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The map label for this gene is ctpA [H]

Identifier: 159899630

GI number: 159899630

Start: 3924733

End: 3926151

Strand: Direct

Name: ctpA [H]

Synonym: Haur_3111

Alternate gene names: 159899630

Gene position: 3924733-3926151 (Clockwise)

Preceding gene: 159899629

Following gene: 159899635

Centisome position: 61.84

GC content: 48.84

Gene sequence:

>1419_bases
ATGAGCGAATTCCAGCCCACCTCGGGCGGTAGCTCAACATCATCAGCAAAGCTATGGGTGGTGTTGAGTGGGATTGTTGG
AGTCTTGTTGGTGGTCGCGATTGCCCTTGGGGCTGGCTATTATTGGGGTAGCTCATCGAAAGAGCAGACGATGACGGCGG
CGAATCAAGCTTTAGCCACCGAAACCGCCCAAATTATGCAAGCAACCCAACAGGCGCTGCCCCCAGCCAATGCCGATGAA
AACTTTCAAACCTTTTGGGAAGTTTGGAATCTGGTCAACAAAGAGTTTTATCACACCGAGCCAATCGACGAAAAACAAAT
GATGTATGGCGCAATTCGCGGCATGCTCCAATCGCTTGGCGATGATTTTACTGGGTTCCAAGAACCCGAAGCCGCCGAAC
GCTCGCGCGAGGATATGCGCGGCAATTTCGAGGGCATCGGAGCCTATGTCGAGTATAAAGATGGCCAGATCCTAATTGTT
TCGCCAATTGAGGGTTCGCCTGCTGAAAAAGCCAATGTGCGAGCTGGCGATATTGTGGTCGCGGTCGATGGCAAGCAAAT
TAGTGAAGTCATCGAGAATCTTGAACGCGATCAAGCGCTTGCAGAAGCCATTAAGCTGATTCGTGGCCCCAAAGGTTCGC
AAGTCGTGATTACGGTCTATCGTACCAGCGAAGAAAAGCAAATCGATATTACGATTATACGCGATACGATTCCGTTGATC
AGCGTGCGCTCAAGCATGATTGGCGATATTGGCTACATTCAATTGAGCGAATTCAAGCAAACATCCTACGATGAATTAGA
CCAAGCAATTGCCAAACTCAAAACCAATAACCCTAAGGCAATTATTTTTGATTTGCGTAACAATCCAGGCGGTTATGTCA
ATCAAGCTCAAAATGTACTTGGACGCTTTACCAAAGATGGGGTAACCCACTATCAAGAAAATAGCGATGGTACGCAAAAG
GAATATCGAACTTTGCAGCAAGGCGATGCCCAAGAATTATTTGATCTCCCAGTTGTGGTCTTGGTAAATGGTGGCTCAGC
CAGCGCCTCGGAAATCGTCTCTGGTGCGATGCAAGATACCAAACGCGCAACCCTGATTGGGGAAAAGACCTTTGGCAAGG
GTTCGGTCCAAAGTGTGCATACCCTGTCGGATAAATCGGAAGCGCGGATTACGATTGCCCATTGGCTTACTCCCAACAAA
CGGGCAATTCATACGCTGGGGATTACCCCCGATTATGTTGTGCCGTTCTCGGATGATGCAACCCAATATCCAATTGAATG
TATTTTGAATCGCACACCTGCCGATGGGGCAACCAGTTGTGCTGATTCACAATTGTTCTGGGCGCTAAAGTTCTTGAACG
AACAACAAACCCCACCGCCACCGCCAACCCCAACGATTACACCAACCCCTGGCAAATAG

Upstream 100 bases:

>100_bases
GATTGCTAATGCCAACCTAACCTACAACTCGGTGCTTAAGTTGTACACTGCTATACAGGCTGGATTAGCCTAGGTTAAAT
TGCATGAAACGAGGTTTTCT

Downstream 100 bases:

>100_bases
CCATAAAAACGCCCGCTCAAGTAAGTTTGAGCGGGCGTTTGTTGTTTTAGCGTTGTTGGCTGGCGTATAAGTCGCGTGGT
ACCATTTGGAAGCTGCTCCA

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MSEFQPTSGGSSTSSAKLWVVLSGIVGVLLVVAIALGAGYYWGSSSKEQTMTAANQALATETAQIMQATQQALPPANADE
NFQTFWEVWNLVNKEFYHTEPIDEKQMMYGAIRGMLQSLGDDFTGFQEPEAAERSREDMRGNFEGIGAYVEYKDGQILIV
SPIEGSPAEKANVRAGDIVVAVDGKQISEVIENLERDQALAEAIKLIRGPKGSQVVITVYRTSEEKQIDITIIRDTIPLI
SVRSSMIGDIGYIQLSEFKQTSYDELDQAIAKLKTNNPKAIIFDLRNNPGGYVNQAQNVLGRFTKDGVTHYQENSDGTQK
EYRTLQQGDAQELFDLPVVVLVNGGSASASEIVSGAMQDTKRATLIGEKTFGKGSVQSVHTLSDKSEARITIAHWLTPNK
RAIHTLGITPDYVVPFSDDATQYPIECILNRTPADGATSCADSQLFWALKFLNEQQTPPPPPTPTITPTPGK

Sequences:

>Translated_472_residues
MSEFQPTSGGSSTSSAKLWVVLSGIVGVLLVVAIALGAGYYWGSSSKEQTMTAANQALATETAQIMQATQQALPPANADE
NFQTFWEVWNLVNKEFYHTEPIDEKQMMYGAIRGMLQSLGDDFTGFQEPEAAERSREDMRGNFEGIGAYVEYKDGQILIV
SPIEGSPAEKANVRAGDIVVAVDGKQISEVIENLERDQALAEAIKLIRGPKGSQVVITVYRTSEEKQIDITIIRDTIPLI
SVRSSMIGDIGYIQLSEFKQTSYDELDQAIAKLKTNNPKAIIFDLRNNPGGYVNQAQNVLGRFTKDGVTHYQENSDGTQK
EYRTLQQGDAQELFDLPVVVLVNGGSASASEIVSGAMQDTKRATLIGEKTFGKGSVQSVHTLSDKSEARITIAHWLTPNK
RAIHTLGITPDYVVPFSDDATQYPIECILNRTPADGATSCADSQLFWALKFLNEQQTPPPPPTPTITPTPGK
>Mature_471_residues
SEFQPTSGGSSTSSAKLWVVLSGIVGVLLVVAIALGAGYYWGSSSKEQTMTAANQALATETAQIMQATQQALPPANADEN
FQTFWEVWNLVNKEFYHTEPIDEKQMMYGAIRGMLQSLGDDFTGFQEPEAAERSREDMRGNFEGIGAYVEYKDGQILIVS
PIEGSPAEKANVRAGDIVVAVDGKQISEVIENLERDQALAEAIKLIRGPKGSQVVITVYRTSEEKQIDITIIRDTIPLIS
VRSSMIGDIGYIQLSEFKQTSYDELDQAIAKLKTNNPKAIIFDLRNNPGGYVNQAQNVLGRFTKDGVTHYQENSDGTQKE
YRTLQQGDAQELFDLPVVVLVNGGSASASEIVSGAMQDTKRATLIGEKTFGKGSVQSVHTLSDKSEARITIAHWLTPNKR
AIHTLGITPDYVVPFSDDATQYPIECILNRTPADGATSCADSQLFWALKFLNEQQTPPPPPTPTITPTPGK

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=325, Percent_Identity=30.4615384615385, Blast_Score=126, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 51517; Mature: 51386

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEFQPTSGGSSTSSAKLWVVLSGIVGVLLVVAIALGAGYYWGSSSKEQTMTAANQALAT
CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
ETAQIMQATQQALPPANADENFQTFWEVWNLVNKEFYHTEPIDEKQMMYGAIRGMLQSLG
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
DDFTGFQEPEAAERSREDMRGNFEGIGAYVEYKDGQILIVSPIEGSPAEKANVRAGDIVV
CCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCEEE
AVDGKQISEVIENLERDQALAEAIKLIRGPKGSQVVITVYRTSEEKQIDITIIRDTIPLI
EECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEECCCCHH
SVRSSMIGDIGYIQLSEFKQTSYDELDQAIAKLKTNNPKAIIFDLRNNPGGYVNQAQNVL
HHHHHHHCCCCEEEEHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHH
GRFTKDGVTHYQENSDGTQKEYRTLQQGDAQELFDLPVVVLVNGGSASASEIVSGAMQDT
HHHHHHCCHHCCCCCCCCHHHHHHHHCCCHHHHHCCCEEEEECCCCCCHHHHHHHHHHHH
KRATLIGEKTFGKGSVQSVHTLSDKSEARITIAHWLTPNKRAIHTLGITPDYVVPFSDDA
HHHEEEECCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCEEEEECCCCCEEEECCCCC
TQYPIECILNRTPADGATSCADSQLFWALKFLNEQQTPPPPPTPTITPTPGK
CCCCHHHEEECCCCCCCCHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SEFQPTSGGSSTSSAKLWVVLSGIVGVLLVVAIALGAGYYWGSSSKEQTMTAANQALAT
CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
ETAQIMQATQQALPPANADENFQTFWEVWNLVNKEFYHTEPIDEKQMMYGAIRGMLQSLG
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
DDFTGFQEPEAAERSREDMRGNFEGIGAYVEYKDGQILIVSPIEGSPAEKANVRAGDIVV
CCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCEEE
AVDGKQISEVIENLERDQALAEAIKLIRGPKGSQVVITVYRTSEEKQIDITIIRDTIPLI
EECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEECCCCHH
SVRSSMIGDIGYIQLSEFKQTSYDELDQAIAKLKTNNPKAIIFDLRNNPGGYVNQAQNVL
HHHHHHHCCCCEEEEHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHH
GRFTKDGVTHYQENSDGTQKEYRTLQQGDAQELFDLPVVVLVNGGSASASEIVSGAMQDT
HHHHHHCCHHCCCCCCCCHHHHHHHHCCCHHHHHCCCEEEEECCCCCCHHHHHHHHHHHH
KRATLIGEKTFGKGSVQSVHTLSDKSEARITIAHWLTPNKRAIHTLGITPDYVVPFSDDA
HHHEEEECCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCEEEEECCCCCEEEECCCCC
TQYPIECILNRTPADGATSCADSQLFWALKFLNEQQTPPPPPTPTITPTPGK
CCCCHHHEEECCCCCCCCHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]