Click here to switch to the map view.

The map label for this gene is 159899760

Identifier: 159899760

GI number: 159899760

Start: 4104919

End: 4105851

Strand: Direct

Name: 159899760

Synonym: Haur_3242

Alternate gene names: NA

Gene position: 4104919-4105851 (Clockwise)

Preceding gene: 159899755

Following gene: 159899761

Centisome position: 64.68

GC content: 45.66

Gene sequence:

>933_bases
ATGCAACAGCCATATAAAGCGGTTCAACCTCAGTTTTCAAAGATGCCTAAATATCTATTATTGACCATGCGCCCCAAGCA
GTGGGTCAAAAATATTTTTGTGTTTGCGGGCTTAATTTTTGCCAATGATCTGCTATTGACCAACCCGCAAAGCCTGCTAC
GGGTGCTCGCAACCTTTGGTTTGTGGTGTTTGATCGCTAGCTCAATTTATTTGATCAACGATCTGGTCGATATTGAGAAG
GATCGTGATCATCCTAAAAAGCGTTATCGCCCATTGGCGAGCGGCCATCTTGCCCCAAGTAGCGCGATTGTCGCAACCCT
GATTTTCTTGGTTATCGGCTTGCCCTTGGCCTGGATGCTCAGTCGTGAGGTCGCAATTATCTTGGCTGTGTATGTGGTGA
TGCAATTAGCCTATTCATTTCGACTCAAACATGTGGTAATTCTCGATGTGTTTATTATTGCGGCGGGCTTTGTGTTTCGC
ACAGTTTCGGGCGCGGTAGTGCTTGGCATCGATATTTCACCTTGGTTGTTGATTTGTACTGGTCTGCTATCGCTATTTTT
GGCGCTCGCTAAACGCCGCCATGAGTTGGTGTTGCTCGAAACTGGGGCTGGCAGCCATCGCCGTGTACTCGATGAATATT
CGACCGAGCTATTGCAAGAGATGATTTCGCTGATTACCGCCAGCACCTTGATTGCCTATATTTTGTATACACTCAACCCA
ACCAATCCCCATATACCTACGAGTCCTTTCCCATTAATGTTAATTACCGTGCCATTTGTGATCTATGGCATTTTTCGCTA
TCTCTACTTGGTCTATAAAAAAGATGAAGGCGGCAGCCCTGAGGAGTTATTGCTCAAGGATTTGCCAATGTTGGCCGATA
TTGTGCTTTGGGGCATAACGGTTGTATCGATTAGTTATATCTTTCGCCAATAG

Upstream 100 bases:

>100_bases
CGATCCCCTCTGTTACGTTTGACGCACATGCAATGGGTAGGTAGAATGATCAACGCTAGGCGAAACCGATTCGTCAGGCT
CAAGGAGTAGAGTTATTCGT

Downstream 100 bases:

>100_bases
GAGTTGGTTATGCAAACATCGCGTTCACCGTGGTTGGATCGCCTGTTCCGCCTTGCAAATTTGGCGATTATTCCAGGCTG
GCTGTTGATGATCGGCGCAC

Product: UbiA prenyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MQQPYKAVQPQFSKMPKYLLLTMRPKQWVKNIFVFAGLIFANDLLLTNPQSLLRVLATFGLWCLIASSIYLINDLVDIEK
DRDHPKKRYRPLASGHLAPSSAIVATLIFLVIGLPLAWMLSREVAIILAVYVVMQLAYSFRLKHVVILDVFIIAAGFVFR
TVSGAVVLGIDISPWLLICTGLLSLFLALAKRRHELVLLETGAGSHRRVLDEYSTELLQEMISLITASTLIAYILYTLNP
TNPHIPTSPFPLMLITVPFVIYGIFRYLYLVYKKDEGGSPEELLLKDLPMLADIVLWGITVVSISYIFRQ

Sequences:

>Translated_310_residues
MQQPYKAVQPQFSKMPKYLLLTMRPKQWVKNIFVFAGLIFANDLLLTNPQSLLRVLATFGLWCLIASSIYLINDLVDIEK
DRDHPKKRYRPLASGHLAPSSAIVATLIFLVIGLPLAWMLSREVAIILAVYVVMQLAYSFRLKHVVILDVFIIAAGFVFR
TVSGAVVLGIDISPWLLICTGLLSLFLALAKRRHELVLLETGAGSHRRVLDEYSTELLQEMISLITASTLIAYILYTLNP
TNPHIPTSPFPLMLITVPFVIYGIFRYLYLVYKKDEGGSPEELLLKDLPMLADIVLWGITVVSISYIFRQ
>Mature_310_residues
MQQPYKAVQPQFSKMPKYLLLTMRPKQWVKNIFVFAGLIFANDLLLTNPQSLLRVLATFGLWCLIASSIYLINDLVDIEK
DRDHPKKRYRPLASGHLAPSSAIVATLIFLVIGLPLAWMLSREVAIILAVYVVMQLAYSFRLKHVVILDVFIIAAGFVFR
TVSGAVVLGIDISPWLLICTGLLSLFLALAKRRHELVLLETGAGSHRRVLDEYSTELLQEMISLITASTLIAYILYTLNP
TNPHIPTSPFPLMLITVPFVIYGIFRYLYLVYKKDEGGSPEELLLKDLPMLADIVLWGITVVSISYIFRQ

Specific function: Possible permease/transporter [H]

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: NA

Molecular weight: Translated: 34993; Mature: 34993

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQPYKAVQPQFSKMPKYLLLTMRPKQWVKNIFVFAGLIFANDLLLTNPQSLLRVLATFG
CCCCHHHCCCHHHHCCHHHEEEECHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHH
LWCLIASSIYLINDLVDIEKDRDHPKKRYRPLASGHLAPSSAIVATLIFLVIGLPLAWML
HHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SREVAIILAVYVVMQLAYSFRLKHVVILDVFIIAAGFVFRTVSGAVVLGIDISPWLLICT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHH
GLLSLFLALAKRRHELVLLETGAGSHRRVLDEYSTELLQEMISLITASTLIAYILYTLNP
HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TNPHIPTSPFPLMLITVPFVIYGIFRYLYLVYKKDEGGSPEELLLKDLPMLADIVLWGIT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHH
VVSISYIFRQ
HHHHHHHHCC
>Mature Secondary Structure
MQQPYKAVQPQFSKMPKYLLLTMRPKQWVKNIFVFAGLIFANDLLLTNPQSLLRVLATFG
CCCCHHHCCCHHHHCCHHHEEEECHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHH
LWCLIASSIYLINDLVDIEKDRDHPKKRYRPLASGHLAPSSAIVATLIFLVIGLPLAWML
HHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SREVAIILAVYVVMQLAYSFRLKHVVILDVFIIAAGFVFRTVSGAVVLGIDISPWLLICT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHH
GLLSLFLALAKRRHELVLLETGAGSHRRVLDEYSTELLQEMISLITASTLIAYILYTLNP
HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TNPHIPTSPFPLMLITVPFVIYGIFRYLYLVYKKDEGGSPEELLLKDLPMLADIVLWGIT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHH
VVSISYIFRQ
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]