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The map label for this gene is ydiF [H]

Identifier: 159899246

GI number: 159899246

Start: 3482884

End: 3484833

Strand: Direct

Name: ydiF [H]

Synonym: Haur_2727

Alternate gene names: 159899246

Gene position: 3482884-3484833 (Clockwise)

Preceding gene: 159899244

Following gene: 159899247

Centisome position: 54.88

GC content: 52.31

Gene sequence:

>1950_bases
ATGTCTGTCTTAATTGCTAATAATCTCGGCAAATGGTTTGGAGCCGAACAAATATTTGAAGCTGTCTCGTTCCAAGTGGC
TCGTGGCGACAAAATCGCCTTGGTTGGGGTCAATGGCGCGGGCAAATCTACGTTAATGAAAATTATCGCTGGCATCGATA
GCTCCAGCGAAGGTTCGTTGCATCGCTCACGCGGTTTGCGCGTGACCTACCAAGCTCAAGAAGCAACGTTCGCCGCCGAT
TCGACCTTAGAGCGCGAAGCGCATGCCGCCTTTGCTGCGCTGAGCAACATCGAAGACGAAATGCGCCAGCTCGAAGTTAC
AATCGCCAATCCCGATGATCCCCAATGGGAACAGGCGATGGAGCGCTACGGCGAGTTGCAACATCGCTATGAGCATGCTG
GCGGCTATGAAAAAGAACATCGCATTACCCGTACCTTCCAAGGTTTGGGCTTTACTGATGCTCAATGGACGCAGCCGATT
GCTCAGTTTAGTGGTGGTCAACGCACCCGCGCCGCGCTTGCCGTGGCCCTACTAGGAGATCCCGATATTCTATTGCTTGA
CGAGCCGACCAACCACTTGGATATGGCGGCCTTGGAATGGCTCGAAGACTTTTTGCGCGATTGGGAAGGCACATTGATCG
TGATTTCCCACGACCGCTACTTCCTTGATCGGGTTTCAAATCGCACTTGGGAAATGGAGTGGGGCCGCTTGCAGGATTAC
GCCGCGCCCTATTCCAAATATCAAACGATCAAGGCTGAACGCATGGAGCGTTTAGCCAAAGAGTTTGAAGCCCAACAACA
GATGATCGCCAAAACCGAGGAATTTATTCGGCGCTTCAAGGCTGGGGTTCGTGCCCGCGAAGCCAAAGGCCGCGAACGCC
GACTTAATCGCTTTAAAGAAGGCTGGAATAGTATTCACGGCCATGTTAAAGCGATTGAAGGCCCGCAACGCCGCAAAGAA
CTTAAATTTGCCTTGCAAACCAACCTTCGTTCTGGCGATGTTGTGCTAGCGCTCGATCAATTGGGAGTTGGCTATACCAA
CAACGGACAAACCACCACTTTGCTACAATTTGATGAATTGTATGTGATGCGCGGCGAACGGGTGGCCTTGCTGGGGCCAA
ATGGCAGCGGCAAATCAACCTTGCTCAAAACCGTGGTCGATCAACTCAAGCCCTTGGCTGGTAGTTTTGAGGTTGGAGCC
AACGTACAGCTTGGCTATTATGCCCAAGGTCACGAAGGCCTCGATTTCAACAACACGATTTTGGATGAAGTGCTGCGCCA
TAACCCGCAAATGGGCGAAACCCGGGCACGTACCATGCTCGGCAACTTCTTATTTACCAGCGATGATGTATTCAAGCAAA
TTCGCGATCTTTCGGGCGGCGAGCGTTCGCGAGTAGCCTTATCGCAGTTGATGCTCAATGGTGGCAACTTCTTGATGCTC
GACGAGCCAACCAACCACTTGGATATTCAGGCCCGCGAGGCGCTTGAAGGCGTGCTTAACGATTTTAATGGTACCTTACT
GTTTGTCTCGCACGACCGCTATTTTATCGATGCAGTCGCTGATACCTTGTGGTTGGTCAACGATGATGGCAGCATTACGC
GCTTTCCAGGCAATTATTCGGCGCTTGCTGCTCAGCGAGAAAACGAACGTCGTGCTGCTGAAGCCGCCGCGATCGAGGCC
AAACGCGCTGCCGAACGCCAAACCAAGGCCAACAAAGCCAATCCAACGCCTGTGCCAGCCAGTGCCAAGCGCCAATTGCA
AAACCTTGAGCGCGAAATTGCCAGCCTAGAGCAACGCAAAGCCGCGCTTGATGCCGAAATTATGCAAGCATCAATTAAGC
AAGATAGCCGCAAAATTGGCGAGCTTGGCACGCAATATGCCGCACTCGAAAACCAACTCAGCGATTATTACACCCGCTGG
GAGCAATTGGCCGAAGAAGTTGGAGCCTAA

Upstream 100 bases:

>100_bases
TTGTACTACTCGCTGAAGCGCATGCTACGTGCGCCTCAAGACTGATAGCTAAAACTTAAAGCAATGGTATGATGTGTGAA
ACCTTGAGGAGCACCCGATA

Downstream 100 bases:

>100_bases
TTAAAGGCAAAAGTCAGAAGGCAAAAATCAAAAGCGCAGAGGCGCAGAGAAAAGAAGGGTACGAAGATTTAGGGTTTTGG
CTGTAAACGTTGTTAATATC

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 649; Mature: 648

Protein sequence:

>649_residues
MSVLIANNLGKWFGAEQIFEAVSFQVARGDKIALVGVNGAGKSTLMKIIAGIDSSSEGSLHRSRGLRVTYQAQEATFAAD
STLEREAHAAFAALSNIEDEMRQLEVTIANPDDPQWEQAMERYGELQHRYEHAGGYEKEHRITRTFQGLGFTDAQWTQPI
AQFSGGQRTRAALAVALLGDPDILLLDEPTNHLDMAALEWLEDFLRDWEGTLIVISHDRYFLDRVSNRTWEMEWGRLQDY
AAPYSKYQTIKAERMERLAKEFEAQQQMIAKTEEFIRRFKAGVRAREAKGRERRLNRFKEGWNSIHGHVKAIEGPQRRKE
LKFALQTNLRSGDVVLALDQLGVGYTNNGQTTTLLQFDELYVMRGERVALLGPNGSGKSTLLKTVVDQLKPLAGSFEVGA
NVQLGYYAQGHEGLDFNNTILDEVLRHNPQMGETRARTMLGNFLFTSDDVFKQIRDLSGGERSRVALSQLMLNGGNFLML
DEPTNHLDIQAREALEGVLNDFNGTLLFVSHDRYFIDAVADTLWLVNDDGSITRFPGNYSALAAQRENERRAAEAAAIEA
KRAAERQTKANKANPTPVPASAKRQLQNLEREIASLEQRKAALDAEIMQASIKQDSRKIGELGTQYAALENQLSDYYTRW
EQLAEEVGA

Sequences:

>Translated_649_residues
MSVLIANNLGKWFGAEQIFEAVSFQVARGDKIALVGVNGAGKSTLMKIIAGIDSSSEGSLHRSRGLRVTYQAQEATFAAD
STLEREAHAAFAALSNIEDEMRQLEVTIANPDDPQWEQAMERYGELQHRYEHAGGYEKEHRITRTFQGLGFTDAQWTQPI
AQFSGGQRTRAALAVALLGDPDILLLDEPTNHLDMAALEWLEDFLRDWEGTLIVISHDRYFLDRVSNRTWEMEWGRLQDY
AAPYSKYQTIKAERMERLAKEFEAQQQMIAKTEEFIRRFKAGVRAREAKGRERRLNRFKEGWNSIHGHVKAIEGPQRRKE
LKFALQTNLRSGDVVLALDQLGVGYTNNGQTTTLLQFDELYVMRGERVALLGPNGSGKSTLLKTVVDQLKPLAGSFEVGA
NVQLGYYAQGHEGLDFNNTILDEVLRHNPQMGETRARTMLGNFLFTSDDVFKQIRDLSGGERSRVALSQLMLNGGNFLML
DEPTNHLDIQAREALEGVLNDFNGTLLFVSHDRYFIDAVADTLWLVNDDGSITRFPGNYSALAAQRENERRAAEAAAIEA
KRAAERQTKANKANPTPVPASAKRQLQNLEREIASLEQRKAALDAEIMQASIKQDSRKIGELGTQYAALENQLSDYYTRW
EQLAEEVGA
>Mature_648_residues
SVLIANNLGKWFGAEQIFEAVSFQVARGDKIALVGVNGAGKSTLMKIIAGIDSSSEGSLHRSRGLRVTYQAQEATFAADS
TLEREAHAAFAALSNIEDEMRQLEVTIANPDDPQWEQAMERYGELQHRYEHAGGYEKEHRITRTFQGLGFTDAQWTQPIA
QFSGGQRTRAALAVALLGDPDILLLDEPTNHLDMAALEWLEDFLRDWEGTLIVISHDRYFLDRVSNRTWEMEWGRLQDYA
APYSKYQTIKAERMERLAKEFEAQQQMIAKTEEFIRRFKAGVRAREAKGRERRLNRFKEGWNSIHGHVKAIEGPQRRKEL
KFALQTNLRSGDVVLALDQLGVGYTNNGQTTTLLQFDELYVMRGERVALLGPNGSGKSTLLKTVVDQLKPLAGSFEVGAN
VQLGYYAQGHEGLDFNNTILDEVLRHNPQMGETRARTMLGNFLFTSDDVFKQIRDLSGGERSRVALSQLMLNGGNFLMLD
EPTNHLDIQAREALEGVLNDFNGTLLFVSHDRYFIDAVADTLWLVNDDGSITRFPGNYSALAAQRENERRAAEAAAIEAK
RAAERQTKANKANPTPVPASAKRQLQNLEREIASLEQRKAALDAEIMQASIKQDSRKIGELGTQYAALENQLSDYYTRWE
QLAEEVGA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=544, Percent_Identity=32.7205882352941, Blast_Score=251, Evalue=1e-66,
Organism=Homo sapiens, GI10947137, Length=538, Percent_Identity=31.5985130111524, Blast_Score=235, Evalue=1e-61,
Organism=Homo sapiens, GI27881506, Length=538, Percent_Identity=31.5985130111524, Blast_Score=235, Evalue=1e-61,
Organism=Homo sapiens, GI10947135, Length=528, Percent_Identity=30.8712121212121, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI69354671, Length=528, Percent_Identity=30.8712121212121, Blast_Score=194, Evalue=2e-49,
Organism=Escherichia coli, GI2367384, Length=552, Percent_Identity=34.2391304347826, Blast_Score=295, Evalue=5e-81,
Organism=Escherichia coli, GI1789751, Length=606, Percent_Identity=31.6831683168317, Blast_Score=289, Evalue=3e-79,
Organism=Escherichia coli, GI1787041, Length=541, Percent_Identity=33.086876155268, Blast_Score=285, Evalue=5e-78,
Organism=Escherichia coli, GI1787182, Length=655, Percent_Identity=31.4503816793893, Blast_Score=272, Evalue=6e-74,
Organism=Escherichia coli, GI1787029, Length=253, Percent_Identity=24.5059288537549, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1788165, Length=184, Percent_Identity=28.804347826087, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI48995001, Length=226, Percent_Identity=29.646017699115, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1787105, Length=217, Percent_Identity=29.0322580645161, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788225, Length=273, Percent_Identity=24.5421245421245, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1788506, Length=266, Percent_Identity=25.187969924812, Blast_Score=70, Evalue=6e-13,
Organism=Escherichia coli, GI1789593, Length=270, Percent_Identity=25.1851851851852, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1788761, Length=203, Percent_Identity=30.0492610837438, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=525, Percent_Identity=32.1904761904762, Blast_Score=246, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI17559834, Length=533, Percent_Identity=30.7692307692308, Blast_Score=231, Evalue=7e-61,
Organism=Caenorhabditis elegans, GI17555318, Length=533, Percent_Identity=27.9549718574109, Blast_Score=219, Evalue=4e-57,
Organism=Saccharomyces cerevisiae, GI6321121, Length=564, Percent_Identity=29.2553191489362, Blast_Score=240, Evalue=6e-64,
Organism=Saccharomyces cerevisiae, GI6320874, Length=538, Percent_Identity=30.8550185873606, Blast_Score=206, Evalue=6e-54,
Organism=Saccharomyces cerevisiae, GI6323278, Length=399, Percent_Identity=23.3082706766917, Blast_Score=106, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6324314, Length=235, Percent_Identity=29.3617021276596, Blast_Score=105, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6325030, Length=282, Percent_Identity=27.3049645390071, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24666836, Length=583, Percent_Identity=31.7324185248714, Blast_Score=254, Evalue=1e-67,
Organism=Drosophila melanogaster, GI24642252, Length=545, Percent_Identity=30.2752293577982, Blast_Score=235, Evalue=6e-62,
Organism=Drosophila melanogaster, GI18859989, Length=545, Percent_Identity=30.2752293577982, Blast_Score=235, Evalue=6e-62,
Organism=Drosophila melanogaster, GI24641342, Length=556, Percent_Identity=29.6762589928058, Blast_Score=229, Evalue=4e-60,
Organism=Drosophila melanogaster, GI28574259, Length=182, Percent_Identity=29.1208791208791, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 72907; Mature: 72776

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLIANNLGKWFGAEQIFEAVSFQVARGDKIALVGVNGAGKSTLMKIIAGIDSSSEGSL
CEEEEECCCHHHCCHHHHHHHHHHEEECCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCH
HRSRGLRVTYQAQEATFAADSTLEREAHAAFAALSNIEDEMRQLEVTIANPDDPQWEQAM
HHHCCCEEEEECCHHHEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHH
ERYGELQHRYEHAGGYEKEHRITRTFQGLGFTDAQWTQPIAQFSGGQRTRAALAVALLGD
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHEEEEEECC
PDILLLDEPTNHLDMAALEWLEDFLRDWEGTLIVISHDRYFLDRVSNRTWEMEWGRLQDY
CCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCEEEECCCHHHHH
AAPYSKYQTIKAERMERLAKEFEAQQQMIAKTEEFIRRFKAGVRAREAKGRERRLNRFKE
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHH
GWNSIHGHVKAIEGPQRRKELKFALQTNLRSGDVVLALDQLGVGYTNNGQTTTLLQFDEL
HHHHHCCCEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCE
YVMRGERVALLGPNGSGKSTLLKTVVDQLKPLAGSFEVGANVQLGYYAQGHEGLDFNNTI
EEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEECCCCEEEEEEECCCCCCCCCHHH
LDEVLRHNPQMGETRARTMLGNFLFTSDDVFKQIRDLSGGERSRVALSQLMLNGGNFLML
HHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEE
DEPTNHLDIQAREALEGVLNDFNGTLLFVSHDRYFIDAVADTLWLVNDDGSITRFPGNYS
CCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCEEEEECCCCCEEECCCCHH
ALAAQRENERRAAEAAAIEAKRAAERQTKANKANPTPVPASAKRQLQNLEREIASLEQRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AALDAEIMQASIKQDSRKIGELGTQYAALENQLSDYYTRWEQLAEEVGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVLIANNLGKWFGAEQIFEAVSFQVARGDKIALVGVNGAGKSTLMKIIAGIDSSSEGSL
EEEEECCCHHHCCHHHHHHHHHHEEECCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCH
HRSRGLRVTYQAQEATFAADSTLEREAHAAFAALSNIEDEMRQLEVTIANPDDPQWEQAM
HHHCCCEEEEECCHHHEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHH
ERYGELQHRYEHAGGYEKEHRITRTFQGLGFTDAQWTQPIAQFSGGQRTRAALAVALLGD
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHEEEEEECC
PDILLLDEPTNHLDMAALEWLEDFLRDWEGTLIVISHDRYFLDRVSNRTWEMEWGRLQDY
CCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCEEEECCCHHHHH
AAPYSKYQTIKAERMERLAKEFEAQQQMIAKTEEFIRRFKAGVRAREAKGRERRLNRFKE
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHH
GWNSIHGHVKAIEGPQRRKELKFALQTNLRSGDVVLALDQLGVGYTNNGQTTTLLQFDEL
HHHHHCCCEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCE
YVMRGERVALLGPNGSGKSTLLKTVVDQLKPLAGSFEVGANVQLGYYAQGHEGLDFNNTI
EEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEECCCCEEEEEEECCCCCCCCCHHH
LDEVLRHNPQMGETRARTMLGNFLFTSDDVFKQIRDLSGGERSRVALSQLMLNGGNFLML
HHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEE
DEPTNHLDIQAREALEGVLNDFNGTLLFVSHDRYFIDAVADTLWLVNDDGSITRFPGNYS
CCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCEEEEECCCCCEEECCCCHH
ALAAQRENERRAAEAAAIEAKRAAERQTKANKANPTPVPASAKRQLQNLEREIASLEQRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AALDAEIMQASIKQDSRKIGELGTQYAALENQLSDYYTRWEQLAEEVGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]