Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899311
Identifier: 159899311
GI number: 159899311
Start: 3549470
End: 3550660
Strand: Direct
Name: 159899311
Synonym: Haur_2792
Alternate gene names: NA
Gene position: 3549470-3550660 (Clockwise)
Preceding gene: 159899310
Following gene: 159899312
Centisome position: 55.93
GC content: 50.8
Gene sequence:
>1191_bases TTGCGAAAGAAGCTTAACTATTTATTCGGTTTAGGATTTGGCCTGGTACTTTTAATTGGCTGTGGCTCGGATGCTGCGCT TGGTGAAGTGACGCTCAGCGAGCCAATTATCAACTTGAATACTGGCCCGCGCACCACCACCATCAGCTATCTGATTGGGC AGCCAACCAAGGTTTCGATTTGGCTTGAAACCAGTAGTGGTGAGCGTTATGCCTTGCGTCAAGCAGTTACCCGTGAGCCA TCCAAGGATGCGTATCAAGTGCTGTTTGATGGCAGTGTGCCAGTTGATGCTGATACGAATCGTTTATTGCCGAGTGGTAG CTACACAGTGGTGATTGAGGCGGAAAATACTGCGGCCCAACGGCTGAATTTGCAAATCGATCAAGCGCCAAGTGATAGCT TTGACGTGTATGATCTGCGGGTTACGCCCAATCCATTTTCGCCAAATGATGATGCAGTTGAAGATTTTACAACCTTCTCG TATCGTTTGCCGATTACCGCGACCGTCTCGTTGGATGTGATTGATTCAGCCAATGCGACGCGCTATCCAATTCTCAATCG TGAGTTACAAGGCTTGGGCGAACATAGTGAGGCTTGGTCGGGGCGGCCTGTGGTTGGCGGTATTTTGGCCGCAGGAACCT ATCAATATGAATTGCGAGCTGATGATGGCCGTGGCAACCGCGTGACCAAGCGCGGCGATGTGACCCTCAGCAGTGCTGGG ATCGGGGCGCTCGATGTGCTCAGCGTTGAAATTGGCCCTGAACAGATCTTATTAAACGATGTGATCACGGTCACGTTCAA GGTCAAAAATAATAGCGATGTGGCCTTGCGCACCTTTGGGCCAGCTTCGGGCTACACCTATAGCACCAACCAAAGCTACT CGTCGATTGAAAACGAGCAGTATGCTAACCTTGGCGGCGGCTTATGGCGGGTGGCAATCGATTGGGATGGCAATGGTGGC TCGGGTTTTCGCTACCCATTCCGTTGGGCGATTTCGCCACGCAGCCCTGACCAATGGTACGACCCCAACAAATTTGATTA CCTGTATCCAGGCGAAGAAGCCACGATTATTGGGCGCGTGCAAATCAAACAACGCGAAGATCGCATGACCTTTTATGCTG GCGTGGCCCATGAAGGTGTTGATTACCCCACCAATCGACTCAAACCAACCCTAATTCAAGTTTCATTCTAA
Upstream 100 bases:
>100_bases ATTCGCTTTTGCACGTTGTGGTTTGGCGTGTTGCTGGGGATTGTCGCAATGAGCATCTTCGCCCATCGTTATGGCCTGAT CGAGTCGGAGGCAACCAATC
Downstream 100 bases:
>100_bases ATTTAAACCGACAACCCACGGTATTTGCCGTGGGTTTTTATATTTTAGGCTGCGCCATTTTTGGTGAGCAGTTGATAGAC TAATTGATTAAGTCGTGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MRKKLNYLFGLGFGLVLLIGCGSDAALGEVTLSEPIINLNTGPRTTTISYLIGQPTKVSIWLETSSGERYALRQAVTREP SKDAYQVLFDGSVPVDADTNRLLPSGSYTVVIEAENTAAQRLNLQIDQAPSDSFDVYDLRVTPNPFSPNDDAVEDFTTFS YRLPITATVSLDVIDSANATRYPILNRELQGLGEHSEAWSGRPVVGGILAAGTYQYELRADDGRGNRVTKRGDVTLSSAG IGALDVLSVEIGPEQILLNDVITVTFKVKNNSDVALRTFGPASGYTYSTNQSYSSIENEQYANLGGGLWRVAIDWDGNGG SGFRYPFRWAISPRSPDQWYDPNKFDYLYPGEEATIIGRVQIKQREDRMTFYAGVAHEGVDYPTNRLKPTLIQVSF
Sequences:
>Translated_396_residues MRKKLNYLFGLGFGLVLLIGCGSDAALGEVTLSEPIINLNTGPRTTTISYLIGQPTKVSIWLETSSGERYALRQAVTREP SKDAYQVLFDGSVPVDADTNRLLPSGSYTVVIEAENTAAQRLNLQIDQAPSDSFDVYDLRVTPNPFSPNDDAVEDFTTFS YRLPITATVSLDVIDSANATRYPILNRELQGLGEHSEAWSGRPVVGGILAAGTYQYELRADDGRGNRVTKRGDVTLSSAG IGALDVLSVEIGPEQILLNDVITVTFKVKNNSDVALRTFGPASGYTYSTNQSYSSIENEQYANLGGGLWRVAIDWDGNGG SGFRYPFRWAISPRSPDQWYDPNKFDYLYPGEEATIIGRVQIKQREDRMTFYAGVAHEGVDYPTNRLKPTLIQVSF >Mature_396_residues MRKKLNYLFGLGFGLVLLIGCGSDAALGEVTLSEPIINLNTGPRTTTISYLIGQPTKVSIWLETSSGERYALRQAVTREP SKDAYQVLFDGSVPVDADTNRLLPSGSYTVVIEAENTAAQRLNLQIDQAPSDSFDVYDLRVTPNPFSPNDDAVEDFTTFS YRLPITATVSLDVIDSANATRYPILNRELQGLGEHSEAWSGRPVVGGILAAGTYQYELRADDGRGNRVTKRGDVTLSSAG IGALDVLSVEIGPEQILLNDVITVTFKVKNNSDVALRTFGPASGYTYSTNQSYSSIENEQYANLGGGLWRVAIDWDGNGG SGFRYPFRWAISPRSPDQWYDPNKFDYLYPGEEATIIGRVQIKQREDRMTFYAGVAHEGVDYPTNRLKPTLIQVSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43543; Mature: 43543
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKLNYLFGLGFGLVLLIGCGSDAALGEVTLSEPIINLNTGPRTTTISYLIGQPTKVSI CCCCHHHHHHHCCEEEEEEECCCCCCCCEEEECCCEEECCCCCCEEEEEEEECCCEEEEE WLETSSGERYALRQAVTREPSKDAYQVLFDGSVPVDADTNRLLPSGSYTVVIEAENTAAQ EEECCCCCEEHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEE RLNLQIDQAPSDSFDVYDLRVTPNPFSPNDDAVEDFTTFSYRLPITATVSLDVIDSANAT EEEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHEEEEEECCEEEEEEEEEEECCCCC RYPILNRELQGLGEHSEAWSGRPVVGGILAAGTYQYELRADDGRGNRVTKRGDVTLSSAG CCCCCCHHHHCCCCCCCCCCCCCEEEEEEECCEEEEEEEECCCCCCEEEECCCEEEECCC IGALDVLSVEIGPEQILLNDVITVTFKVKNNSDVALRTFGPASGYTYSTNQSYSSIENEQ CCEEEEEEEEECCCEEEEEEEEEEEEEEECCCCEEEEEECCCCCEEEECCCCHHHCCCCH YANLGGGLWRVAIDWDGNGGSGFRYPFRWAISPRSPDQWYDPNKFDYLYPGEEATIIGRV HHCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCEEEEEEE QIKQREDRMTFYAGVAHEGVDYPTNRLKPTLIQVSF EEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MRKKLNYLFGLGFGLVLLIGCGSDAALGEVTLSEPIINLNTGPRTTTISYLIGQPTKVSI CCCCHHHHHHHCCEEEEEEECCCCCCCCEEEECCCEEECCCCCCEEEEEEEECCCEEEEE WLETSSGERYALRQAVTREPSKDAYQVLFDGSVPVDADTNRLLPSGSYTVVIEAENTAAQ EEECCCCCEEHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEE RLNLQIDQAPSDSFDVYDLRVTPNPFSPNDDAVEDFTTFSYRLPITATVSLDVIDSANAT EEEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHEEEEEECCEEEEEEEEEEECCCCC RYPILNRELQGLGEHSEAWSGRPVVGGILAAGTYQYELRADDGRGNRVTKRGDVTLSSAG CCCCCCHHHHCCCCCCCCCCCCCEEEEEEECCEEEEEEEECCCCCCEEEECCCEEEECCC IGALDVLSVEIGPEQILLNDVITVTFKVKNNSDVALRTFGPASGYTYSTNQSYSSIENEQ CCEEEEEEEEECCCEEEEEEEEEEEEEEECCCCEEEEEECCCCCEEEECCCCHHHCCCCH YANLGGGLWRVAIDWDGNGGSGFRYPFRWAISPRSPDQWYDPNKFDYLYPGEEATIIGRV HHCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCEEEEEEE QIKQREDRMTFYAGVAHEGVDYPTNRLKPTLIQVSF EEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA