Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899750
Identifier: 159899750
GI number: 159899750
Start: 4092375
End: 4093595
Strand: Direct
Name: 159899750
Synonym: Haur_3232
Alternate gene names: NA
Gene position: 4092375-4093595 (Clockwise)
Preceding gene: 159899749
Following gene: 159899752
Centisome position: 64.48
GC content: 50.45
Gene sequence:
>1221_bases ATGCGTTATCGTCGAGGGTTGGCGTGTTTATTACTTGGCTTAGTTGGCTGTAGCAGCGCTACCACGCCCACGAGCCAACT CCAACCAACCACCAATGTGATTGCCGTTGAGCCTACTAGTCTACCAGCAGCAACAATTATTCCCACTGTGGCGGCAACGA TGGCCCCAAGCCCTGAAGTGATGAGCGAACTCCTGCCCCAGCCGTTGTATGCGATTTCGTCGCAGCCCAATGGTGTGCAA ATTATGCGCCTAGAAACTGATGGCAACACCCTCACCTCAATCACAAACGAACCTAATGGTGTGTTTGATTATCATGTCAG CACGCTTGGCCAAATTGCCTACATTGCCGATAATGACCTGATTTTGGTTGATGGCTTGGGTCAAAATCGCCAAATTTTGG TAGATGGCCCAACGATTAACCCACAGGCTGATACCAACATTATGCATCGCGATCAATTGAATACGCCACGCTGGTCGCCT GATGGCAGTTCGATCGCCTTTTCATGGGGCGGTTTGCAAATCTACAATTTGATCACTGGCGAACAAACCATGCTGCAACC TCACACCAGTAGCAGCGATTCAGCGCTTGCCGACATTTACGATTACTCGGTATTGTATGGCCCCAACAGTTGGTCGCCCG ATGGGACAACTATTCTAGCTAATGCTGGTTTTGTGCCCGAGGGTGGCAATTTGGTCTTGTTTGATTTAGCCACATCTGAG CCATTAACGATTACGATTGATGGCAATTATCCATGTTGCCATGCTGCTTGGGAGCCAGATGGCAGTGCAATCAATGTCAC CAACGAAGCATTTGGTATGTTTCCAACCGGCTGGTGGCATATCAATCCGAGCACTGGCGAATCGAAGGCCTTGATCGATG GCGATAATGTTGAGCCATTTCAGCCAGTTTCGAGTGTTTTCATGCAGCCCGATGGGAGTCACCTCGCCTTTGTGGGCACA GTCAATAGCAGCGATCCTATGCAGATTTCGGCTCCTTTGACCTTGAGCCAAGTTGGGCTTGATGGCACAATTAGAGCTTT GCGCCAAGATAGCCAAACGGTTGGCAGTGTGTTGTGGTCGCCTGATGGCAGCGGGGCAGTGATTGTGCCTTCGATGATGG CCGAAACTCAACTCCAATGGGTTCCGAGTAATGCTAGCCCAGTGGCTAATTTGGCCTTGAGCGGGGCTAATATGCAGTGG GCAACGACCTTAGATCAGTGA
Upstream 100 bases:
>100_bases ATCTAAAAGCCTTTCAAACCAACAAATGGCTGATTGACAAGCAGCAACAACCTTTGATAGCATCGATTTCTCTGGATTTT GAAGAAATAGGAGTATACCG
Downstream 100 bases:
>100_bases ATTCATAATGCCCTCACCTCTTATTAGGTACATGAAGCAGGGGAACCACAAATCATGAAATCCGAAAACTCCCCTCGCCC GCTGTGGCGGGCGAGGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MRYRRGLACLLLGLVGCSSATTPTSQLQPTTNVIAVEPTSLPAATIIPTVAATMAPSPEVMSELLPQPLYAISSQPNGVQ IMRLETDGNTLTSITNEPNGVFDYHVSTLGQIAYIADNDLILVDGLGQNRQILVDGPTINPQADTNIMHRDQLNTPRWSP DGSSIAFSWGGLQIYNLITGEQTMLQPHTSSSDSALADIYDYSVLYGPNSWSPDGTTILANAGFVPEGGNLVLFDLATSE PLTITIDGNYPCCHAAWEPDGSAINVTNEAFGMFPTGWWHINPSTGESKALIDGDNVEPFQPVSSVFMQPDGSHLAFVGT VNSSDPMQISAPLTLSQVGLDGTIRALRQDSQTVGSVLWSPDGSGAVIVPSMMAETQLQWVPSNASPVANLALSGANMQW ATTLDQ
Sequences:
>Translated_406_residues MRYRRGLACLLLGLVGCSSATTPTSQLQPTTNVIAVEPTSLPAATIIPTVAATMAPSPEVMSELLPQPLYAISSQPNGVQ IMRLETDGNTLTSITNEPNGVFDYHVSTLGQIAYIADNDLILVDGLGQNRQILVDGPTINPQADTNIMHRDQLNTPRWSP DGSSIAFSWGGLQIYNLITGEQTMLQPHTSSSDSALADIYDYSVLYGPNSWSPDGTTILANAGFVPEGGNLVLFDLATSE PLTITIDGNYPCCHAAWEPDGSAINVTNEAFGMFPTGWWHINPSTGESKALIDGDNVEPFQPVSSVFMQPDGSHLAFVGT VNSSDPMQISAPLTLSQVGLDGTIRALRQDSQTVGSVLWSPDGSGAVIVPSMMAETQLQWVPSNASPVANLALSGANMQW ATTLDQ >Mature_406_residues MRYRRGLACLLLGLVGCSSATTPTSQLQPTTNVIAVEPTSLPAATIIPTVAATMAPSPEVMSELLPQPLYAISSQPNGVQ IMRLETDGNTLTSITNEPNGVFDYHVSTLGQIAYIADNDLILVDGLGQNRQILVDGPTINPQADTNIMHRDQLNTPRWSP DGSSIAFSWGGLQIYNLITGEQTMLQPHTSSSDSALADIYDYSVLYGPNSWSPDGTTILANAGFVPEGGNLVLFDLATSE PLTITIDGNYPCCHAAWEPDGSAINVTNEAFGMFPTGWWHINPSTGESKALIDGDNVEPFQPVSSVFMQPDGSHLAFVGT VNSSDPMQISAPLTLSQVGLDGTIRALRQDSQTVGSVLWSPDGSGAVIVPSMMAETQLQWVPSNASPVANLALSGANMQW ATTLDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43118; Mature: 43118
Theoretical pI: Translated: 3.87; Mature: 3.87
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYRRGLACLLLGLVGCSSATTPTSQLQPTTNVIAVEPTSLPAATIIPTVAATMAPSPEV CCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCHHH MSELLPQPLYAISSQPNGVQIMRLETDGNTLTSITNEPNGVFDYHVSTLGQIAYIADNDL HHHHCCCCEEECCCCCCCEEEEEEECCCCEEEEECCCCCCEEEEEHHCCCEEEEEECCCE ILVDGLGQNRQILVDGPTINPQADTNIMHRDQLNTPRWSPDGSSIAFSWGGLQIYNLITG EEEECCCCCCEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCEEEEEEECC EQTMLQPHTSSSDSALADIYDYSVLYGPNSWSPDGTTILANAGFVPEGGNLVLFDLATSE CCEEECCCCCCCCCHHHEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCC PLTITIDGNYPCCHAAWEPDGSAINVTNEAFGMFPTGWWHINPSTGESKALIDGDNVEPF CEEEEECCCCCEEECCCCCCCCEEEEEHHHCCCCCCCEEEECCCCCCCEEEEECCCCCCC QPVSSVFMQPDGSHLAFVGTVNSSDPMQISAPLTLSQVGLDGTIRALRQDSQTVGSVLWS CHHHHHHCCCCCCEEEEEEECCCCCCEEEECCEEEECCCCCHHHHHHHHCCHHHHHEEEC PDGSGAVIVPSMMAETQLQWVPSNASPVANLALSGANMQWATTLDQ CCCCCEEEECCHHCCCEEEEECCCCCCEEEEEEECCCEEEEEECCC >Mature Secondary Structure MRYRRGLACLLLGLVGCSSATTPTSQLQPTTNVIAVEPTSLPAATIIPTVAATMAPSPEV CCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCHHH MSELLPQPLYAISSQPNGVQIMRLETDGNTLTSITNEPNGVFDYHVSTLGQIAYIADNDL HHHHCCCCEEECCCCCCCEEEEEEECCCCEEEEECCCCCCEEEEEHHCCCEEEEEECCCE ILVDGLGQNRQILVDGPTINPQADTNIMHRDQLNTPRWSPDGSSIAFSWGGLQIYNLITG EEEECCCCCCEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCEEEEEEECC EQTMLQPHTSSSDSALADIYDYSVLYGPNSWSPDGTTILANAGFVPEGGNLVLFDLATSE CCEEECCCCCCCCCHHHEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCC PLTITIDGNYPCCHAAWEPDGSAINVTNEAFGMFPTGWWHINPSTGESKALIDGDNVEPF CEEEEECCCCCEEECCCCCCCCEEEEEHHHCCCCCCCEEEECCCCCCCEEEEECCCCCCC QPVSSVFMQPDGSHLAFVGTVNSSDPMQISAPLTLSQVGLDGTIRALRQDSQTVGSVLWS CHHHHHHCCCCCCEEEEEEECCCCCCEEEECCEEEECCCCCHHHHHHHHCCHHHHHEEEC PDGSGAVIVPSMMAETQLQWVPSNASPVANLALSGANMQWATTLDQ CCCCCEEEECCHHCCCEEEEECCCCCCEEEEEEECCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA