The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899996

Identifier: 159899996

GI number: 159899996

Start: 4383578

End: 4384027

Strand: Direct

Name: 159899996

Synonym: Haur_3479

Alternate gene names: NA

Gene position: 4383578-4384027 (Clockwise)

Preceding gene: 159899991

Following gene: 159899997

Centisome position: 69.07

GC content: 47.56

Gene sequence:

>450_bases
ATGCGTAAGGGATTTTTGCTGCTCGTTTTGACCTCCGTTTTAGCAGCATGCGGCACCGCAGAAAGCACACCAACCACCGT
TCCTACGGCCACCGTTGCTGCAACTCCCACTACCGATAGCGCAGCCTACCCCACCCCTGATCTTGCGCAAAGCGAGATTA
ACCCAATGATGATCGAAAGTGTTGCAGTTTCGGTTAAAGAATCAATGCCGCCCCAAGTATCGGTTGAAATTAACGGCATG
CTCAACGATGGTTGTACTTCTTTCCACGAAGCCAAACAATCGATCGACGGCAACACCATCAAAATTGAAGTCACAACAAT
TCGCCCTAAAGATGCCATGTGCAACCAACAGATCTCGCCATTTAGCACAATTATTCAAATCGAGGGCGAGCTAAAGCCAG
GTGAATATACGATTTTAGTCAATGATGTCGCCGAAGCGCTTAAATTGTAA

Upstream 100 bases:

>100_bases
TTCGTGGATCGACAGAGGCAGGAACAAAATCTGCTATGCTAACGTTGAATCTAGTAAGCACGTTGGCACAAGGCCAGCCT
GATTAAAGGAGTTTTACCGA

Downstream 100 bases:

>100_bases
ACTTGCAGATAACGTATTATGCAGCGGGGAGCTTTGGCTCTCCGCATTTGGTTTAATCTGAATGTTATTGAGGCTCGGAA
AAATAGTAGATTCGACGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF11; ORFC [H]

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MRKGFLLLVLTSVLAACGTAESTPTTVPTATVAATPTTDSAAYPTPDLAQSEINPMMIESVAVSVKESMPPQVSVEINGM
LNDGCTSFHEAKQSIDGNTIKIEVTTIRPKDAMCNQQISPFSTIIQIEGELKPGEYTILVNDVAEALKL

Sequences:

>Translated_149_residues
MRKGFLLLVLTSVLAACGTAESTPTTVPTATVAATPTTDSAAYPTPDLAQSEINPMMIESVAVSVKESMPPQVSVEINGM
LNDGCTSFHEAKQSIDGNTIKIEVTTIRPKDAMCNQQISPFSTIIQIEGELKPGEYTILVNDVAEALKL
>Mature_149_residues
MRKGFLLLVLTSVLAACGTAESTPTTVPTATVAATPTTDSAAYPTPDLAQSEINPMMIESVAVSVKESMPPQVSVEINGM
LNDGCTSFHEAKQSIDGNTIKIEVTTIRPKDAMCNQQISPFSTIIQIEGELKPGEYTILVNDVAEALKL

Specific function: Could be a silencing control element for the regulation of the restriction system [H]

COG id: COG5513

COG function: function code S; Predicted secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15812; Mature: 15812

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKGFLLLVLTSVLAACGTAESTPTTVPTATVAATPTTDSAAYPTPDLAQSEINPMMIES
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHCCCHHHHHH
VAVSVKESMPPQVSVEINGMLNDGCTSFHEAKQSIDGNTIKIEVTTIRPKDAMCNQQISP
HHHHHHHCCCCEEEEEECCEECCCHHHHHHHHHHCCCCEEEEEEEEECCCHHHHCCCCCC
FSTIIQIEGELKPGEYTILVNDVAEALKL
CEEEEEEECCCCCCCEEEEHHHHHHHHCC
>Mature Secondary Structure
MRKGFLLLVLTSVLAACGTAESTPTTVPTATVAATPTTDSAAYPTPDLAQSEINPMMIES
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHCCCHHHHHH
VAVSVKESMPPQVSVEINGMLNDGCTSFHEAKQSIDGNTIKIEVTTIRPKDAMCNQQISP
HHHHHHHCCCCEEEEEECCEECCCHHHHHHHHHHCCCCEEEEEEEEECCCHHHHCCCCCC
FSTIIQIEGELKPGEYTILVNDVAEALKL
CEEEEEEECCCCCCCEEEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1644308; 7607523 [H]