The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899905

Identifier: 159899905

GI number: 159899905

Start: 4270984

End: 4271763

Strand: Direct

Name: 159899905

Synonym: Haur_3388

Alternate gene names: NA

Gene position: 4270984-4271763 (Clockwise)

Preceding gene: 159899904

Following gene: 159899906

Centisome position: 67.3

GC content: 46.15

Gene sequence:

>780_bases
ATGGCAAAACTTCGACAAATTTGGGCTTGGACACGCTTCATTTGGAGTGAATACCAACGAACAGGGCGTTTTTTAGTTGA
GCTAGGGGCATTAATCATTTTTGCCTATGTCTTTCTGCGCAAACCCAATGTTGATGCTCATCTAACTGCTACCCAGTTCT
TTGGCATGACCGCAATTTTTGTGCTCTGTCAAACAATTTTTACCACCACGATGATGGCAGGCCTTGGTAATCGACCGCAA
GGTTATGTGGTTTTGGCTCGCTCATTAGGCCGCAAAGGCTATTTAGTTGGCCTCTTTTTAGTCGCCTTTTTAATTAGCTT
GGTCAATTTAATCCTCTGTACTATCATCGTCACCATCATCAACAAGCCAGTCTTGTGGGATGCAGTGATTTGGGGCGCGG
GAGCCTTGCCGCTGATTTTAGATATTGCTTTGGTAACGGCCTTGGTGCTTCTCCTTTCAAGTTTGGTGCTTTCACAAGGC
TGGCGCTTGAGCATTTTGGCGGTCATTGCCTTGGCTTCGTTGAGCACCAGCGATATTTTCACCAATACCTTTGATCCGAA
TGGCAGCTTGGGCAAAATTTTGGCAGCAATTCGCACAATTGTTGGCATTCCGCTAACCCCATTGTTTGCAGGCTTTGAGC
TAGCGGTGACGCGCCAAGCCTATGAGAGCAACTTGAATCAAGCTTTGGCAATTTTGGGTGGTCAGGCTGCACTATTAATC
GCGGTCAGTGCGTTTGGTTTTTTTGCCTTTGAACGACGTGATATTATTCTAGGAGCCTAA

Upstream 100 bases:

>100_bases
ATTTGCACGTTGTATCGGGTAAAGAACCACCAGCTGAAATGCAGCCCCAAGCGCCGCTGGCCATTCTGGATAGTTTGTTA
GCTGGCGAGGAGCAGCAATA

Downstream 100 bases:

>100_bases
GGTGCAAGCTGATGTGTTGGTCATTGGCGCAGGCCTCGCTGGCTTGTGGAGCGCAATCATCCATGCGCAGGCAGGCCGCA
AGGTTAGCCTGTTGGCCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MAKLRQIWAWTRFIWSEYQRTGRFLVELGALIIFAYVFLRKPNVDAHLTATQFFGMTAIFVLCQTIFTTTMMAGLGNRPQ
GYVVLARSLGRKGYLVGLFLVAFLISLVNLILCTIIVTIINKPVLWDAVIWGAGALPLILDIALVTALVLLLSSLVLSQG
WRLSILAVIALASLSTSDIFTNTFDPNGSLGKILAAIRTIVGIPLTPLFAGFELAVTRQAYESNLNQALAILGGQAALLI
AVSAFGFFAFERRDIILGA

Sequences:

>Translated_259_residues
MAKLRQIWAWTRFIWSEYQRTGRFLVELGALIIFAYVFLRKPNVDAHLTATQFFGMTAIFVLCQTIFTTTMMAGLGNRPQ
GYVVLARSLGRKGYLVGLFLVAFLISLVNLILCTIIVTIINKPVLWDAVIWGAGALPLILDIALVTALVLLLSSLVLSQG
WRLSILAVIALASLSTSDIFTNTFDPNGSLGKILAAIRTIVGIPLTPLFAGFELAVTRQAYESNLNQALAILGGQAALLI
AVSAFGFFAFERRDIILGA
>Mature_258_residues
AKLRQIWAWTRFIWSEYQRTGRFLVELGALIIFAYVFLRKPNVDAHLTATQFFGMTAIFVLCQTIFTTTMMAGLGNRPQG
YVVLARSLGRKGYLVGLFLVAFLISLVNLILCTIIVTIINKPVLWDAVIWGAGALPLILDIALVTALVLLLSSLVLSQGW
RLSILAVIALASLSTSDIFTNTFDPNGSLGKILAAIRTIVGIPLTPLFAGFELAVTRQAYESNLNQALAILGGQAALLIA
VSAFGFFAFERRDIILGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28210; Mature: 28079

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLRQIWAWTRFIWSEYQRTGRFLVELGALIIFAYVFLRKPNVDAHLTATQFFGMTAIF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH
VLCQTIFTTTMMAGLGNRPQGYVVLARSLGRKGYLVGLFLVAFLISLVNLILCTIIVTII
HHHHHHHHHHHHHHCCCCCCHHEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKPVLWDAVIWGAGALPLILDIALVTALVLLLSSLVLSQGWRLSILAVIALASLSTSDIF
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHC
TNTFDPNGSLGKILAAIRTIVGIPLTPLFAGFELAVTRQAYESNLNQALAILGGQAALLI
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AVSAFGFFAFERRDIILGA
HHHHHHHHHHHCCCCEECC
>Mature Secondary Structure 
AKLRQIWAWTRFIWSEYQRTGRFLVELGALIIFAYVFLRKPNVDAHLTATQFFGMTAIF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH
VLCQTIFTTTMMAGLGNRPQGYVVLARSLGRKGYLVGLFLVAFLISLVNLILCTIIVTII
HHHHHHHHHHHHHHCCCCCCHHEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKPVLWDAVIWGAGALPLILDIALVTALVLLLSSLVLSQGWRLSILAVIALASLSTSDIF
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHC
TNTFDPNGSLGKILAAIRTIVGIPLTPLFAGFELAVTRQAYESNLNQALAILGGQAALLI
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AVSAFGFFAFERRDIILGA
HHHHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA