Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899885
Identifier: 159899885
GI number: 159899885
Start: 4248118
End: 4248984
Strand: Direct
Name: 159899885
Synonym: Haur_3368
Alternate gene names: NA
Gene position: 4248118-4248984 (Clockwise)
Preceding gene: 159899884
Following gene: 159899886
Centisome position: 66.94
GC content: 53.98
Gene sequence:
>867_bases ATGAACACACTACCATTCTTTCGATTGGCGATGCGTTGGCTGCCGCGACTCCCTAATTGGCTGGTCGATGCAGCCTGTGA TCTTTTAGGGGTCGGCTTGCTGGCTATCCCTCGCTTGCGCCATAACACCCGTTCGAACCTCAAGCGGATTGCTCCAAAAA CCCAAGGCTTGGCTCGTTGGTATTTGCAATCGCGCGTGCTGGCAAACTCCTTGCGCCATTATGCCGATCTGGTGCGGCTT CCAGCTTGGAGTTCCGAGCAACTGCGCCAACGCTTCGAGCATTCGGGTTTAGAACACTTACGCCAATTAACTGAAACTGG CGGCTTAGTCATCGTCGCGCATACTGGCTCGTTTAGCACTGGCCTTTCGGTTTTAGCGGCTCATGGCTTGCCAGTTGTAC TGGTTGTTGAGGCAATCGAGCCACCAGAACATTTGGAACTTGTCAAGGAATTACGCGCAGCCCATGGCGGCGAATTGATT GTGCTGGGGCCAAACGCTGGGCGTGAAGTGCTCAAGGCGTTACGTGCCAAAAAATTAGTGGTGCTAGCAGGTGATCGCGA TCTGGCGGCTCAATCAATTAAGTTGCCGTTTTTTGGTGAGCCAGCCGATGTGCCAATTGGCCCAGCTCGCTTGGCTTTAC GCGGCTGGCCAGTGGTCGTGGGTACTTGTGGCTGGTTTGATGATCATCGCTCATTCTTTCGGGCCGAGCCAATCCAACAT TTTCAGGTTTTAGCCCATGAAACGCCCGATCAAGCAGCAGCACGGGTTGCCAGCGACATGTTGGGCTACCTCGAATACCG AATCGCCACCCATCCTGCAAGTTGGGTTGTACTGCAATCAGTGTGGGCCAATCGCACCGACGATTAA
Upstream 100 bases:
>100_bases GAGGGGCTGGGGGTAAGGGCATGTCATGGATTATCAATCTAATGAACCATTACACCTAAGCCCTATGCTCTATGCTCTTT GTTCTATGCTCTAAACAATT
Downstream 100 bases:
>100_bases AATTCGTGCTACTATTGGGCCAATTGATCCAAATTTGCCGATTTGCTGAACAACTACCAAATAAAGGAAGGCCAAGCACA TGGCCACGATGCCAATGAGT
Product: lipid A biosynthesis acyltransferase
Products: NA
Alternate protein names: PIM acyltransferase [H]
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MNTLPFFRLAMRWLPRLPNWLVDAACDLLGVGLLAIPRLRHNTRSNLKRIAPKTQGLARWYLQSRVLANSLRHYADLVRL PAWSSEQLRQRFEHSGLEHLRQLTETGGLVIVAHTGSFSTGLSVLAAHGLPVVLVVEAIEPPEHLELVKELRAAHGGELI VLGPNAGREVLKALRAKKLVVLAGDRDLAAQSIKLPFFGEPADVPIGPARLALRGWPVVVGTCGWFDDHRSFFRAEPIQH FQVLAHETPDQAAARVASDMLGYLEYRIATHPASWVVLQSVWANRTDD
Sequences:
>Translated_288_residues MNTLPFFRLAMRWLPRLPNWLVDAACDLLGVGLLAIPRLRHNTRSNLKRIAPKTQGLARWYLQSRVLANSLRHYADLVRL PAWSSEQLRQRFEHSGLEHLRQLTETGGLVIVAHTGSFSTGLSVLAAHGLPVVLVVEAIEPPEHLELVKELRAAHGGELI VLGPNAGREVLKALRAKKLVVLAGDRDLAAQSIKLPFFGEPADVPIGPARLALRGWPVVVGTCGWFDDHRSFFRAEPIQH FQVLAHETPDQAAARVASDMLGYLEYRIATHPASWVVLQSVWANRTDD >Mature_288_residues MNTLPFFRLAMRWLPRLPNWLVDAACDLLGVGLLAIPRLRHNTRSNLKRIAPKTQGLARWYLQSRVLANSLRHYADLVRL PAWSSEQLRQRFEHSGLEHLRQLTETGGLVIVAHTGSFSTGLSVLAAHGLPVVLVVEAIEPPEHLELVKELRAAHGGELI VLGPNAGREVLKALRAKKLVVLAGDRDLAAQSIKLPFFGEPADVPIGPARLALRGWPVVVGTCGWFDDHRSFFRAEPIQH FQVLAHETPDQAAARVASDMLGYLEYRIATHPASWVVLQSVWANRTDD
Specific function: Catalyzes the acylation to the position 6 of the alpha- 1,2-linked mannose residue of the phosphatidyl-myo-inositol dimannoside (PIM2) or monomannoside (PIM1) [H]
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the htrB/msbB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004960 [H]
Pfam domain/function: PF03279 Lip_A_acyltrans [H]
EC number: NA
Molecular weight: Translated: 32006; Mature: 32006
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLPFFRLAMRWLPRLPNWLVDAACDLLGVGLLAIPRLRHNTRSNLKRIAPKTQGLARW CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH YLQSRVLANSLRHYADLVRLPAWSSEQLRQRFEHSGLEHLRQLTETGGLVIVAHTGSFST HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHH GLSVLAAHGLPVVLVVEAIEPPEHLELVKELRAAHGGELIVLGPNAGREVLKALRAKKLV HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCEEE VLAGDRDLAAQSIKLPFFGEPADVPIGPARLALRGWPVVVGTCGWFDDHRSFFRAEPIQH EEECCCCHHHHEECCCCCCCCCCCCCCHHHHHEECCCEEEEECCCCHHHHHHHHCCHHHH FQVLAHETPDQAAARVASDMLGYLEYRIATHPASWVVLQSVWANRTDD HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MNTLPFFRLAMRWLPRLPNWLVDAACDLLGVGLLAIPRLRHNTRSNLKRIAPKTQGLARW CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH YLQSRVLANSLRHYADLVRLPAWSSEQLRQRFEHSGLEHLRQLTETGGLVIVAHTGSFST HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHH GLSVLAAHGLPVVLVVEAIEPPEHLELVKELRAAHGGELIVLGPNAGREVLKALRAKKLV HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCEEE VLAGDRDLAAQSIKLPFFGEPADVPIGPARLALRGWPVVVGTCGWFDDHRSFFRAEPIQH EEECCCCHHHHEECCCCCCCCCCCCCCHHHHHEECCCEEEEECCCCHHHHHHHHCCHHHH FQVLAHETPDQAAARVASDMLGYLEYRIATHPASWVVLQSVWANRTDD HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12368430; 12218036 [H]