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The map label for this gene is yqhM [H]

Identifier: 159899386

GI number: 159899386

Start: 3638451

End: 3639236

Strand: Direct

Name: yqhM [H]

Synonym: Haur_2867

Alternate gene names: 159899386

Gene position: 3638451-3639236 (Clockwise)

Preceding gene: 159899385

Following gene: 159899387

Centisome position: 57.33

GC content: 52.8

Gene sequence:

>786_bases
ATGTGGCGTTACATTGTCTCAGCCGCCGCCGATGGCGCAACCAATATGGCGATTGATCATGCCTTGGTGCTGCATGCCAA
TCAATCGCCATACCCAACCCTACGAATCTATCGTTGGCAGCCTGCTTGTCTTTCAATCGGCGCATTTCAACCCTATAGCG
ATGTTAATGTGGCGGCTTGCCAACAAGCCCAAATCGAGATTGTGCGACGGCCAACTGGTGGTCGTGCGATTTTGCATGAT
GCTGAATTGACCTACTCGATCACGGCCCCCAACAGCAACCCACTGCTTGGGGGTCGGGTTTTAAAAACCTATCGCACCAT
CAGCCATGGATTATTGGTTGGTTTGCGCCAACTGGTAAGTACTGTCGATTGGGCTACTAGCACTAGCGATGGGCCAAAAT
CAGCCGCCTGCTTCGATACTCCCAGCGATTTTGAGATTACGGTAGCTGGGCGTAAATTGGTTGGTAGCGCTCAAACTCGC
ACGCGGGGCGCAATTTTGCAGCATGGCACGGTGCTATTGCAGGCAGATCGCCAGCAGTTGAGCCAAGTGTTGCATTTACC
AACTGAGCTTGATTCAGCAGCGTTGGCCGAGCGTTTGATTGCGCTCGATGAAGCGGCCCAACGCCCCGTGAGCTTTGACG
AGGCGCAACAAGCGATTGTTGCAGGCTTTGCTACAGCTTTCAATCTCGAATTCCAACCTGATCAATTGACTGAGCAAGAG
CTGGCCACAGCTGAGCGCTTGCGCCATGAACGCTATACCAACCCTGAATGGTTACAACGACGCTAA

Upstream 100 bases:

>100_bases
CGATGGAGTAACTTGCAGCGCAAGGAATCTCTCAGGTCAATGGACAGAGATCAGGCATTTTGTATGTCGTGATCTCTTTT
TTATTTAAGCGATTTTGCTC

Downstream 100 bases:

>100_bases
GTGATTTACGAGGTTTTTTGATGAAACAAACACCACTCAATGCACGCCATCGCGCCCTTGGAGCCAGAATGGTCGAGTTC
GGCGGCTGGGACATGCCAGT

Product: biotin/lipoate A/B protein ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MWRYIVSAAADGATNMAIDHALVLHANQSPYPTLRIYRWQPACLSIGAFQPYSDVNVAACQQAQIEIVRRPTGGRAILHD
AELTYSITAPNSNPLLGGRVLKTYRTISHGLLVGLRQLVSTVDWATSTSDGPKSAACFDTPSDFEITVAGRKLVGSAQTR
TRGAILQHGTVLLQADRQQLSQVLHLPTELDSAALAERLIALDEAAQRPVSFDEAQQAIVAGFATAFNLEFQPDQLTEQE
LATAERLRHERYTNPEWLQRR

Sequences:

>Translated_261_residues
MWRYIVSAAADGATNMAIDHALVLHANQSPYPTLRIYRWQPACLSIGAFQPYSDVNVAACQQAQIEIVRRPTGGRAILHD
AELTYSITAPNSNPLLGGRVLKTYRTISHGLLVGLRQLVSTVDWATSTSDGPKSAACFDTPSDFEITVAGRKLVGSAQTR
TRGAILQHGTVLLQADRQQLSQVLHLPTELDSAALAERLIALDEAAQRPVSFDEAQQAIVAGFATAFNLEFQPDQLTEQE
LATAERLRHERYTNPEWLQRR
>Mature_261_residues
MWRYIVSAAADGATNMAIDHALVLHANQSPYPTLRIYRWQPACLSIGAFQPYSDVNVAACQQAQIEIVRRPTGGRAILHD
AELTYSITAPNSNPLLGGRVLKTYRTISHGLLVGLRQLVSTVDWATSTSDGPKSAACFDTPSDFEITVAGRKLVGSAQTR
TRGAILQHGTVLLQADRQQLSQVLHLPTELDSAALAERLIALDEAAQRPVSFDEAQQAIVAGFATAFNLEFQPDQLTEQE
LATAERLRHERYTNPEWLQRR

Specific function: Unknown

COG id: COG0095

COG function: function code H; Lipoate-protein ligase A

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004143 [H]

Pfam domain/function: PF03099 BPL_LipA_LipB [H]

EC number: NA

Molecular weight: Translated: 28716; Mature: 28716

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRYIVSAAADGATNMAIDHALVLHANQSPYPTLRIYRWQPACLSIGAFQPYSDVNVAAC
CCEEEEECCCCCCCHHEEEEEEEEECCCCCCCEEEEEEECHHHEEECCCCCCCCCCHHHH
QQAQIEIVRRPTGGRAILHDAELTYSITAPNSNPLLGGRVLKTYRTISHGLLVGLRQLVS
HCCEEEEEECCCCCEEEEEECEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TVDWATSTSDGPKSAACFDTPSDFEITVAGRKLVGSAQTRTRGAILQHGTVLLQADRQQL
HHHCCCCCCCCCCCCEECCCCCCCEEEEECCCHHCCCCHHHHHHHHHCCEEEEEHHHHHH
SQVLHLPTELDSAALAERLIALDEAAQRPVSFDEAQQAIVAGFATAFNLEFQPDQLTEQE
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECEECCCHHHHHH
LATAERLRHERYTNPEWLQRR
HHHHHHHHHHCCCCHHHHCCC
>Mature Secondary Structure
MWRYIVSAAADGATNMAIDHALVLHANQSPYPTLRIYRWQPACLSIGAFQPYSDVNVAAC
CCEEEEECCCCCCCHHEEEEEEEEECCCCCCCEEEEEEECHHHEEECCCCCCCCCCHHHH
QQAQIEIVRRPTGGRAILHDAELTYSITAPNSNPLLGGRVLKTYRTISHGLLVGLRQLVS
HCCEEEEEECCCCCEEEEEECEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TVDWATSTSDGPKSAACFDTPSDFEITVAGRKLVGSAQTRTRGAILQHGTVLLQADRQQL
HHHCCCCCCCCCCCCEECCCCCCCEEEEECCCHHCCCCHHHHHHHHHCCEEEEEHHHHHH
SQVLHLPTELDSAALAERLIALDEAAQRPVSFDEAQQAIVAGFATAFNLEFQPDQLTEQE
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECEECCCHHHHHH
LATAERLRHERYTNPEWLQRR
HHHHHHHHHHCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]