDDQGQYGLAYNLSLYFTQPYLPAFGGAIFDTTGEVVLGTQSYTPTLQWLTWVDEL HCCCCCCCCCEEEEEEEEEEEECCCCHHHCCEEECCCCCEEECCCCCCCHHHHHHHHHHH AQDPRLLARDDHRLVARSVSQNSAIMTIDWADQIGTYRQLWGENVGVQPLPRLSQTGQEP HCCCCEECCCCHHHHHHHHCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC QPFVRSSVLVISPRSTEQQQNAALDVMRFLVEMKAQTAFQAADIPSVRIDLASVDPLYTQ CCHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHH IQLAVSRASAWPTTLRFNNGWDILIALVRNSLNGAPLEESIANADRLLRSE HHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]