Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899797
Identifier: 159899797
GI number: 159899797
Start: 4144575
End: 4145876
Strand: Direct
Name: 159899797
Synonym: Haur_3279
Alternate gene names: NA
Gene position: 4144575-4145876 (Clockwise)
Preceding gene: 159899796
Following gene: 159899798
Centisome position: 65.3
GC content: 45.55
Gene sequence:
>1302_bases ATGAAATGGCAATGGGTATGCCGACTAGGCTTGCTATTAAGCCTCGGATTTTTTAGTAACCCCGTAGCTGCGACGCAAAG CCAAACGCTCAGCCGCGAGATTGTCAGCGAGCATACGATTACGCAGCTTAAACTTGATGGCAATTGGCTGGCGTGGCGCA CCTGGCGCACCGATTTCGTCAATTATACGAGTGAATTATGGGTAACCAATCTTACGACTGGAACGAGTGTTAGCCTTGGC AGTATTCAAAATGAAACCTATGACTTCTTTATTGATAATGGTCGGGTAATCTGGCGCGATAAGCACCATGTCTATCAGTA TGATCTGGCGACCCAAACCAATACCATCTTGCAAGTGCCCCATCAGCAAAACCACATGCGTTGGACGGTTGCTGGCGATT GGCTGATTTGGCTGGAACTCGAAGGTTCACCACCGCAACTCACCAATCAAATCTGGAAATGGCATCTGGCTGGCAATCAG GCTCCAGTCTTGGTTGGCAGCGAGGTAGCCACGATTTATGGCATTGATTCGCTGCAATCTGATGGCGAGATTATTAGTTG GGCTTATGCCACCCATGTTGTTGTAAAAAATAGTGTCTGCTCAGAGATCCATTATCTTGCTTTAGATGGATCACAGGCAC CTCAAAAACTAACCGAACCCGCTTGTAATATCGGGATTAAGCAAAATCTATTACTGAATAAGAACTTTTATTATTGTAAC AATCAACATTTATATGCTCGAACACTAGCAAATACTGAAATCTTGATCAACGAAAATAATTGTCGTTTTGATGCGCTGTA TGGTTTTTCTGGAAGCGGAAATTTCTTGGTAGCGCTCAATTATGGTGAACATACTACTTCCCAGATTAGCGTCGTGGGGG TTGATATTCGACAAAAAAGCATGTTTACAATTGACCGCTTTGGCTATAGCGATAGTGGTCGTCCATTGATTCATATTGAT AATTCACTCGTAGCATGGAGCGATAATCGTGGAGCCAAGCCAGTAATTCATGTGCGGCCCATTGCTGAGGTTGTGCCAAC CGCCCCACGCCAAGCCGCCGATCCATTGCTAGAGAATCGCAGCTATTACCCTGAAAGTCAGCACTCGCTTGGTGGATTAT TTGAACAATATTGGCAGAAGAATGGGGCTTGGCAGTGTTTGGCTATCCGCAAAGCGAAGAATTTAGCCAAATCAATGCCG ATACTGGTAAAACTTATACGGTGCAATTGCTTGAGCGTCAGCGCTACGAACATCACCCTGAATTGGCTGGCACACCATAT GAGGTTTCGTTGGGGCGTTTAG
Upstream 100 bases:
>100_bases TCAGATACTCACAACTCCTGTTTCAGTTCGCTAGCAGCCAAAATCAGCTTTCTTTCGACTACACTCGTTTTCAGTAGTTT TGGTGTAGAAAGGACGCACG
Downstream 100 bases:
>100_bases GAGCCGAGCGTTTGACCACACTCAATCGTAATTGGCAAAACGAGGGCGATACTTCGGCTGGAGCCGAGCAATTGCCTGGC CAATGCCAGCATTTTGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MKWQWVCRLGLLLSLGFFSNPVAATQSQTLSREIVSEHTITQLKLDGNWLAWRTWRTDFVNYTSELWVTNLTTGTSVSLG SIQNETYDFFIDNGRVIWRDKHHVYQYDLATQTNTILQVPHQQNHMRWTVAGDWLIWLELEGSPPQLTNQIWKWHLAGNQ APVLVGSEVATIYGIDSLQSDGEIISWAYATHVVVKNSVCSEIHYLALDGSQAPQKLTEPACNIGIKQNLLLNKNFYYCN NQHLYARTLANTEILINENNCRFDALYGFSGSGNFLVALNYGEHTTSQISVVGVDIRQKSMFTIDRFGYSDSGRPLIHID NSLVAWSDNRGAKPVIHVRPIAEVVPTAPRQAADPLLENRSYYPESQHSLGGLFEQYWQKNGAWQCLAIRKAKNLAKSMP ILVKLIRCNCLSVSATNITLNWLAHHMRFRWGV
Sequences:
>Translated_433_residues MKWQWVCRLGLLLSLGFFSNPVAATQSQTLSREIVSEHTITQLKLDGNWLAWRTWRTDFVNYTSELWVTNLTTGTSVSLG SIQNETYDFFIDNGRVIWRDKHHVYQYDLATQTNTILQVPHQQNHMRWTVAGDWLIWLELEGSPPQLTNQIWKWHLAGNQ APVLVGSEVATIYGIDSLQSDGEIISWAYATHVVVKNSVCSEIHYLALDGSQAPQKLTEPACNIGIKQNLLLNKNFYYCN NQHLYARTLANTEILINENNCRFDALYGFSGSGNFLVALNYGEHTTSQISVVGVDIRQKSMFTIDRFGYSDSGRPLIHID NSLVAWSDNRGAKPVIHVRPIAEVVPTAPRQAADPLLENRSYYPESQHSLGGLFEQYWQKNGAWQCLAIRKAKNLAKSMP ILVKLIRCNCLSVSATNITLNWLAHHMRFRWGV >Mature_433_residues MKWQWVCRLGLLLSLGFFSNPVAATQSQTLSREIVSEHTITQLKLDGNWLAWRTWRTDFVNYTSELWVTNLTTGTSVSLG SIQNETYDFFIDNGRVIWRDKHHVYQYDLATQTNTILQVPHQQNHMRWTVAGDWLIWLELEGSPPQLTNQIWKWHLAGNQ APVLVGSEVATIYGIDSLQSDGEIISWAYATHVVVKNSVCSEIHYLALDGSQAPQKLTEPACNIGIKQNLLLNKNFYYCN NQHLYARTLANTEILINENNCRFDALYGFSGSGNFLVALNYGEHTTSQISVVGVDIRQKSMFTIDRFGYSDSGRPLIHID NSLVAWSDNRGAKPVIHVRPIAEVVPTAPRQAADPLLENRSYYPESQHSLGGLFEQYWQKNGAWQCLAIRKAKNLAKSMP ILVKLIRCNCLSVSATNITLNWLAHHMRFRWGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49238; Mature: 49238
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWQWVCRLGLLLSLGFFSNPVAATQSQTLSREIVSEHTITQLKLDGNWLAWRTWRTDFV CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEECHHHH NYTSELWVTNLTTGTSVSLGSIQNETYDFFIDNGRVIWRDKHHVYQYDLATQTNTILQVP CCCCEEEEEEECCCCEEEECCCCCCEEEEEEECCEEEEECCCEEEEEEECCCCCEEEECC HQQNHMRWTVAGDWLIWLELEGSPPQLTNQIWKWHLAGNQAPVLVGSEVATIYGIDSLQS CCCCCEEEEEECCEEEEEEECCCCCHHHHHHEEEEECCCCCCEEECCCEEEEEECCCCCC DGEIISWAYATHVVVKNSVCSEIHYLALDGSQAPQKLTEPACNIGIKQNLLLNKNFYYCN CCCEEEEEEEEEEEEECCHHCCEEEEEECCCCCCHHHCCHHHCCCCCCCEEEECCEEEEC NQHLYARTLANTEILINENNCRFDALYGFSGSGNFLVALNYGEHTTSQISVVGVDIRQKS CCEEEEEEECCEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCCCEEEEEEEEECCCC MFTIDRFGYSDSGRPLIHIDNSLVAWSDNRGAKPVIHVRPIAEVVPTAPRQAADPLLENR EEEEEECCCCCCCCEEEEECCCEEEECCCCCCCCEEEEECHHHHCCCCCCHHHCHHHHCC SYYPESQHSLGGLFEQYWQKNGAWQCLAIRKAKNLAKSMPILVKLIRCNCLSVSATNITL CCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCHHHHHHHHCCEEEEEECEEEH NWLAHHMRFRWGV HHHHHHHEEECCC >Mature Secondary Structure MKWQWVCRLGLLLSLGFFSNPVAATQSQTLSREIVSEHTITQLKLDGNWLAWRTWRTDFV CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEECHHHH NYTSELWVTNLTTGTSVSLGSIQNETYDFFIDNGRVIWRDKHHVYQYDLATQTNTILQVP CCCCEEEEEEECCCCEEEECCCCCCEEEEEEECCEEEEECCCEEEEEEECCCCCEEEECC HQQNHMRWTVAGDWLIWLELEGSPPQLTNQIWKWHLAGNQAPVLVGSEVATIYGIDSLQS CCCCCEEEEEECCEEEEEEECCCCCHHHHHHEEEEECCCCCCEEECCCEEEEEECCCCCC DGEIISWAYATHVVVKNSVCSEIHYLALDGSQAPQKLTEPACNIGIKQNLLLNKNFYYCN CCCEEEEEEEEEEEEECCHHCCEEEEEECCCCCCHHHCCHHHCCCCCCCEEEECCEEEEC NQHLYARTLANTEILINENNCRFDALYGFSGSGNFLVALNYGEHTTSQISVVGVDIRQKS CCEEEEEEECCEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCCCEEEEEEEEECCCC MFTIDRFGYSDSGRPLIHIDNSLVAWSDNRGAKPVIHVRPIAEVVPTAPRQAADPLLENR EEEEEECCCCCCCCEEEEECCCEEEECCCCCCCCEEEEECHHHHCCCCCCHHHCHHHHCC SYYPESQHSLGGLFEQYWQKNGAWQCLAIRKAKNLAKSMPILVKLIRCNCLSVSATNITL CCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCHHHHHHHHCCEEEEEECEEEH NWLAHHMRFRWGV HHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA