Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is pgl [H]
Identifier: 159899542
GI number: 159899542
Start: 3818910
End: 3819632
Strand: Direct
Name: pgl [H]
Synonym: Haur_3023
Alternate gene names: 159899542
Gene position: 3818910-3819632 (Clockwise)
Preceding gene: 159899541
Following gene: 159899543
Centisome position: 60.17
GC content: 53.11
Gene sequence:
>723_bases ATGACGCTTCAGATTGCCCCAAGCCGCGAGGAATTGATGATCCTCGCGGCTGATCGGCTAGTAGCCGAGGCTCAAACCGC CATCGCTCAACGTGGCCGCTGGACAATCGCGCTTTCGGGTGGCTCAACGCCCAAAGCGTTGTTTGAGTTATTAGCCAGCC CACGCTACATTAATCAGATTCTTTGGGGGCGCTGTTTTTTATTTTGGGGCGATGAGCGCTGCGTCGGGCCTGACGATCTT CAAAGCAACTATCGCATGACCAAAATCGCCTTGATCGATCATATTCCAATTCCCGTGGGTAATGTGTTGCGGATTCGCGG TGAGTTAGCGCCAGAAAGTGCCGCCAGCCTGTATGCTCATGAAATTAAACGCATTTTTGGGCTAGCTGAAGGCCAATTTC CTCAATTCGACACCATGCTGCTGGGCTTGGGCAACGATGGGCATACCGCCTCGCTCTTTCCAGCCAGCGATATTTTGGGT CGCAACGATGTGTTGGTGGCCGAAACATGGGTCGCCAAACTCAAACAATATCGCATCTCGCTGACTGCGCCTGTGATCAA CAACGCCCACAGCAAAATCTTTTTAGCGGCAGGCGACGATAAAGCTGGCGTTATTCGTGAGCTAATCGAGCAGACTGGGG CGTATCAAAGCTACCCCGCCAGTTTGATCAACAACGCCGACTGGCTGATTGACCAAGCGGCGGCCAGCCAACTGCAACAT TAA
Upstream 100 bases:
>100_bases TGAATGAACTAAATATGTATAGTCATGATCGAGTTTATGAACGGGCTTTAGCGATTGTCGCCGCAATTGCTCAAGCAACC GATCCCCATGGAGCACATGT
Downstream 100 bases:
>100_bases CGGATCGTTAACAGATTTTCGTGGCACAATACTAGGCATGCACCATAGCATCGAAAGGAATGTTCATGACTGACCATCGA CCAACCATTATGCTTGTGCA
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MTLQIAPSREELMILAADRLVAEAQTAIAQRGRWTIALSGGSTPKALFELLASPRYINQILWGRCFLFWGDERCVGPDDL QSNYRMTKIALIDHIPIPVGNVLRIRGELAPESAASLYAHEIKRIFGLAEGQFPQFDTMLLGLGNDGHTASLFPASDILG RNDVLVAETWVAKLKQYRISLTAPVINNAHSKIFLAAGDDKAGVIRELIEQTGAYQSYPASLINNADWLIDQAAASQLQH
Sequences:
>Translated_240_residues MTLQIAPSREELMILAADRLVAEAQTAIAQRGRWTIALSGGSTPKALFELLASPRYINQILWGRCFLFWGDERCVGPDDL QSNYRMTKIALIDHIPIPVGNVLRIRGELAPESAASLYAHEIKRIFGLAEGQFPQFDTMLLGLGNDGHTASLFPASDILG RNDVLVAETWVAKLKQYRISLTAPVINNAHSKIFLAAGDDKAGVIRELIEQTGAYQSYPASLINNADWLIDQAAASQLQH >Mature_239_residues TLQIAPSREELMILAADRLVAEAQTAIAQRGRWTIALSGGSTPKALFELLASPRYINQILWGRCFLFWGDERCVGPDDLQ SNYRMTKIALIDHIPIPVGNVLRIRGELAPESAASLYAHEIKRIFGLAEGQFPQFDTMLLGLGNDGHTASLFPASDILGR NDVLVAETWVAKLKQYRISLTAPVINNAHSKIFLAAGDDKAGVIRELIEQTGAYQSYPASLINNADWLIDQAAASQLQH
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI6912586, Length=215, Percent_Identity=35.8139534883721, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI52145310, Length=210, Percent_Identity=35.7142857142857, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI115533058, Length=239, Percent_Identity=28.0334728033473, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI115533060, Length=239, Percent_Identity=28.0334728033473, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6321957, Length=255, Percent_Identity=28.6274509803922, Blast_Score=86, Evalue=7e-18, Organism=Saccharomyces cerevisiae, GI6319918, Length=223, Percent_Identity=30.9417040358744, Blast_Score=82, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6324362, Length=218, Percent_Identity=32.1100917431193, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6321687, Length=230, Percent_Identity=30, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI24641119, Length=227, Percent_Identity=28.1938325991189, Blast_Score=80, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 - InterPro: IPR006148 [H]
Pfam domain/function: PF01182 Glucosamine_iso [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 26367; Mature: 26235
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLQIAPSREELMILAADRLVAEAQTAIAQRGRWTIALSGGSTPKALFELLASPRYINQI CEEEECCCCCCEEEEEHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCHHHHHH LWGRCFLFWGDERCVGPDDLQSNYRMTKIALIDHIPIPVGNVLRIRGELAPESAASLYAH HHHEEEEEECCCCCCCCHHHHCCCEEEEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHH EIKRIFGLAEGQFPQFDTMLLGLGNDGHTASLFPASDILGRNDVLVAETWVAKLKQYRIS HHHHHHHCCCCCCCCCCEEEEECCCCCCEEEECCHHHHCCCCCEEEHHHHHHHHHHHHEE LTAPVINNAHSKIFLAAGDDKAGVIRELIEQTGAYQSYPASLINNADWLIDQAAASQLQH EECCHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure TLQIAPSREELMILAADRLVAEAQTAIAQRGRWTIALSGGSTPKALFELLASPRYINQI EEEECCCCCCEEEEEHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCHHHHHH LWGRCFLFWGDERCVGPDDLQSNYRMTKIALIDHIPIPVGNVLRIRGELAPESAASLYAH HHHEEEEEECCCCCCCCHHHHCCCEEEEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHH EIKRIFGLAEGQFPQFDTMLLGLGNDGHTASLFPASDILGRNDVLVAETWVAKLKQYRIS HHHHHHHCCCCCCCCCCEEEEECCCCCCEEEECCHHHHCCCCCEEEHHHHHHHHHHHHEE LTAPVINNAHSKIFLAAGDDKAGVIRELIEQTGAYQSYPASLINNADWLIDQAAASQLQH EECCHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231; 9298645 [H]