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The map label for this gene is 159900001

Identifier: 159900001

GI number: 159900001

Start: 4386641

End: 4387996

Strand: Direct

Name: 159900001

Synonym: Haur_3484

Alternate gene names: NA

Gene position: 4386641-4387996 (Clockwise)

Preceding gene: 159899998

Following gene: 159900004

Centisome position: 69.12

GC content: 51.4

Gene sequence:

>1356_bases
ATGAACATGCTCGATCTGAACCAAGTTGATCAAGCCGCCATGCTCAGCCTTGCCCGCAACCCCCAAACCGACCCACAACA
ATTAATTGCGCTTACCGAGTGGCTTAAACTCCAACAAGGCGCTGATTCGGCTCAGCCTAGCACGAGTTTCGCTTACCTCA
AGAGCCAAGCACCGCAAGGCCCACTGGCAGTTATCTTAGAACGCCGAACCTCGCCGCTACTCGAAGCCTTGATTGCCAAC
CCCAATCTTCCGCCAATGCTGGCTTTAGAATTTGCCGCCGATGTGCCAGCTGCATTTTTTGCCAATCCGGCATTGCCCAT
ATGGTTGCAACACGATCCTGCGTTGTTTAAGCGTATGGAACCACTACGCTGTATGCAGTTTTTAAGCTATCCAGCTATTC
CCCAAGTTATTTTAGCGTCGATTCAAAGCATTAGCCCTGAAATTGCTCAAACCGTGCACCTGCATAGTGCTTCAAATCCT
CAGCTTGATGCCGATTGGTATGCCGACTATCAGCATTACAGAGAGCAAGTGGCCTTGCCCGATGCCACAGCAACAACATT
ACTGCAAGAATTAATTGGCTTGAATGCGATTAATCAGCCGATGTTGAGCTGGCTACGCCAATCACCAGCCGAGCAGCATC
AAGCCTTATTTAATCGAGCGCCAGCTACGCCACAGCCTGTGATTGAGCCACAAACGCTTAACTTTACCCCAAACTATCCA
CGATTGCTCGAATCTCCGTTGGCCGAACGAATTCAAGTAGCGCATTCCAATGATATTAAGGGCTTGGCAATTTTGGCTGA
AGACGACGATCTTAGCATTCGACTGCTAGTGGCCCAAAATCCGGCAACTCCGCGGACTGTTCATCAACTACTGGAGCTTG
ATGATTCGCAGCATGTGCGAGCGGCACTAGCGCGGAATCCCAACATTAGCCCAAAATTACTGCTGACACTAGCGCGTGAT
TACACGTGGTCGGCAGTGCCAATTCGTGTGGCAGCAGCCCTCAATCCAGTCGCAACTTCCGAAATTCTAGAGTTGCTGGC
CCAAGATCAAGCCTCGTTGGTACGTCAAACGGTTGGGCAAAACCCGCAGGCCTCAGCTGAAATACTTGATCATGCCCGCC
AGCGAGCACTAATCGAAGCCCTGTATGCGCTCGATCCCTGGCTGCATATGCTGGCATTGGGAAACCCCGCGACCCCAATT
GAGCATTTGGCGAAGGGCGCTCGCTCCCCGTGGTGGTTGGGGCGAGCAGCTTTAGCCGAAAACCCGAGTTGCCCAAGCAA
TGTGCTTGAGCAATTGACCAATGACGGAAATTGCTATGTGCAACGCTTGGCACAAACTCAATTGAATGCTCGTTAA

Upstream 100 bases:

>100_bases
ACCGCAGGGTCAAACGATTTGAGCTAAACATGGGGTATACTCCAGTGTAATTAAGCAGCGCTGATTGTAGCACGGTATCA
GCAATTTTGGGGTGAGAGGA

Downstream 100 bases:

>100_bases
ATAACAACGAGCCGCGATCAGAAAATCGCAGCTCGTTGCAACAGATTGCTTATTGCCAATAGCCGATCATCAAATCGCCG
CCACGGGTCGGAATCCCGCT

Product: leucine-rich repeat-containing protein

Products: NA

Alternate protein names: Leucine Rich Repeat Variant

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MNMLDLNQVDQAAMLSLARNPQTDPQQLIALTEWLKLQQGADSAQPSTSFAYLKSQAPQGPLAVILERRTSPLLEALIAN
PNLPPMLALEFAADVPAAFFANPALPIWLQHDPALFKRMEPLRCMQFLSYPAIPQVILASIQSISPEIAQTVHLHSASNP
QLDADWYADYQHYREQVALPDATATTLLQELIGLNAINQPMLSWLRQSPAEQHQALFNRAPATPQPVIEPQTLNFTPNYP
RLLESPLAERIQVAHSNDIKGLAILAEDDDLSIRLLVAQNPATPRTVHQLLELDDSQHVRAALARNPNISPKLLLTLARD
YTWSAVPIRVAAALNPVATSEILELLAQDQASLVRQTVGQNPQASAEILDHARQRALIEALYALDPWLHMLALGNPATPI
EHLAKGARSPWWLGRAALAENPSCPSNVLEQLTNDGNCYVQRLAQTQLNAR

Sequences:

>Translated_451_residues
MNMLDLNQVDQAAMLSLARNPQTDPQQLIALTEWLKLQQGADSAQPSTSFAYLKSQAPQGPLAVILERRTSPLLEALIAN
PNLPPMLALEFAADVPAAFFANPALPIWLQHDPALFKRMEPLRCMQFLSYPAIPQVILASIQSISPEIAQTVHLHSASNP
QLDADWYADYQHYREQVALPDATATTLLQELIGLNAINQPMLSWLRQSPAEQHQALFNRAPATPQPVIEPQTLNFTPNYP
RLLESPLAERIQVAHSNDIKGLAILAEDDDLSIRLLVAQNPATPRTVHQLLELDDSQHVRAALARNPNISPKLLLTLARD
YTWSAVPIRVAAALNPVATSEILELLAQDQASLVRQTVGQNPQASAEILDHARQRALIEALYALDPWLHMLALGNPATPI
EHLAKGARSPWWLGRAALAENPSCPSNVLEQLTNDGNCYVQRLAQTQLNAR
>Mature_451_residues
MNMLDLNQVDQAAMLSLARNPQTDPQQLIALTEWLKLQQGADSAQPSTSFAYLKSQAPQGPLAVILERRTSPLLEALIAN
PNLPPMLALEFAADVPAAFFANPALPIWLQHDPALFKRMEPLRCMQFLSYPAIPQVILASIQSISPEIAQTVHLHSASNP
QLDADWYADYQHYREQVALPDATATTLLQELIGLNAINQPMLSWLRQSPAEQHQALFNRAPATPQPVIEPQTLNFTPNYP
RLLESPLAERIQVAHSNDIKGLAILAEDDDLSIRLLVAQNPATPRTVHQLLELDDSQHVRAALARNPNISPKLLLTLARD
YTWSAVPIRVAAALNPVATSEILELLAQDQASLVRQTVGQNPQASAEILDHARQRALIEALYALDPWLHMLALGNPATPI
EHLAKGARSPWWLGRAALAENPSCPSNVLEQLTNDGNCYVQRLAQTQLNAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49730; Mature: 49730

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMLDLNQVDQAAMLSLARNPQTDPQQLIALTEWLKLQQGADSAQPSTSFAYLKSQAPQG
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCC
PLAVILERRTSPLLEALIANPNLPPMLALEFAADVPAAFFANPALPIWLQHDPALFKRME
CHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHCCCCCEEEECCCHHHHHHCC
PLRCMQFLSYPAIPQVILASIQSISPEIAQTVHLHSASNPQLDADWYADYQHYREQVALP
HHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC
DATATTLLQELIGLNAINQPMLSWLRQSPAEQHQALFNRAPATPQPVIEPQTLNFTPNYP
CHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCH
RLLESPLAERIQVAHSNDIKGLAILAEDDDLSIRLLVAQNPATPRTVHQLLELDDSQHVR
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCCHHHH
AALARNPNISPKLLLTLARDYTWSAVPIRVAAALNPVATSEILELLAQDQASLVRQTVGQ
HHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC
NPQASAEILDHARQRALIEALYALDPWLHMLALGNPATPIEHLAKGARSPWWLGRAALAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHCHHHHCC
NPSCPSNVLEQLTNDGNCYVQRLAQTQLNAR
CCCCHHHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNMLDLNQVDQAAMLSLARNPQTDPQQLIALTEWLKLQQGADSAQPSTSFAYLKSQAPQG
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCC
PLAVILERRTSPLLEALIANPNLPPMLALEFAADVPAAFFANPALPIWLQHDPALFKRME
CHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHCCCCCEEEECCCHHHHHHCC
PLRCMQFLSYPAIPQVILASIQSISPEIAQTVHLHSASNPQLDADWYADYQHYREQVALP
HHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC
DATATTLLQELIGLNAINQPMLSWLRQSPAEQHQALFNRAPATPQPVIEPQTLNFTPNYP
CHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCH
RLLESPLAERIQVAHSNDIKGLAILAEDDDLSIRLLVAQNPATPRTVHQLLELDDSQHVR
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCCHHHH
AALARNPNISPKLLLTLARDYTWSAVPIRVAAALNPVATSEILELLAQDQASLVRQTVGQ
HHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC
NPQASAEILDHARQRALIEALYALDPWLHMLALGNPATPIEHLAKGARSPWWLGRAALAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHCHHHHCC
NPSCPSNVLEQLTNDGNCYVQRLAQTQLNAR
CCCCHHHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA