Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899864
Identifier: 159899864
GI number: 159899864
Start: 4221486
End: 4221710
Strand: Direct
Name: 159899864
Synonym: Haur_3347
Alternate gene names: NA
Gene position: 4221486-4221710 (Clockwise)
Preceding gene: 159899863
Following gene: 159899867
Centisome position: 66.52
GC content: 46.22
Gene sequence:
>225_bases ATGAGCATGGTCATTGAAACTCAAACATATACAATCAAAATTTCGCCTAATACCGATGAGCATAGCATCTCGATTGTGCG CTCGGATGGGATTGAGGCTACCTGTTATCAACTAAACGAGGTTATTACGGTTGTCGAAGTGCTGGGTGGGCGTGGCTGGT GGCAGCAACATCAAACCCAAGTTCGTAGCCTCCTCGAAGCATGTTTTGGGGAAACAGTCTGTTAA
Upstream 100 bases:
>100_bases AATTGTACTCTAAAACCATAGTCCTTCTGGTTGAGAAAACGTTTCCAACCATCAGGGGAGTAAAGGTGAATAGCACTCAC GAAAGGGTAGTAGTAAACAA
Downstream 100 bases:
>100_bases ACCCCAATTAATAGATCAACAGGGCGGATGAAACATCCGCCCTGTTTTTGTTTAATTAGCCTAATTCACCATTGGCATAG CGGGCACGTAGCACTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 73
Protein sequence:
>74_residues MSMVIETQTYTIKISPNTDEHSISIVRSDGIEATCYQLNEVITVVEVLGGRGWWQQHQTQVRSLLEACFGETVC
Sequences:
>Translated_74_residues MSMVIETQTYTIKISPNTDEHSISIVRSDGIEATCYQLNEVITVVEVLGGRGWWQQHQTQVRSLLEACFGETVC >Mature_73_residues SMVIETQTYTIKISPNTDEHSISIVRSDGIEATCYQLNEVITVVEVLGGRGWWQQHQTQVRSLLEACFGETVC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8332; Mature: 8200
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMVIETQTYTIKISPNTDEHSISIVRSDGIEATCYQLNEVITVVEVLGGRGWWQQHQTQ CCEEEECCEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH VRSLLEACFGETVC HHHHHHHHCCCCCC >Mature Secondary Structure SMVIETQTYTIKISPNTDEHSISIVRSDGIEATCYQLNEVITVVEVLGGRGWWQQHQTQ CEEEECCEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH VRSLLEACFGETVC HHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA