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The map label for this gene is pimB [H]

Identifier: 159899817

GI number: 159899817

Start: 4165051

End: 4166178

Strand: Direct

Name: pimB [H]

Synonym: Haur_3300

Alternate gene names: 159899817

Gene position: 4165051-4166178 (Clockwise)

Preceding gene: 159899816

Following gene: 159899818

Centisome position: 65.63

GC content: 49.65

Gene sequence:

>1128_bases
GTGCGTGTGGCTCCCAAAATTGCTTTTATTCGTAAGGGGCGCTGGCCGTTGGCGAATGTGCGAACCGCCGAAGCACTGCG
TGCTCAATTCCCCGAATACGAACTCCGTGAGATCGATTTAATTCCCATCATTCGACGCAAGCCTGCCTTGGTTGCATTAA
ACGGCTGGTGGACATTACGCCAATATGCTGGCGATTTGGCCATGCGGCGACGTGGCCCCAAAGATGCCTTTTTGATCACT
AGTTATATTTTCCGTGCTGTCAAGCATTTAGTGGCCGATTTACTGCGCGATGACGACTATCTGTTTAGTTTTCAGATGCA
ATCATTATTTGATGCTAGCGTGCCAAATATCCCGCATTTTGTCTATACCGACCATACCTTGCTGGCAAATCGTCAATATC
CAGGCTTTAATCCGGCTTCACTCTATCACCCTGAATGGATGAAGTTAGAGCCAACAATTTATCAAAATGCCAATTTAGTC
TTTACACGTTCCAATCATGTTTCACGTTCACTAGTCGAAGATTACCATTGTGATCCAGCCAAAGTACGTTGTGTTTACGC
TGGCAGCAATGCTCCGGTGATCAGCGAACCGCCTGATCCAGCTCGCTATGCCAGCCAAAATATTGTCTATGTTGGGATAG
ATTGGGAGCGTAAAGGCGGCCCTGAATTGCTGCAAGCTTTCGCCCAAGTGCGGGCGGTTTATCCCAATGCCACCTTGACG
ATCATCGGCGCAAACCCTCAAACCAATCAGCCAGGGGTTGAGGTGATTGGGCGGATTCCGGTTGAGCAATTACCGCACTA
TTATCAACGCGCCGCCGTCTTTTGCATGCCCACCAAACTTGAGCCATTTGGCATCGTCACGATTGAAGCCATGAACTATT
GGCTGCCTGTGGTTTCAACCAATCTTGGAGCCATGCCCGATTTTATCGAGCACGATCACAACGGCTATTTGGTCGAACCA
GGCACGGTTGATCAACTAGCCACCGCCTTGATCAAGCTGGTTGGCGATCCTGAACGCTGTCGGCGTTTTGGGGCACGCAG
TGTCGAAATTGCGGCACGGTATCGCTGGGAATCGGTTGGTTCGGCTATGCGTGAGGCAATTATCCAGAACATAGAGCATA
GAACATAA

Upstream 100 bases:

>100_bases
ACCGTGATTAATCCAAATCAATAGCCGCTTTTTCCAATAAAATCCTCAATTCAGACCGACAGTAGCCCCGAGTTACTGTC
GGTCGTGATCTGTGCTGGAG

Downstream 100 bases:

>100_bases
GGGGCTAGGGGTCAGGGGTCAGGGGCTAGGGATCGGGGGCTTGCTTTTAACGCAGAGAATATGAGGTTATGAATTAGCTG
TAATGGCTTATAGCATTAAC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: Alpha-D-mannose-alpha-(1-6)-phosphatidylmyo-inositol-mannosyltransferase; Alpha-mannosyltransferase; Alpha-manT; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MRVAPKIAFIRKGRWPLANVRTAEALRAQFPEYELREIDLIPIIRRKPALVALNGWWTLRQYAGDLAMRRRGPKDAFLIT
SYIFRAVKHLVADLLRDDDYLFSFQMQSLFDASVPNIPHFVYTDHTLLANRQYPGFNPASLYHPEWMKLEPTIYQNANLV
FTRSNHVSRSLVEDYHCDPAKVRCVYAGSNAPVISEPPDPARYASQNIVYVGIDWERKGGPELLQAFAQVRAVYPNATLT
IIGANPQTNQPGVEVIGRIPVEQLPHYYQRAAVFCMPTKLEPFGIVTIEAMNYWLPVVSTNLGAMPDFIEHDHNGYLVEP
GTVDQLATALIKLVGDPERCRRFGARSVEIAARYRWESVGSAMREAIIQNIEHRT

Sequences:

>Translated_375_residues
MRVAPKIAFIRKGRWPLANVRTAEALRAQFPEYELREIDLIPIIRRKPALVALNGWWTLRQYAGDLAMRRRGPKDAFLIT
SYIFRAVKHLVADLLRDDDYLFSFQMQSLFDASVPNIPHFVYTDHTLLANRQYPGFNPASLYHPEWMKLEPTIYQNANLV
FTRSNHVSRSLVEDYHCDPAKVRCVYAGSNAPVISEPPDPARYASQNIVYVGIDWERKGGPELLQAFAQVRAVYPNATLT
IIGANPQTNQPGVEVIGRIPVEQLPHYYQRAAVFCMPTKLEPFGIVTIEAMNYWLPVVSTNLGAMPDFIEHDHNGYLVEP
GTVDQLATALIKLVGDPERCRRFGARSVEIAARYRWESVGSAMREAIIQNIEHRT
>Mature_375_residues
MRVAPKIAFIRKGRWPLANVRTAEALRAQFPEYELREIDLIPIIRRKPALVALNGWWTLRQYAGDLAMRRRGPKDAFLIT
SYIFRAVKHLVADLLRDDDYLFSFQMQSLFDASVPNIPHFVYTDHTLLANRQYPGFNPASLYHPEWMKLEPTIYQNANLV
FTRSNHVSRSLVEDYHCDPAKVRCVYAGSNAPVISEPPDPARYASQNIVYVGIDWERKGGPELLQAFAQVRAVYPNATLT
IIGANPQTNQPGVEVIGRIPVEQLPHYYQRAAVFCMPTKLEPFGIVTIEAMNYWLPVVSTNLGAMPDFIEHDHNGYLVEP
GTVDQLATALIKLVGDPERCRRFGARSVEIAARYRWESVGSAMREAIIQNIEHRT

Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 6 of a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1) to generate phosphatidyl-myo-inositol bearing alpha-1,2- and alpha-1,6-linked mannose resid

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.57 [H]

Molecular weight: Translated: 42691; Mature: 42691

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVAPKIAFIRKGRWPLANVRTAEALRAQFPEYELREIDLIPIIRRKPALVALNGWWTLR
CCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEECCCHHH
QYAGDLAMRRRGPKDAFLITSYIFRAVKHLVADLLRDDDYLFSFQMQSLFDASVPNIPHF
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHCCCCCCCEE
VYTDHTLLANRQYPGFNPASLYHPEWMKLEPTIYQNANLVFTRSNHVSRSLVEDYHCDPA
EEECCEEEECCCCCCCCCCCCCCCCCEEECCEEECCCCEEEEECCCHHHHHHHHHCCCCH
KVRCVYAGSNAPVISEPPDPARYASQNIVYVGIDWERKGGPELLQAFAQVRAVYPNATLT
HEEEEEECCCCCCCCCCCCHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHEECCCCEEE
IIGANPQTNQPGVEVIGRIPVEQLPHYYQRAAVFCMPTKLEPFGIVTIEAMNYWLPVVST
EEECCCCCCCCCHHEEECCCHHHHHHHHHCEEEEEECCCCCCCEEEEEEEHHHHHHHHHC
NLGAMPDFIEHDHNGYLVEPGTVDQLATALIKLVGDPERCRRFGARSVEIAARYRWESVG
CCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHCCCCCEEEHHHHHHHHHH
SAMREAIIQNIEHRT
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MRVAPKIAFIRKGRWPLANVRTAEALRAQFPEYELREIDLIPIIRRKPALVALNGWWTLR
CCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEECCCHHH
QYAGDLAMRRRGPKDAFLITSYIFRAVKHLVADLLRDDDYLFSFQMQSLFDASVPNIPHF
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHCCCCCCCEE
VYTDHTLLANRQYPGFNPASLYHPEWMKLEPTIYQNANLVFTRSNHVSRSLVEDYHCDPA
EEECCEEEECCCCCCCCCCCCCCCCCEEECCEEECCCCEEEEECCCHHHHHHHHHCCCCH
KVRCVYAGSNAPVISEPPDPARYASQNIVYVGIDWERKGGPELLQAFAQVRAVYPNATLT
HEEEEEECCCCCCCCCCCCHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHEECCCCEEE
IIGANPQTNQPGVEVIGRIPVEQLPHYYQRAAVFCMPTKLEPFGIVTIEAMNYWLPVVST
EEECCCCCCCCCHHEEECCCHHHHHHHHHCEEEEEECCCCCCCEEEEEEEHHHHHHHHHC
NLGAMPDFIEHDHNGYLVEPGTVDQLATALIKLVGDPERCRRFGARSVEIAARYRWESVG
CCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHCCCCCEEEHHHHHHHHHH
SAMREAIIQNIEHRT
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]