Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899638
Identifier: 159899638
GI number: 159899638
Start: 3937186
End: 3937749
Strand: Direct
Name: 159899638
Synonym: Haur_3119
Alternate gene names: NA
Gene position: 3937186-3937749 (Clockwise)
Preceding gene: 159899637
Following gene: 159899640
Centisome position: 62.04
GC content: 50.71
Gene sequence:
>564_bases GTGAGCGATTCAACCAATCAACAAGCCGTGTTGGAAAGCCAAGTTCGGTCTTTGGTGGAGCTTTCGGAAGATGATTTGTT TCGCAAACTTGGGATTCAGGTCAAACAAGCTGAAGAAGCCGATGCTGCCGCGCTCGAAGTAGCCCAAGCTGAAGGCGCAT TTGCCGAGCCAGTTGGGGTTGAAATGGGCTTGGGCGAAAATCTGCGGGCTTTTGGGGCACGCTGGTGGGCCGAAATCGAG CCAAAACTTTACAATTTGCTGTGTGCCAGCGAAAGCAAAGAGCGCAGCCAAATTTTGGCTCAATTGCCCGAATCGAAGGG CGGCACAGCAGCGGCAGTGGTTGGTGGCGATAGTGGTAATGCTGCGGCTGATAATATTGCCACAGCCCTAGCACCATTAT TGATTGGCCTGTTGCCCTTCAATTTGCCAATTATTGCCTCAGTTGGCGCAACAATTGCCGCCAAAATGATTTTGAGTTCA GGCCTCAAAACGACCTGCGAAATGTGGCAAGAATCAATTGAGGCTCGTGAAGAAGCCAAGGCTAAAGAAAACCCCGCTGA ATAA
Upstream 100 bases:
>100_bases TATGGCGATGCCGATGCCCATGTTTAGGAGTGTGACGTTGGGGCTGTGCGATAACCTTTATCAGCAGCCAAGCATCATTG AGTTATTTTAAGGAGTTGCT
Downstream 100 bases:
>100_bases TTGGTTCCCTCACCCCCTAGCCCCCTCTCCCGCCCCGCAGGCGAGGGGCAACCACCAAACCAAACGCCCTTCTCCCACCG CAGTGGGAGAGGGGTTGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MSDSTNQQAVLESQVRSLVELSEDDLFRKLGIQVKQAEEADAAALEVAQAEGAFAEPVGVEMGLGENLRAFGARWWAEIE PKLYNLLCASESKERSQILAQLPESKGGTAAAVVGGDSGNAAADNIATALAPLLIGLLPFNLPIIASVGATIAAKMILSS GLKTTCEMWQESIEAREEAKAKENPAE
Sequences:
>Translated_187_residues MSDSTNQQAVLESQVRSLVELSEDDLFRKLGIQVKQAEEADAAALEVAQAEGAFAEPVGVEMGLGENLRAFGARWWAEIE PKLYNLLCASESKERSQILAQLPESKGGTAAAVVGGDSGNAAADNIATALAPLLIGLLPFNLPIIASVGATIAAKMILSS GLKTTCEMWQESIEAREEAKAKENPAE >Mature_186_residues SDSTNQQAVLESQVRSLVELSEDDLFRKLGIQVKQAEEADAAALEVAQAEGAFAEPVGVEMGLGENLRAFGARWWAEIEP KLYNLLCASESKERSQILAQLPESKGGTAAAVVGGDSGNAAADNIATALAPLLIGLLPFNLPIIASVGATIAAKMILSSG LKTTCEMWQESIEAREEAKAKENPAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19711; Mature: 19580
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSTNQQAVLESQVRSLVELSEDDLFRKLGIQVKQAEEADAAALEVAQAEGAFAEPVGV CCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC EMGLGENLRAFGARWWAEIEPKLYNLLCASESKERSQILAQLPESKGGTAAAVVGGDSGN CCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCC AAADNIATALAPLLIGLLPFNLPIIASVGATIAAKMILSSGLKTTCEMWQESIEAREEAK CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AKENPAE HCCCCCC >Mature Secondary Structure SDSTNQQAVLESQVRSLVELSEDDLFRKLGIQVKQAEEADAAALEVAQAEGAFAEPVGV CCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC EMGLGENLRAFGARWWAEIEPKLYNLLCASESKERSQILAQLPESKGGTAAAVVGGDSGN CCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCC AAADNIATALAPLLIGLLPFNLPIIASVGATIAAKMILSSGLKTTCEMWQESIEAREEAK CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AKENPAE HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA