Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is crp [C]
Identifier: 159899403
GI number: 159899403
Start: 3656420
End: 3657076
Strand: Direct
Name: crp [C]
Synonym: Haur_2884
Alternate gene names: 159899403
Gene position: 3656420-3657076 (Clockwise)
Preceding gene: 159899400
Following gene: 159899407
Centisome position: 57.61
GC content: 54.34
Gene sequence:
>657_bases ATGAGTGTTGACGTTGAAGTTTTGCGGCAATTTACCCGTTTTGCTGCACTCGATCCATTAGCTTTGCGCGATCTTGCCCG GGCGATGGAAGTTCGTTCATTTCGGCCAGGCCAATATTTGGTGCTGGAAGATGATCCGCGGTTTGGCTTATTTGGCATTT TAGAGGGGCGGGTGCGGCTTTCACGTACCGCCAGCGATGGCCGTGAGCAGGTGCTCTCAATTGCTGAAACTGGCGAGCTG TTTAATATCGAGCCATTTGTTGATGCTGGGCCAGCTCCGGCAACCGCCCGCGCCATGGCTCCAACCCGCTGTGTGCATTT GCCAACCGCCGCCTTGCCCGATGTGTTACGCAGCCATCCTGAATTTACCTTGATTTTGCTGCGCGATTTGGCGGCTCAAG CGCGTGATTTGGCGGTGTTGCTGGAAGATTTGGCGTTTCGCACGGTGCGAGCACGTTTGGCACGAATTTTATTGCACGAG GCGGCTGATGGAACCGCTGCCTTAACCCATCAAGAATTGGCAGCTCGTGCAGGCACGGTGCGCGAAATTATTGGCCGAAC CTTGCGCCAAATGTCCGATGAGGGCTTGGTGGAGTTGGCTCGTGGCCATGTGTTAGTCTTAGATATGCAGGGTTTGGCAG CGCTGATCGAAAATTAA
Upstream 100 bases:
>100_bases ATAGGGAAGTATACATATTCTTTTCCAACAGAATCTAGCCCCTCATCCCTAGCCCCTGGCCCCTTCAAGTAACAATTTCG CGCATGAGGCGCTGTTTGAT
Downstream 100 bases:
>100_bases GCTAATTCAATATATTCATACACATCATTCAGCTTGAGTTGCGCATTAATCGCCTCAAGTTGAATTGTTTGTTCTAGTGA CCAAAATTCGATCAATAACC
Product: Crp/FNR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator Crp/Fnr Family; CRP/FNR Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein; Crp/Fnr Family Transcriptional Regulator
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MSVDVEVLRQFTRFAALDPLALRDLARAMEVRSFRPGQYLVLEDDPRFGLFGILEGRVRLSRTASDGREQVLSIAETGEL FNIEPFVDAGPAPATARAMAPTRCVHLPTAALPDVLRSHPEFTLILLRDLAAQARDLAVLLEDLAFRTVRARLARILLHE AADGTAALTHQELAARAGTVREIIGRTLRQMSDEGLVELARGHVLVLDMQGLAALIEN
Sequences:
>Translated_218_residues MSVDVEVLRQFTRFAALDPLALRDLARAMEVRSFRPGQYLVLEDDPRFGLFGILEGRVRLSRTASDGREQVLSIAETGEL FNIEPFVDAGPAPATARAMAPTRCVHLPTAALPDVLRSHPEFTLILLRDLAAQARDLAVLLEDLAFRTVRARLARILLHE AADGTAALTHQELAARAGTVREIIGRTLRQMSDEGLVELARGHVLVLDMQGLAALIEN >Mature_217_residues SVDVEVLRQFTRFAALDPLALRDLARAMEVRSFRPGQYLVLEDDPRFGLFGILEGRVRLSRTASDGREQVLSIAETGELF NIEPFVDAGPAPATARAMAPTRCVHLPTAALPDVLRSHPEFTLILLRDLAAQARDLAVLLEDLAFRTVRARLARILLHEA ADGTAALTHQELAARAGTVREIIGRTLRQMSDEGLVELARGHVLVLDMQGLAALIEN
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23920; Mature: 23789
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDVEVLRQFTRFAALDPLALRDLARAMEVRSFRPGQYLVLEDDPRFGLFGILEGRVRL CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHEECCCHHH SRTASDGREQVLSIAETGELFNIEPFVDAGPAPATARAMAPTRCVHLPTAALPDVLRSHP HHCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHCCCHHHEECCHHHHHHHHHCCC EFTLILLRDLAAQARDLAVLLEDLAFRTVRARLARILLHEAADGTAALTHQELAARAGTV CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHH REIIGRTLRQMSDEGLVELARGHVLVLDMQGLAALIEN HHHHHHHHHHHCCCHHHHHHCCCEEEEEHHHHHHHHCC >Mature Secondary Structure SVDVEVLRQFTRFAALDPLALRDLARAMEVRSFRPGQYLVLEDDPRFGLFGILEGRVRL CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHEECCCHHH SRTASDGREQVLSIAETGELFNIEPFVDAGPAPATARAMAPTRCVHLPTAALPDVLRSHP HHCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHCCCHHHEECCHHHHHHHHHCCC EFTLILLRDLAAQARDLAVLLEDLAFRTVRARLARILLHEAADGTAALTHQELAARAGTV CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHH REIIGRTLRQMSDEGLVELARGHVLVLDMQGLAALIEN HHHHHHHHHHHCCCHHHHHHCCCEEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA