Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899302
Identifier: 159899302
GI number: 159899302
Start: 3540461
End: 3540802
Strand: Direct
Name: 159899302
Synonym: Haur_2783
Alternate gene names: NA
Gene position: 3540461-3540802 (Clockwise)
Preceding gene: 159899301
Following gene: 159899310
Centisome position: 55.79
GC content: 44.44
Gene sequence:
>342_bases GTGATTCGCATCGAGGAAAACAACCGACCAAATATTAAATTTCTCAACTACAGCTTGTTTGCAGGCGGCCAAGGCTTGTT TTTCTTGATCAATAGGTGGAGTGGTTGGGCTTGGTACAATGGTTACAGTCGGTTGGGTCGTAGGTTGGGTCGTTTGGTTG GCACAGCCACCAACAAGGCTGACGGCCAAAAGTGCAATCCAGATCAAGCTGCGCATACAGCGTCCTCATCTCTCAATGAT ACTCATCAATTGGGCAGAGTATACCCGATTAACCAGTTTTTGCCTACAAACAATTCATTCAGGATTGATAATTCAAGCAC AAATGCTTTAATCTGCAAGTAA
Upstream 100 bases:
>100_bases AAACCCATGGTTCGGACAAAATCGTTTGGGCAGTCATCCGACGCATAGCTAAAGCGGTTGAGCGAATGCCCCGAACATGG GGTTCAGGTTTGAGGATTGT
Downstream 100 bases:
>100_bases TTGGTATATTGTATTCATTGCAATTTCCATTTCTAGGAGAGTAAAACAATCCAGATCAAGCTGCGCCAATGTTTCTGGAA TATGGCGAAAGCTAACGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MIRIEENNRPNIKFLNYSLFAGGQGLFFLINRWSGWAWYNGYSRLGRRLGRLVGTATNKADGQKCNPDQAAHTASSSLND THQLGRVYPINQFLPTNNSFRIDNSSTNALICK
Sequences:
>Translated_113_residues MIRIEENNRPNIKFLNYSLFAGGQGLFFLINRWSGWAWYNGYSRLGRRLGRLVGTATNKADGQKCNPDQAAHTASSSLND THQLGRVYPINQFLPTNNSFRIDNSSTNALICK >Mature_113_residues MIRIEENNRPNIKFLNYSLFAGGQGLFFLINRWSGWAWYNGYSRLGRRLGRLVGTATNKADGQKCNPDQAAHTASSSLND THQLGRVYPINQFLPTNNSFRIDNSSTNALICK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12752; Mature: 12752
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRIEENNRPNIKFLNYSLFAGGQGLFFLINRWSGWAWYNGYSRLGRRLGRLVGTATNKA CEEECCCCCCCEEEEEEEEEECCCEEEEEEECCCCEEEECCHHHHHHHHHHHHCCCCCCC DGQKCNPDQAAHTASSSLNDTHQLGRVYPINQFLPTNNSFRIDNSSTNALICK CCCCCCCCHHHHHHCCCCCCHHHCCCEEECHHCCCCCCCEEEECCCCCEEEEC >Mature Secondary Structure MIRIEENNRPNIKFLNYSLFAGGQGLFFLINRWSGWAWYNGYSRLGRRLGRLVGTATNKA CEEECCCCCCCEEEEEEEEEECCCEEEEEEECCCCEEEECCHHHHHHHHHHHHCCCCCCC DGQKCNPDQAAHTASSSLNDTHQLGRVYPINQFLPTNNSFRIDNSSTNALICK CCCCCCCCHHHHHHCCCCCCHHHCCCEEECHHCCCCCCCEEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA