Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899998
Identifier: 159899998
GI number: 159899998
Start: 4384862
End: 4385293
Strand: Direct
Name: 159899998
Synonym: Haur_3481
Alternate gene names: NA
Gene position: 4384862-4385293 (Clockwise)
Preceding gene: 159899997
Following gene: 159900001
Centisome position: 69.09
GC content: 50.23
Gene sequence:
>432_bases ATGAGTAATCCACTGCTCGATCAAACCAATCTGGTAGTGCAATTGTGCATCACGGGAACCCAAGCCGAAATGCACGATCG AATTGGGGCAGCCCAGGCGGCTTATCAACAAGCTTGGGCTGTTGCTCAAACAGCGTTAGATCGTTGTATCGCGGCCCATT ATTGTGCACGGCATCAACCACTTGCCACGATGCTCGAATGGAATCAAATCGCCCTTGAAGAGGCTAAATTGGTGGAATCA AGCGCAATCAGCGAATTTCTGCCTTCGCTGTATTTAAATTTGGCTTGGTCGTATGAGCAAAATGCCCAACTCGACCAAGC CTTGGAGCAGTATCAAGCGTGTTTGACCAGTTTGGCTGCATTGGCCGAAGGTTCCTATCGCACGATGATCAACGATAGTG CGCTGGCAGCCTTGCAACGGCTAGATCGGTAG
Upstream 100 bases:
>100_bases GAGGCGGGCTGGCTCACTCCATTCATTTGGCTGTTTGCCCAGGTGTTTTATCGGCATCGTCAGCGCCGTTGGCGGCGCTT GGCAGCAAGGCATTTTCGCT
Downstream 100 bases:
>100_bases CGTCCAATCGTAGCGCACCGCACCCAAACGCATCGCCGCAGTAATTCCAGTACAAACTAAAACTGCTAAGGCATCAAAGC CGAGATAGGTACATAAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSNPLLDQTNLVVQLCITGTQAEMHDRIGAAQAAYQQAWAVAQTALDRCIAAHYCARHQPLATMLEWNQIALEEAKLVES SAISEFLPSLYLNLAWSYEQNAQLDQALEQYQACLTSLAALAEGSYRTMINDSALAALQRLDR
Sequences:
>Translated_143_residues MSNPLLDQTNLVVQLCITGTQAEMHDRIGAAQAAYQQAWAVAQTALDRCIAAHYCARHQPLATMLEWNQIALEEAKLVES SAISEFLPSLYLNLAWSYEQNAQLDQALEQYQACLTSLAALAEGSYRTMINDSALAALQRLDR >Mature_142_residues SNPLLDQTNLVVQLCITGTQAEMHDRIGAAQAAYQQAWAVAQTALDRCIAAHYCARHQPLATMLEWNQIALEEAKLVESS AISEFLPSLYLNLAWSYEQNAQLDQALEQYQACLTSLAALAEGSYRTMINDSALAALQRLDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15830; Mature: 15699
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPLLDQTNLVVQLCITGTQAEMHDRIGAAQAAYQQAWAVAQTALDRCIAAHYCARHQP CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LATMLEWNQIALEEAKLVESSAISEFLPSLYLNLAWSYEQNAQLDQALEQYQACLTSLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LAEGSYRTMINDSALAALQRLDR HHCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNPLLDQTNLVVQLCITGTQAEMHDRIGAAQAAYQQAWAVAQTALDRCIAAHYCARHQP CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LATMLEWNQIALEEAKLVESSAISEFLPSLYLNLAWSYEQNAQLDQALEQYQACLTSLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LAEGSYRTMINDSALAALQRLDR HHCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA