Click here to switch to the map view.

The map label for this gene is pdtaS [H]

Identifier: 159899748

GI number: 159899748

Start: 4089256

End: 4091166

Strand: Direct

Name: pdtaS [H]

Synonym: Haur_3230

Alternate gene names: 159899748

Gene position: 4089256-4091166 (Clockwise)

Preceding gene: 159899747

Following gene: 159899749

Centisome position: 64.43

GC content: 52.22

Gene sequence:

>1911_bases
ATGATCGATACAAGCGCTCCGAGCGCAGCTATTCTCGCGATTCTGCAGAATGATAATGCAGTGGCGCAGGCGCAGGAACT
TCGGGCGTTTGGCGCAACCTGGCAAAGCCAAAACGCTGATCCGCAAATGCTGACCAAACTTGGCATCGAAGCCGCTACCC
AAGCTCGGCTTGATCCCAGTGCGGTGGTAACCGATCTCTTGCTTGGCTATGCCGCCGCCCGCGAGGAGCAACGCACTCGC
CATTGGCAAAACCACTTGATGCGCCGCGTGCAGCAGTTGGATGGTTTGCATCGTATTATTAGCGCCGCCAACTCAACCCT
CGATATTGATGCCTCACTCCAAACCGTCGTCGATACAGTCAGCGATGTGATGCGGGTCGATGTTTGCTCGATTTATCTCT
TTGATCAGCATCGGCGCATGTTGCGATTGGTCGCGACTCGTGGGCTGAATCCCAAGGCAATCGGCACGGTTGAGGTGGAA
ATCGGTGTGGGCGTGACTGGTTGGGCTGGCGAATTGGGCAAGCCGGTGGCGATTTTTGATGTGCGCAATGAGCCACGCTA
CCAGCTTGAGCCACTGCTCGAAGAATGGCATTTTCGCTCGCTGTTGGCAGTACCAGTAATTTTATTTGCCAGCGAACGCC
ACCATATCGAAACCCTGCAAGGCGTGATTACGGTGCAAAATCGCGATCCCCATGAATTTTCGCAAGAGCAAACCTCATAT
CTCGAAGTTGTGGCGGGGGAAATTGCGCTCTCAATCGCCAATGCCCAAATGTATCAACAAACTGATGCTCGTTTACACCA
AAAAATTCGTGAATTAACCACCTTGCAGCGCGTAACAGCGGCGCTAGCCTCAACCTTGGATGTTGATACGTTGCTGCATT
TGATTGTGGAGCAAGCTGTCAAGATTGCCGATGTTGATCGGACTGATATTTTCCAAGTACGCCCCAACAACAAGGTGAAA
ATGTTGGCTTCATATGGGCCTGGCCGCACTTCCGGCGTAGAAGATATGATCGTGCAGGTGATTCGTGAGCATCGCGCGAT
CGCGGTGCCAAATGCCTACACCGACGAACGTTGGTCGGGCGTGCAGGCGATTGCCTATCGCGAGGGCTTTCATTCGTTGT
TTGCGCTGCCGATGCGCACGGGCAATCGGATTATCGGGGCATTATGTTTTTATAGCTATGCGCCGCGCCATATTGAATAT
GAGCAGGTGCAATTGCTCACCACCTTTGCCGATGAAGGTGCAATCGCGATTGAAAATGCCCGCTTGTACGAAGAAACCCA
GCGCAATCTGACGATCAAATCAACCTTGCTGCAAGAAATTCATCATCGCGTCCGCAACAACTTACAAACGATCTCAGCGT
TGCTGCAAATGCAGGCACGGCGTTTGAACACCGAAACTGAAGGTCGGCAAGCACTTGATGATAGTGTACGCCGCATCCAT
GCCATTGCCGCAGTGCATAATTTGCTCAGCCACGATGGCGAAGGCCAAACCACGGTGCAAGATATTGCCAAGCAAATTGC
CGAAAATATTCAGATGAGCCTGCCAAGCGAAACGCCAGTTGAGTTTTTGATCACTGGCGATTCAGTTTCGGTCAATGCGC
GGGCGGCTACTGTGCTGGCGATCGTGATCAACGAATTGGTGCATAATGCGCTTGATCATGGCTTGAGTGCCGAAGGCGGC
ATTATTGGCATCGACGGCTGGATGGAAAACGAAGAACAGGCTTGTGTCCAAGTGCGCGACGATGGCCCAATCCGACCGGA
GCCAGTCAAACGTCGTGTAAGCACTGGGCTAGGCCTTGGCATTATCGAAACTCTCGTCAACACCGATCTTGGCGGCAAAT
TTGAGTTCAAACGTGAAACTGAATGGACACGGGCATTAATTACTTTTGCGCCCGATGAGTTGGATGATTAA

Upstream 100 bases:

>100_bases
TAATTTTAGTGGCGATTGGAAGCTATAGCAACTTCTTGCAAAAAGCCGACAATTGCTCTACACTCATTCGGCACGACGAC
TGCAATGAGGCACGCTGGTT

Downstream 100 bases:

>100_bases
GCAAGCATGACCTATCTATCGTTAATTTGTACAGTTAAAAACGAGGCTGATAATATCGCCGATTTGCTAGATTCGATGTT
GGCACAAAGCCGCCAACCTG

Product: signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 636; Mature: 636

Protein sequence:

>636_residues
MIDTSAPSAAILAILQNDNAVAQAQELRAFGATWQSQNADPQMLTKLGIEAATQARLDPSAVVTDLLLGYAAAREEQRTR
HWQNHLMRRVQQLDGLHRIISAANSTLDIDASLQTVVDTVSDVMRVDVCSIYLFDQHRRMLRLVATRGLNPKAIGTVEVE
IGVGVTGWAGELGKPVAIFDVRNEPRYQLEPLLEEWHFRSLLAVPVILFASERHHIETLQGVITVQNRDPHEFSQEQTSY
LEVVAGEIALSIANAQMYQQTDARLHQKIRELTTLQRVTAALASTLDVDTLLHLIVEQAVKIADVDRTDIFQVRPNNKVK
MLASYGPGRTSGVEDMIVQVIREHRAIAVPNAYTDERWSGVQAIAYREGFHSLFALPMRTGNRIIGALCFYSYAPRHIEY
EQVQLLTTFADEGAIAIENARLYEETQRNLTIKSTLLQEIHHRVRNNLQTISALLQMQARRLNTETEGRQALDDSVRRIH
AIAAVHNLLSHDGEGQTTVQDIAKQIAENIQMSLPSETPVEFLITGDSVSVNARAATVLAIVINELVHNALDHGLSAEGG
IIGIDGWMENEEQACVQVRDDGPIRPEPVKRRVSTGLGLGIIETLVNTDLGGKFEFKRETEWTRALITFAPDELDD

Sequences:

>Translated_636_residues
MIDTSAPSAAILAILQNDNAVAQAQELRAFGATWQSQNADPQMLTKLGIEAATQARLDPSAVVTDLLLGYAAAREEQRTR
HWQNHLMRRVQQLDGLHRIISAANSTLDIDASLQTVVDTVSDVMRVDVCSIYLFDQHRRMLRLVATRGLNPKAIGTVEVE
IGVGVTGWAGELGKPVAIFDVRNEPRYQLEPLLEEWHFRSLLAVPVILFASERHHIETLQGVITVQNRDPHEFSQEQTSY
LEVVAGEIALSIANAQMYQQTDARLHQKIRELTTLQRVTAALASTLDVDTLLHLIVEQAVKIADVDRTDIFQVRPNNKVK
MLASYGPGRTSGVEDMIVQVIREHRAIAVPNAYTDERWSGVQAIAYREGFHSLFALPMRTGNRIIGALCFYSYAPRHIEY
EQVQLLTTFADEGAIAIENARLYEETQRNLTIKSTLLQEIHHRVRNNLQTISALLQMQARRLNTETEGRQALDDSVRRIH
AIAAVHNLLSHDGEGQTTVQDIAKQIAENIQMSLPSETPVEFLITGDSVSVNARAATVLAIVINELVHNALDHGLSAEGG
IIGIDGWMENEEQACVQVRDDGPIRPEPVKRRVSTGLGLGIIETLVNTDLGGKFEFKRETEWTRALITFAPDELDD
>Mature_636_residues
MIDTSAPSAAILAILQNDNAVAQAQELRAFGATWQSQNADPQMLTKLGIEAATQARLDPSAVVTDLLLGYAAAREEQRTR
HWQNHLMRRVQQLDGLHRIISAANSTLDIDASLQTVVDTVSDVMRVDVCSIYLFDQHRRMLRLVATRGLNPKAIGTVEVE
IGVGVTGWAGELGKPVAIFDVRNEPRYQLEPLLEEWHFRSLLAVPVILFASERHHIETLQGVITVQNRDPHEFSQEQTSY
LEVVAGEIALSIANAQMYQQTDARLHQKIRELTTLQRVTAALASTLDVDTLLHLIVEQAVKIADVDRTDIFQVRPNNKVK
MLASYGPGRTSGVEDMIVQVIREHRAIAVPNAYTDERWSGVQAIAYREGFHSLFALPMRTGNRIIGALCFYSYAPRHIEY
EQVQLLTTFADEGAIAIENARLYEETQRNLTIKSTLLQEIHHRVRNNLQTISALLQMQARRLNTETEGRQALDDSVRRIH
AIAAVHNLLSHDGEGQTTVQDIAKQIAENIQMSLPSETPVEFLITGDSVSVNARAATVLAIVINELVHNALDHGLSAEGG
IIGIDGWMENEEQACVQVRDDGPIRPEPVKRRVSTGLGLGIIETLVNTDLGGKFEFKRETEWTRALITFAPDELDD

Specific function: Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789193, Length=178, Percent_Identity=30.3370786516854, Blast_Score=90, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR022066
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF12282 H_kinase_N; PF02518 HATPase_c; PF07568 HisKA_2 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 70789; Mature: 70789

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDTSAPSAAILAILQNDNAVAQAQELRAFGATWQSQNADPQMLTKLGIEAATQARLDPS
CCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHH
AVVTDLLLGYAAAREEQRTRHWQNHLMRRVQQLDGLHRIISAANSTLDIDASLQTVVDTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHH
SDVMRVDVCSIYLFDQHRRMLRLVATRGLNPKAIGTVEVEIGVGVTGWAGELGKPVAIFD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEECCCCCCCCCEEEEE
VRNEPRYQLEPLLEEWHFRSLLAVPVILFASERHHIETLQGVITVQNRDPHEFSQEQTSY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEEECCCCCHHHHHHHHHH
LEVVAGEIALSIANAQMYQQTDARLHQKIRELTTLQRVTAALASTLDVDTLLHLIVEQAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
KIADVDRTDIFQVRPNNKVKMLASYGPGRTSGVEDMIVQVIREHRAIAVPNAYTDERWSG
HHHCCCCCCEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCHHCC
VQAIAYREGFHSLFALPMRTGNRIIGALCFYSYAPRHIEYEQVQLLTTFADEGAIAIENA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEECH
RLYEETQRNLTIKSTLLQEIHHRVRNNLQTISALLQMQARRLNTETEGRQALDDSVRRIH
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AIAAVHNLLSHDGEGQTTVQDIAKQIAENIQMSLPSETPVEFLITGDSVSVNARAATVLA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCEEECHHHHHHHH
IVINELVHNALDHGLSAEGGIIGIDGWMENEEQACVQVRDDGPIRPEPVKRRVSTGLGLG
HHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHEEEECCCCCCCCHHHHHHHHCCCCHH
IIETLVNTDLGGKFEFKRETEWTRALITFAPDELDD
HHHHHHCCCCCCEEEECCCCHHHHHHEEECCCCCCC
>Mature Secondary Structure
MIDTSAPSAAILAILQNDNAVAQAQELRAFGATWQSQNADPQMLTKLGIEAATQARLDPS
CCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHH
AVVTDLLLGYAAAREEQRTRHWQNHLMRRVQQLDGLHRIISAANSTLDIDASLQTVVDTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHH
SDVMRVDVCSIYLFDQHRRMLRLVATRGLNPKAIGTVEVEIGVGVTGWAGELGKPVAIFD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEECCCCCCCCCEEEEE
VRNEPRYQLEPLLEEWHFRSLLAVPVILFASERHHIETLQGVITVQNRDPHEFSQEQTSY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEEECCCCCHHHHHHHHHH
LEVVAGEIALSIANAQMYQQTDARLHQKIRELTTLQRVTAALASTLDVDTLLHLIVEQAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
KIADVDRTDIFQVRPNNKVKMLASYGPGRTSGVEDMIVQVIREHRAIAVPNAYTDERWSG
HHHCCCCCCEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCHHCC
VQAIAYREGFHSLFALPMRTGNRIIGALCFYSYAPRHIEYEQVQLLTTFADEGAIAIENA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEECH
RLYEETQRNLTIKSTLLQEIHHRVRNNLQTISALLQMQARRLNTETEGRQALDDSVRRIH
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AIAAVHNLLSHDGEGQTTVQDIAKQIAENIQMSLPSETPVEFLITGDSVSVNARAATVLA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCEEECHHHHHHHH
IVINELVHNALDHGLSAEGGIIGIDGWMENEEQACVQVRDDGPIRPEPVKRRVSTGLGLG
HHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHEEEECCCCCCCCHHHHHHHHCCCCHH
IIETLVNTDLGGKFEFKRETEWTRALITFAPDELDD
HHHHHHCCCCCCEEEECCCCHHHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]