Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899274
Identifier: 159899274
GI number: 159899274
Start: 3511067
End: 3511246
Strand: Direct
Name: 159899274
Synonym: Haur_2755
Alternate gene names: NA
Gene position: 3511067-3511246 (Clockwise)
Preceding gene: 159899273
Following gene: 159899275
Centisome position: 55.32
GC content: 37.22
Gene sequence:
>180_bases ATGTATAAATACTTAACTGATCGAATTGGGAACTATACAGAAATTGAACCCTATTTTGATCTTTGGCGATCACTTCAGAT TAGAAATGGTATATTAATGGTTATCGCGATTGAGCACGATAGTTTAGATCATACTGTTCCACTCATTCCAAAAGGAACAG ATGGTCGGGCTTTGCGGTAG
Upstream 100 bases:
>100_bases AGGAAATATCTCCTCAACCCATCGGACATTAAATAAGCTAGCACTTGGGATGCTAAAAGAAACAATTATCGGTGGGGTAC TAATCCTTCCTACTCGTAGC
Downstream 100 bases:
>100_bases AATAAAAAAGAATGTTCTGATTTGACTAGGATAGGATTTGTATATGCCCGATCATCCATCAAAACTATTCGATATTCAGC AGAGTTTGGAATATCATCAT
Product: BamHI-like type II restriction endonuclease
Products: NA
Alternate protein names: Restriction Endonuclease BamHI
Number of amino acids: Translated: 59; Mature: 59
Protein sequence:
>59_residues MYKYLTDRIGNYTEIEPYFDLWRSLQIRNGILMVIAIEHDSLDHTVPLIPKGTDGRALR
Sequences:
>Translated_59_residues MYKYLTDRIGNYTEIEPYFDLWRSLQIRNGILMVIAIEHDSLDHTVPLIPKGTDGRALR >Mature_59_residues MYKYLTDRIGNYTEIEPYFDLWRSLQIRNGILMVIAIEHDSLDHTVPLIPKGTDGRALR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6920; Mature: 6920
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKYLTDRIGNYTEIEPYFDLWRSLQIRNGILMVIAIEHDSLDHTVPLIPKGTDGRALR CCCCCCCCCCCEEECCHHHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCC >Mature Secondary Structure MYKYLTDRIGNYTEIEPYFDLWRSLQIRNGILMVIAIEHDSLDHTVPLIPKGTDGRALR CCCCCCCCCCCEEECCHHHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA