Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899586
Identifier: 159899586
GI number: 159899586
Start: 3872430
End: 3873026
Strand: Direct
Name: 159899586
Synonym: Haur_3067
Alternate gene names: NA
Gene position: 3872430-3873026 (Clockwise)
Preceding gene: 159899585
Following gene: 159899587
Centisome position: 61.02
GC content: 51.09
Gene sequence:
>597_bases GTGATTGAATATCTACTACAGGCGTTGGGCTTGGGGCTGGCGGCTGGCCTCTTGCCTGGGCCAATGTTGGGCTTGGTGAT TCGCGAAACCTTGGAGCATGGTCGCCGCGCTGGTTATTTGGTAGCCTGCGCCCCGTTATTGACCGATGCGCCAATTATCT TGATCGCGCTGTTTGTAGCCAATGCCTTACCAGCCAGCATTAATCGTTGGTTGGGCTTGGCTGGTGGGCTATTTTTGATT TGGATGGGTATCGACGCATGGCGAGCCAAGCCACCAACTGAGGCGAGTGGCGCACCATGGGCTAGTTTATGGCGGGCATT AATCACCAACTGGCTTAACCCACATCCATGGTTATTTTGGCTGCCAGTTGGCGGGCCATTGTTGATTAGCATTCAACGTC AGCATAGTTGGTTGGCGACTGTCAGTTTTTTGCTGGTGTTTTATCTTTTGTTGATTGGCAGCAAAATTTTCCTATGCGAA ATCGTTGCTCGTTCGCGGCGTTTTTTGCAAGGCGCGGCCTATCGTTGGGTTATGCGCGGCTGTAGTGTTTTATTGATTGG CTTGGGCCTAGTACTTATAGCTGAATATCTAGGCTGA
Upstream 100 bases:
>100_bases CATTGTCGCGACTATTCGCCATTATCATGACGATGCGCCAACTGGTTTGGCCGCCCGTTTGCGTTGGGCCGACGATCAGC ATTAATTCAAGGAATCGGCT
Downstream 100 bases:
>100_bases TCGGCAATTGAGCAGGTTAGGCATTATCCCCCATTCAGGTGGCAATAAAGCTTGACCTTGGTACACTCTTTGCTTGAGAG CATAATGCTATAATCGAACG
Product: lysine exporter protein LysE/YggA
Products: NA
Alternate protein names: Lysine Exporter Protein LysE/YggA; LysE Type Translocator; Amino Acid Transporter LysE; Lysine Exporter LysE/YggA; Transporter LysE Family; Component Of A Threonine Efflux System
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MIEYLLQALGLGLAAGLLPGPMLGLVIRETLEHGRRAGYLVACAPLLTDAPIILIALFVANALPASINRWLGLAGGLFLI WMGIDAWRAKPPTEASGAPWASLWRALITNWLNPHPWLFWLPVGGPLLISIQRQHSWLATVSFLLVFYLLLIGSKIFLCE IVARSRRFLQGAAYRWVMRGCSVLLIGLGLVLIAEYLG
Sequences:
>Translated_198_residues MIEYLLQALGLGLAAGLLPGPMLGLVIRETLEHGRRAGYLVACAPLLTDAPIILIALFVANALPASINRWLGLAGGLFLI WMGIDAWRAKPPTEASGAPWASLWRALITNWLNPHPWLFWLPVGGPLLISIQRQHSWLATVSFLLVFYLLLIGSKIFLCE IVARSRRFLQGAAYRWVMRGCSVLLIGLGLVLIAEYLG >Mature_198_residues MIEYLLQALGLGLAAGLLPGPMLGLVIRETLEHGRRAGYLVACAPLLTDAPIILIALFVANALPASINRWLGLAGGLFLI WMGIDAWRAKPPTEASGAPWASLWRALITNWLNPHPWLFWLPVGGPLLISIQRQHSWLATVSFLLVFYLLLIGSKIFLCE IVARSRRFLQGAAYRWVMRGCSVLLIGLGLVLIAEYLG
Specific function: Unknown
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21748; Mature: 21748
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEYLLQALGLGLAAGLLPGPMLGLVIRETLEHGRRAGYLVACAPLLTDAPIILIALFVA CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHEEHHHHHCCCHHHHHHHHHH NALPASINRWLGLAGGLFLIWMGIDAWRAKPPTEASGAPWASLWRALITNWLNPHPWLFW HCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEE LPVGGPLLISIQRQHSWLATVSFLLVFYLLLIGSKIFLCEIVARSRRFLQGAAYRWVMRG EECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH CSVLLIGLGLVLIAEYLG HHHHHHHHHHHHHHHHHC >Mature Secondary Structure MIEYLLQALGLGLAAGLLPGPMLGLVIRETLEHGRRAGYLVACAPLLTDAPIILIALFVA CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHEEHHHHHCCCHHHHHHHHHH NALPASINRWLGLAGGLFLIWMGIDAWRAKPPTEASGAPWASLWRALITNWLNPHPWLFW HCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEE LPVGGPLLISIQRQHSWLATVSFLLVFYLLLIGSKIFLCEIVARSRRFLQGAAYRWVMRG EECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH CSVLLIGLGLVLIAEYLG HHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA