Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899920
Identifier: 159899920
GI number: 159899920
Start: 4285939
End: 4286736
Strand: Direct
Name: 159899920
Synonym: Haur_3403
Alternate gene names: NA
Gene position: 4285939-4286736 (Clockwise)
Preceding gene: 159899919
Following gene: 159899928
Centisome position: 67.53
GC content: 50.63
Gene sequence:
>798_bases ATGGATTTGCTTGATGCAATTCGTTCGCGCCGCACCACCAACGGCCCATTTGAAGATCGCCCGCTCGATCCGACCCATGT CCAAACCATTTTGGAGATGGCGGCTTGTGCTCCCTCGCACTTCAATTCGCAGCCTTGGCGTTTCGTGGTGATTCAAGATC AAACGACGCGCATGCAATTGGCCGAGATTGCAGGTGAATCGATGCAGAAATTAATGGCGGGGGGCCGCTTCTGGCAACGC TATCGCAAATATTTTCGTTTCTCCAAGCAAGAAGTTGATCAACGGGGCGATGGGATTTTGATCGACAATATGCCAGCAAT TTTAAAACCATTTGCTAAATATATCTTTACTGAGCGTGGCGGCGAGTTGATGGCCAAATTTCAAGTGCCCAAAGTGCTCG GCAAAGATGCTCGGAAATTAGTCGCTGGTTCGCCCTTGATTTTGGGGATTACGCTCGATAAAAGCGAATACAAACCCGAT GATTTATCGGGCATGTACTCGCTACTTTCCTTGGGCGCGGTGATGCAAACGATTTGGCTGACTGCAACATCGTTGGGCAT TGGCATGCAATTTATCTCGACCCCGATGGAAGTTGAGGGCCAATGGGAGAAAATCACCAAGCTGTTGCAAATTCCTGATG AACATAGCTTGATGGTGCTGTATCGCTTGGGCTATATCCCGCAGGCCGCCGACCGCCCAACGATCGATTGGACCTCATCG CAGCGCAAACGCACAGCGGCTTTAGCCTATGCCAATCGTTGGGACCAACCGTTTGAGCCAGCAACCAAGCCCGATTAA
Upstream 100 bases:
>100_bases TGCGCCAACGGCTCAGCCGCTTGATTAGCAGTGGCAAATTTCCCGCCTCGTATGGGCAGCGCTCAATTCCATGGCCGCCC GTTTAGACAAGGAAGTCTCT
Downstream 100 bases:
>100_bases TTATAGTTGGGGATGCGTTGCAAGCCTTCTTGCAAGGTCGCCGAGGTACTAATTGAATCCAATTCAAGCCCTAACGAAAC CATGGCTTGGGCAACTTCAG
Product: nitroreductase
Products: NA
Alternate protein names: Cob(II)Yrinic Acid A C-Diamide Reductase
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MDLLDAIRSRRTTNGPFEDRPLDPTHVQTILEMAACAPSHFNSQPWRFVVIQDQTTRMQLAEIAGESMQKLMAGGRFWQR YRKYFRFSKQEVDQRGDGILIDNMPAILKPFAKYIFTERGGELMAKFQVPKVLGKDARKLVAGSPLILGITLDKSEYKPD DLSGMYSLLSLGAVMQTIWLTATSLGIGMQFISTPMEVEGQWEKITKLLQIPDEHSLMVLYRLGYIPQAADRPTIDWTSS QRKRTAALAYANRWDQPFEPATKPD
Sequences:
>Translated_265_residues MDLLDAIRSRRTTNGPFEDRPLDPTHVQTILEMAACAPSHFNSQPWRFVVIQDQTTRMQLAEIAGESMQKLMAGGRFWQR YRKYFRFSKQEVDQRGDGILIDNMPAILKPFAKYIFTERGGELMAKFQVPKVLGKDARKLVAGSPLILGITLDKSEYKPD DLSGMYSLLSLGAVMQTIWLTATSLGIGMQFISTPMEVEGQWEKITKLLQIPDEHSLMVLYRLGYIPQAADRPTIDWTSS QRKRTAALAYANRWDQPFEPATKPD >Mature_265_residues MDLLDAIRSRRTTNGPFEDRPLDPTHVQTILEMAACAPSHFNSQPWRFVVIQDQTTRMQLAEIAGESMQKLMAGGRFWQR YRKYFRFSKQEVDQRGDGILIDNMPAILKPFAKYIFTERGGELMAKFQVPKVLGKDARKLVAGSPLILGITLDKSEYKPD DLSGMYSLLSLGAVMQTIWLTATSLGIGMQFISTPMEVEGQWEKITKLLQIPDEHSLMVLYRLGYIPQAADRPTIDWTSS QRKRTAALAYANRWDQPFEPATKPD
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30148; Mature: 30148
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLLDAIRSRRTTNGPFEDRPLDPTHVQTILEMAACAPSHFNSQPWRFVVIQDQTTRMQL CCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHH AEIAGESMQKLMAGGRFWQRYRKYFRFSKQEVDQRGDGILIDNMPAILKPFAKYIFTERG HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCC GELMAKFQVPKVLGKDARKLVAGSPLILGITLDKSEYKPDDLSGMYSLLSLGAVMQTIWL CCEEHHHHCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH TATSLGIGMQFISTPMEVEGQWEKITKLLQIPDEHSLMVLYRLGYIPQAADRPTIDWTSS HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEHHCCCCCCCCCCCCCCCCH QRKRTAALAYANRWDQPFEPATKPD HHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MDLLDAIRSRRTTNGPFEDRPLDPTHVQTILEMAACAPSHFNSQPWRFVVIQDQTTRMQL CCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHH AEIAGESMQKLMAGGRFWQRYRKYFRFSKQEVDQRGDGILIDNMPAILKPFAKYIFTERG HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCC GELMAKFQVPKVLGKDARKLVAGSPLILGITLDKSEYKPDDLSGMYSLLSLGAVMQTIWL CCEEHHHHCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH TATSLGIGMQFISTPMEVEGQWEKITKLLQIPDEHSLMVLYRLGYIPQAADRPTIDWTSS HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEHHCCCCCCCCCCCCCCCCH QRKRTAALAYANRWDQPFEPATKPD HHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA