Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is resE [H]
Identifier: 159899907
GI number: 159899907
Start: 4273123
End: 4275171
Strand: Direct
Name: resE [H]
Synonym: Haur_3390
Alternate gene names: 159899907
Gene position: 4273123-4275171 (Clockwise)
Preceding gene: 159899906
Following gene: 159899908
Centisome position: 67.33
GC content: 52.27
Gene sequence:
>2049_bases ATGCAGTTACGACCTAAAATTCGCTTACCAACGCTGCTAATCGGCGTAAATTTGGCAGTTTTAATCATTGCCATCGTAGG TATTGCTACGGTGGCGATTGGTTTGTTATTGGAACTGGGCGATGATCAAGGCTTAGCGCGAGTCCGCCAAGGGGTAGCGA TCGCCCAAAACGATGTGCAACGCTCTGGCAACGAGGTATTAACCACCGCCCAACTGTTGGCCGAACGCCCAACCCTCGCT CGCTTGCTGCAAACCAATGATCAGGTTGCCCTTGAAGATTTTTTGGGCCAATTTCAGGCCACCAGCGAACTGGCTGGCTG TGCAATTTATCAAGATGGTCAATTATTGATTGCGGTTGGTACTGAAATTCCAGCCATGCCTGCGCTCGATAATCGCGCAT TATTGCTTGATGGAGCGTTGTTGGGTTTAGCGGCCCGCGTGCCACTTGCCACTGATCCCAGTGTGATCGTTGCAGTTTGG ATTGAGCTTGATCAGCAGTATCAGGCTGAATTATCGACTATTTTGAGTTTACCCGTAGCGATTGTGCCCCAACAACGCCT GACTAACCCCAATGATCCCTTGACTGAAACCCAAGCCGCTGCCTTGACGACCAACACCATTACCGATAGCTACTTGCGCG ATCAACATCACTATATCGCTAGCGCCCCATTATTGGCCAGCACCGGTCAGCCAATTGGTGTGGTCAGTGTGACCTTACCT GATACTCAAATTCGTAATTCGGCGCAGCGGCTTAGCGAAGTTCTGCTGACCATTGCTTTAGTTGGCGGAGTTTTGGCGTT TGGCTTAAATTTGTTGGTTGGGCGCTATGTTGGTTGGCCGTTGCGGCGTTTGACCATGGCCGCCGCCCAAATTGGCCGGG GCGACTTAACCACGCCAGTTGCTCCAGCCAAAGGCGTTGAAGTGGGCATGTTGGCGGGCACATTGGAGGATATGCGCCAG CGTTTGCGTGGCCTGACCGCCGATTTACAACGCCAGCAAGCCGAGGCCAACGCGATTTTGGCTGGCATCGTCGAAGGCGT GTTCACCGTTGATCGTGATCGGCGGATTCGCTATTTGAATCAACAAGCCGCCAGCATGCTTGGTATCGCGCCAGAGCAGG CAATTGGCCGCTTTTGTGGCGATGTATTACAACCGCAATTGGTCGATGGCGTGCGTCCCTGTGAGCAGGCTTGTCCAATT ATTCATGCACGATTTCGCGGCCAAGCTCAAGCAACCGAACATTTGCAATTGCTTGATGGCCGCCGCCGCACAGTGATTAT TACCAGCGCTGGCGATGTTGAGCAAAACCATGTGCAAGTAATGCGCGATGAAACTGATATTGAAACCTCACGGCGCTTGC GTGATACGATTCTCGCCACGATCTCGCACGAATTTCGCACCCCGTTATCAGCCCAATTAGCCTCGTTGGAATTGCTGCTT GATCAATTACCGCAACTTTCGACTGCTCAGATTCGCCAATTAATCGTATCATTACAGCGTGGAGCCTTGCGATTAACCTA TTTGATCGATAATTTACTGGAAAGTGCGCGGATTGAAGCAGGCCAATTGACGATTCGACGCAGCGAAATTGCGCTTGATG GTGTGGTTGAGGCTGCCGTCGAATTGATGTTGCCCTTGATCGAACAGCGCCGCCAGCAGGTCGAGGTCGATTTGCCTTAT CCGCTGCCGAATGTTGCTGGCGATGCCACCCGCCTAACCCAAGTCTTTGTTAATTTGCTAGCCAATGCCAGTAAATTCTC GCCACCAGATACCACAATTGCGATTGGCGGCGAAGTAACCAGCGAACATCTGCTAGTATGGGTCGAGGATGAAGGGCCAG GCATGCCGCCATCGCCCAGCGAATCGCCGTTTCGCTTGTTTGTGCGCGGGCGCAACGAGCCAGAGCAAAGCGGCGCAGGC TTGGGCTTGTGGATTGTTCAATCAATTATTGAGCGTCACAATGGCCGAATTCATGTGCCAGCCCGCAGCCTTGGCACGCG GATTGTGATTGAATTACCCAGAGGAACTGATGAAGATTTTAGTCGTTGA
Upstream 100 bases:
>100_bases TTGGGCTATCGGAACATGGCGTGGGATTGCAACGATTCCAATGGTCAATAGCCTATCACTTCGCGATCTTCGTGGTTTCG GCCTTTGTGGATAATCTTCG
Downstream 100 bases:
>100_bases TGATGATGCTGAATTGCGCGGATTAATTGGTTTTGCCTTGAGCCAAGCAGGCTATGCGGTAGTGCAAGCAGCTGATGGTA CGCAAGCATTAACTCAATTC
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 682; Mature: 682
Protein sequence:
>682_residues MQLRPKIRLPTLLIGVNLAVLIIAIVGIATVAIGLLLELGDDQGLARVRQGVAIAQNDVQRSGNEVLTTAQLLAERPTLA RLLQTNDQVALEDFLGQFQATSELAGCAIYQDGQLLIAVGTEIPAMPALDNRALLLDGALLGLAARVPLATDPSVIVAVW IELDQQYQAELSTILSLPVAIVPQQRLTNPNDPLTETQAAALTTNTITDSYLRDQHHYIASAPLLASTGQPIGVVSVTLP DTQIRNSAQRLSEVLLTIALVGGVLAFGLNLLVGRYVGWPLRRLTMAAAQIGRGDLTTPVAPAKGVEVGMLAGTLEDMRQ RLRGLTADLQRQQAEANAILAGIVEGVFTVDRDRRIRYLNQQAASMLGIAPEQAIGRFCGDVLQPQLVDGVRPCEQACPI IHARFRGQAQATEHLQLLDGRRRTVIITSAGDVEQNHVQVMRDETDIETSRRLRDTILATISHEFRTPLSAQLASLELLL DQLPQLSTAQIRQLIVSLQRGALRLTYLIDNLLESARIEAGQLTIRRSEIALDGVVEAAVELMLPLIEQRRQQVEVDLPY PLPNVAGDATRLTQVFVNLLANASKFSPPDTTIAIGGEVTSEHLLVWVEDEGPGMPPSPSESPFRLFVRGRNEPEQSGAG LGLWIVQSIIERHNGRIHVPARSLGTRIVIELPRGTDEDFSR
Sequences:
>Translated_682_residues MQLRPKIRLPTLLIGVNLAVLIIAIVGIATVAIGLLLELGDDQGLARVRQGVAIAQNDVQRSGNEVLTTAQLLAERPTLA RLLQTNDQVALEDFLGQFQATSELAGCAIYQDGQLLIAVGTEIPAMPALDNRALLLDGALLGLAARVPLATDPSVIVAVW IELDQQYQAELSTILSLPVAIVPQQRLTNPNDPLTETQAAALTTNTITDSYLRDQHHYIASAPLLASTGQPIGVVSVTLP DTQIRNSAQRLSEVLLTIALVGGVLAFGLNLLVGRYVGWPLRRLTMAAAQIGRGDLTTPVAPAKGVEVGMLAGTLEDMRQ RLRGLTADLQRQQAEANAILAGIVEGVFTVDRDRRIRYLNQQAASMLGIAPEQAIGRFCGDVLQPQLVDGVRPCEQACPI IHARFRGQAQATEHLQLLDGRRRTVIITSAGDVEQNHVQVMRDETDIETSRRLRDTILATISHEFRTPLSAQLASLELLL DQLPQLSTAQIRQLIVSLQRGALRLTYLIDNLLESARIEAGQLTIRRSEIALDGVVEAAVELMLPLIEQRRQQVEVDLPY PLPNVAGDATRLTQVFVNLLANASKFSPPDTTIAIGGEVTSEHLLVWVEDEGPGMPPSPSESPFRLFVRGRNEPEQSGAG LGLWIVQSIIERHNGRIHVPARSLGTRIVIELPRGTDEDFSR >Mature_682_residues MQLRPKIRLPTLLIGVNLAVLIIAIVGIATVAIGLLLELGDDQGLARVRQGVAIAQNDVQRSGNEVLTTAQLLAERPTLA RLLQTNDQVALEDFLGQFQATSELAGCAIYQDGQLLIAVGTEIPAMPALDNRALLLDGALLGLAARVPLATDPSVIVAVW IELDQQYQAELSTILSLPVAIVPQQRLTNPNDPLTETQAAALTTNTITDSYLRDQHHYIASAPLLASTGQPIGVVSVTLP DTQIRNSAQRLSEVLLTIALVGGVLAFGLNLLVGRYVGWPLRRLTMAAAQIGRGDLTTPVAPAKGVEVGMLAGTLEDMRQ RLRGLTADLQRQQAEANAILAGIVEGVFTVDRDRRIRYLNQQAASMLGIAPEQAIGRFCGDVLQPQLVDGVRPCEQACPI IHARFRGQAQATEHLQLLDGRRRTVIITSAGDVEQNHVQVMRDETDIETSRRLRDTILATISHEFRTPLSAQLASLELLL DQLPQLSTAQIRQLIVSLQRGALRLTYLIDNLLESARIEAGQLTIRRSEIALDGVVEAAVELMLPLIEQRRQQVEVDLPY PLPNVAGDATRLTQVFVNLLANASKFSPPDTTIAIGGEVTSEHLLVWVEDEGPGMPPSPSESPFRLFVRGRNEPEQSGAG LGLWIVQSIIERHNGRIHVPARSLGTRIVIELPRGTDEDFSR
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786912, Length=214, Percent_Identity=32.7102803738318, Blast_Score=116, Evalue=5e-27, Organism=Escherichia coli, GI1788393, Length=232, Percent_Identity=29.7413793103448, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1786783, Length=220, Percent_Identity=32.7272727272727, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI145693157, Length=283, Percent_Identity=27.9151943462898, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1790346, Length=231, Percent_Identity=30.7359307359307, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1789149, Length=214, Percent_Identity=28.5046728971963, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI87081816, Length=232, Percent_Identity=29.7413793103448, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1788279, Length=195, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI1786600, Length=240, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1790436, Length=241, Percent_Identity=25.3112033195021, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1790300, Length=367, Percent_Identity=24.5231607629428, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI48994928, Length=351, Percent_Identity=21.9373219373219, Blast_Score=66, Evalue=7e-12, Organism=Escherichia coli, GI1790551, Length=224, Percent_Identity=29.0178571428571, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1790861, Length=202, Percent_Identity=28.7128712871287, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 74034; Mature: 74034
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS50885 HAMP ; PS50112 PAS ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLRPKIRLPTLLIGVNLAVLIIAIVGIATVAIGLLLELGDDQGLARVRQGVAIAQNDVQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHH RSGNEVLTTAQLLAERPTLARLLQTNDQVALEDFLGQFQATSELAGCAIYQDGQLLIAVG HCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEECCEEEEEEC TEIPAMPALDNRALLLDGALLGLAARVPLATDPSVIVAVWIELDQQYQAELSTILSLPVA CCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCHH IVPQQRLTNPNDPLTETQAAALTTNTITDSYLRDQHHYIASAPLLASTGQPIGVVSVTLP CCCHHHCCCCCCCCCHHHHHHEEECHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEECC DTQIRNSAQRLSEVLLTIALVGGVLAFGLNLLVGRYVGWPLRRLTMAAAQIGRGDLTTPV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC APAKGVEVGMLAGTLEDMRQRLRGLTADLQRQQAEANAILAGIVEGVFTVDRDRRIRYLN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH QQAASMLGIAPEQAIGRFCGDVLQPQLVDGVRPCEQACPIIHARFRGQAQATEHLQLLDG HHHHHHHCCCHHHHHHHHHHHHCCHHHHHCCCCHHHHCCHHHHHHCCCHHHHHHHHHHCC RRRTVIITSAGDVEQNHVQVMRDETDIETSRRLRDTILATISHEFRTPLSAQLASLELLL CCEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DQLPQLSTAQIRQLIVSLQRGALRLTYLIDNLLESARIEAGQLTIRRSEIALDGVVEAAV HHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHH ELMLPLIEQRRQQVEVDLPYPLPNVAGDATRLTQVFVNLLANASKFSPPDTTIAIGGEVT HHHHHHHHHHHHCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCC SEHLLVWVEDEGPGMPPSPSESPFRLFVRGRNEPEQSGAGLGLWIVQSIIERHNGRIHVP CCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEC ARSLGTRIVIELPRGTDEDFSR HHHCCCEEEEECCCCCCCCCCC >Mature Secondary Structure MQLRPKIRLPTLLIGVNLAVLIIAIVGIATVAIGLLLELGDDQGLARVRQGVAIAQNDVQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHH RSGNEVLTTAQLLAERPTLARLLQTNDQVALEDFLGQFQATSELAGCAIYQDGQLLIAVG HCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEECCEEEEEEC TEIPAMPALDNRALLLDGALLGLAARVPLATDPSVIVAVWIELDQQYQAELSTILSLPVA CCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCHH IVPQQRLTNPNDPLTETQAAALTTNTITDSYLRDQHHYIASAPLLASTGQPIGVVSVTLP CCCHHHCCCCCCCCCHHHHHHEEECHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEECC DTQIRNSAQRLSEVLLTIALVGGVLAFGLNLLVGRYVGWPLRRLTMAAAQIGRGDLTTPV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC APAKGVEVGMLAGTLEDMRQRLRGLTADLQRQQAEANAILAGIVEGVFTVDRDRRIRYLN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH QQAASMLGIAPEQAIGRFCGDVLQPQLVDGVRPCEQACPIIHARFRGQAQATEHLQLLDG HHHHHHHCCCHHHHHHHHHHHHCCHHHHHCCCCHHHHCCHHHHHHCCCHHHHHHHHHHCC RRRTVIITSAGDVEQNHVQVMRDETDIETSRRLRDTILATISHEFRTPLSAQLASLELLL CCEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DQLPQLSTAQIRQLIVSLQRGALRLTYLIDNLLESARIEAGQLTIRRSEIALDGVVEAAV HHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHH ELMLPLIEQRRQQVEVDLPYPLPNVAGDATRLTQVFVNLLANASKFSPPDTTIAIGGEVT HHHHHHHHHHHHCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCC SEHLLVWVEDEGPGMPPSPSESPFRLFVRGRNEPEQSGAGLGLWIVQSIIERHNGRIHVP CCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEC ARSLGTRIVIELPRGTDEDFSR HHHCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]