| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898376
Identifier: 159898376
GI number: 159898376
Start: 2153364
End: 2154827
Strand: Reverse
Name: 159898376
Synonym: Haur_1852
Alternate gene names: NA
Gene position: 2154827-2153364 (Counterclockwise)
Preceding gene: 159898377
Following gene: 159898373
Centisome position: 33.95
GC content: 44.4
Gene sequence:
>1464_bases ATGAATACGAAGCGAATCATAGCTTGTTGGTTGGTCGCAATTATTGTCAGTATTGGTTTTGGCTCTCCTCAATCAAGTCA AGCGCAGAACGCTCAAGCGCAGCCTGCCCAGATTACTATCGATGGCTTAGCCGTGAAACTGCCATTTCAGCCAGGCGCAG AATGGCGAGTCACAGCAGGCTGGGAGGCGGCAAATCATCAACAAGCTTGGAATTATTATGCAGTTGATGTCGTACCAGTG AATCAAGCGTGCTTAGGCCGACCGATTTTAGCGATGGCACATGGCTTTATTGAATCGAATAATGGTCACGAACTTCAGAT TGATCATCGCGTGAATAATTACCGTTCATTATATTCACACTTAGATACCGTAAGTCCTGGTTTAGCGGTTGGAACGGAAG TGTTTCAAGGTCAACAAATTGGCACCTGTGGTGGATATCCAAATTTTGCGCCACACCTACACTTTCAAATCTTTCAAGGG GCACGGATGGCGAGTAGTGGCGTGATTCCGATACCGATTGATGGGATCACTGATGCTAATCGGCTGCGTTCAGGCCAACG TGGCTTGTATTCAACTAATCAATCCCAACCACAATTGCCGACTGCTAATTATCGACCATTAAGGCTATTTTGGCATGGCG AACGTGGAGATAACTTTACAACTGCCTCAACACAAGCAGAAATCTCTGCGGCGGCAAATGCATACACTTCAATTCGAACC GAAGGGTTTGTATTTAGTCATGCAGGATCAGGTAGAGTACCACTCCAACAGTATTGGCATAGTGGTAGGGGTGACAATAT CTTAGTCGCCACTAATGCAGGAATCAATGATGCACGTAATGCTGGCTATAGTTTTGTGCGAACCGAAGGCTATATTTACG CTACACAGCAACAACATACTGTACCATTGAAACTATTTTGGAGTGATACACGACAGGATAATTTTACAACCTCGACTGCA GAAGGCGAACAATCTGCATTAGCAGCTGGGTATAGTTTTGTGCGAATCGAAGGTTATGTTTTTGTTGCACGCCCCCTACA GCTCTACTGGCATTCCGATCGTGGTGATAATTTTCCAACTGCAACATCTGAGGGCATTGCTTCTGCTCATATATCAGCCT ATGGGTTTATTCGAACTGAGGGCTATGTTTTTGCTGATCATTTGCCTGATACAGTTCCATTAAAATTATTTTGGAGTGAT GCCCGACAAGATAACTACATTACCGCAACAGCTGAAGGCGAACAATCTGCACTAATGGCTGGATATGGCTTTGTGCGAAT TGAAGGTTATGTTTTACCAACCAATGGTGCGGATCTACGACCTTTAGAGCTATTTTATCATGATGGACGTGGAGATAATT TTACAACTGGTACAGTAGCAGGAGCTACCGATGCGATTAACCATAACTACCAGTTGATTCGGCATGAAGGTTATATTTAT GGCACTTTGCCTGCTGGATATTAG
Upstream 100 bases:
>100_bases TGTTATGAGTAAATCAATATTCGAAATCTATTTGGAGGTGGGTTCAATTGGCATGGAGTAGTTGATCAGGCTGGACGAAT TATAAAGTTGTGAGGTGGAT
Downstream 100 bases:
>100_bases ATAATAACTCAGTTTTCAAATCGATGCCCTAGACTACTAAACAGAATCCTCATGGAAGTCAATTATATCTGCCATGAGGA TTCTTTATTTACCTTATTAA
Product: peptidase M23B
Products: NA
Alternate protein names: Serine/Threonine Protein Kinase
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MNTKRIIACWLVAIIVSIGFGSPQSSQAQNAQAQPAQITIDGLAVKLPFQPGAEWRVTAGWEAANHQQAWNYYAVDVVPV NQACLGRPILAMAHGFIESNNGHELQIDHRVNNYRSLYSHLDTVSPGLAVGTEVFQGQQIGTCGGYPNFAPHLHFQIFQG ARMASSGVIPIPIDGITDANRLRSGQRGLYSTNQSQPQLPTANYRPLRLFWHGERGDNFTTASTQAEISAAANAYTSIRT EGFVFSHAGSGRVPLQQYWHSGRGDNILVATNAGINDARNAGYSFVRTEGYIYATQQQHTVPLKLFWSDTRQDNFTTSTA EGEQSALAAGYSFVRIEGYVFVARPLQLYWHSDRGDNFPTATSEGIASAHISAYGFIRTEGYVFADHLPDTVPLKLFWSD ARQDNYITATAEGEQSALMAGYGFVRIEGYVLPTNGADLRPLELFYHDGRGDNFTTGTVAGATDAINHNYQLIRHEGYIY GTLPAGY
Sequences:
>Translated_487_residues MNTKRIIACWLVAIIVSIGFGSPQSSQAQNAQAQPAQITIDGLAVKLPFQPGAEWRVTAGWEAANHQQAWNYYAVDVVPV NQACLGRPILAMAHGFIESNNGHELQIDHRVNNYRSLYSHLDTVSPGLAVGTEVFQGQQIGTCGGYPNFAPHLHFQIFQG ARMASSGVIPIPIDGITDANRLRSGQRGLYSTNQSQPQLPTANYRPLRLFWHGERGDNFTTASTQAEISAAANAYTSIRT EGFVFSHAGSGRVPLQQYWHSGRGDNILVATNAGINDARNAGYSFVRTEGYIYATQQQHTVPLKLFWSDTRQDNFTTSTA EGEQSALAAGYSFVRIEGYVFVARPLQLYWHSDRGDNFPTATSEGIASAHISAYGFIRTEGYVFADHLPDTVPLKLFWSD ARQDNYITATAEGEQSALMAGYGFVRIEGYVLPTNGADLRPLELFYHDGRGDNFTTGTVAGATDAINHNYQLIRHEGYIY GTLPAGY >Mature_487_residues MNTKRIIACWLVAIIVSIGFGSPQSSQAQNAQAQPAQITIDGLAVKLPFQPGAEWRVTAGWEAANHQQAWNYYAVDVVPV NQACLGRPILAMAHGFIESNNGHELQIDHRVNNYRSLYSHLDTVSPGLAVGTEVFQGQQIGTCGGYPNFAPHLHFQIFQG ARMASSGVIPIPIDGITDANRLRSGQRGLYSTNQSQPQLPTANYRPLRLFWHGERGDNFTTASTQAEISAAANAYTSIRT EGFVFSHAGSGRVPLQQYWHSGRGDNILVATNAGINDARNAGYSFVRTEGYIYATQQQHTVPLKLFWSDTRQDNFTTSTA EGEQSALAAGYSFVRIEGYVFVARPLQLYWHSDRGDNFPTATSEGIASAHISAYGFIRTEGYVFADHLPDTVPLKLFWSD ARQDNYITATAEGEQSALMAGYGFVRIEGYVLPTNGADLRPLELFYHDGRGDNFTTGTVAGATDAINHNYQLIRHEGYIY GTLPAGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53445; Mature: 53445
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKRIIACWLVAIIVSIGFGSPQSSQAQNAQAQPAQITIDGLAVKLPFQPGAEWRVTAG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEC WEAANHQQAWNYYAVDVVPVNQACLGRPILAMAHGFIESNNGHELQIDHRVNNYRSLYSH CCCCCCCCCCEEEEEEEEECCHHHHCCHHHHHHHHHEECCCCCEEEEECCHHHHHHHHHH LDTVSPGLAVGTEVFQGQQIGTCGGYPNFAPHLHFQIFQGARMASSGVIPIPIDGITDAN HHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHCCCEEEEECCCCCCHH RLRSGQRGLYSTNQSQPQLPTANYRPLRLFWHGERGDNFTTASTQAEISAAANAYTSIRT HHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCHHHHHHHHHHHEEEC EGFVFSHAGSGRVPLQQYWHSGRGDNILVATNAGINDARNAGYSFVRTEGYIYATQQQHT CCEEEECCCCCCCCHHHHHCCCCCCEEEEEECCCCCCHHHCCCEEEEECCEEEEECCCCC VPLKLFWSDTRQDNFTTSTAEGEQSALAAGYSFVRIEGYVFVARPLQLYWHSDRGDNFPT EEEEEEECCCCCCCCEECCCCCCHHHHHCCEEEEEEEEEEEEEEEEEEEEECCCCCCCCC ATSEGIASAHISAYGFIRTEGYVFADHLPDTVPLKLFWSDARQDNYITATAEGEQSALMA CCCCCCCEEEEEEEEEEEECCEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCCCEEEE GYGFVRIEGYVLPTNGADLRPLELFYHDGRGDNFTTGTVAGATDAINHNYQLIRHEGYIY CCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCEEECEECCCHHHCCCCEEEEEECCEEE GTLPAGY EECCCCC >Mature Secondary Structure MNTKRIIACWLVAIIVSIGFGSPQSSQAQNAQAQPAQITIDGLAVKLPFQPGAEWRVTAG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEC WEAANHQQAWNYYAVDVVPVNQACLGRPILAMAHGFIESNNGHELQIDHRVNNYRSLYSH CCCCCCCCCCEEEEEEEEECCHHHHCCHHHHHHHHHEECCCCCEEEEECCHHHHHHHHHH LDTVSPGLAVGTEVFQGQQIGTCGGYPNFAPHLHFQIFQGARMASSGVIPIPIDGITDAN HHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHCCCEEEEECCCCCCHH RLRSGQRGLYSTNQSQPQLPTANYRPLRLFWHGERGDNFTTASTQAEISAAANAYTSIRT HHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCHHHHHHHHHHHEEEC EGFVFSHAGSGRVPLQQYWHSGRGDNILVATNAGINDARNAGYSFVRTEGYIYATQQQHT CCEEEECCCCCCCCHHHHHCCCCCCEEEEEECCCCCCHHHCCCEEEEECCEEEEECCCCC VPLKLFWSDTRQDNFTTSTAEGEQSALAAGYSFVRIEGYVFVARPLQLYWHSDRGDNFPT EEEEEEECCCCCCCCEECCCCCCHHHHHCCEEEEEEEEEEEEEEEEEEEEECCCCCCCCC ATSEGIASAHISAYGFIRTEGYVFADHLPDTVPLKLFWSDARQDNYITATAEGEQSALMA CCCCCCCEEEEEEEEEEEECCEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCCCEEEE GYGFVRIEGYVLPTNGADLRPLELFYHDGRGDNFTTGTVAGATDAINHNYQLIRHEGYIY CCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCEEECEECCCHHHCCCCEEEEEECCEEE GTLPAGY EECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA