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The map label for this gene is yidE [C]

Identifier: 159898372

GI number: 159898372

Start: 2148575

End: 2150212

Strand: Reverse

Name: yidE [C]

Synonym: Haur_1848

Alternate gene names: 159898372

Gene position: 2150212-2148575 (Counterclockwise)

Preceding gene: 159898373

Following gene: 159898371

Centisome position: 33.88

GC content: 50.24

Gene sequence:

>1638_bases
ATGTTGGACTTGCTAGCGTCGAATCCACTATTGCTGCTGTTTGTAGTTGCAGCAATCGGCTATCCTTTAGGGCAATTGAA
TCTCGGCGGTGTACGCCTCGGCGTTGCCGCCGTTTTGTTTGTGGGCTTGGCAATTGGCTCGCTCGACGAGCGCCTAAAAC
TGCCCGAAGTGCTGTATCAATTTGGCTTGGTGATGTTTGTTTACACCGTCGGGTTGAGCAGCGGCCATCAGTTTTTTCGC
TCGTGGAAGAGCAAAGGCTTACGCGATAATCTCTTTATTGGTGGGATGATCGTCGTTGCCTATCTGTTTGCAATTCTGGC
CCATTCTTTCTTTAGCATCAAACCAACCTTGACCGTTGGCCTGTTTACCGGCACAATCACTAACACGCCAGCGCTGGCTG
CGGCCATCGAATATTTGAAATCGGTCTTGCCCGAGCAAGAATTAGCCGCTGTGGTCAATGATCCAGTTGTCGGTTATTCG
ATTGCCTACCCCATGGGTGTGGTGGCGATGATGTTGGCAATTGTTTTTGTCCAACGGTTGTGGCGCATCGATTATGTCAA
AGAATTAGCCTCACGCCATGATTTAGCTGGTAATCATCACGATATTACCAGCCGCACGGTTGAAATTACCAATCCTGAAG
TCACTAATCTATCAGTTCAGGCCTTGATTGCCAAATATCATTGGCCCATGGTTTTTGGGCGCTATCGCCGCGATGGCCAT
GTAGCGGTCACCACTGGCGCAACCCAATTTATGCTCGGCGATCATGTGAGCATTGTTGGGGCCAGCGAGGTGCTCGAAAA
AGCCCTAGCCGTGCTTGGCAAAGAAACCGACGATATTTCCAACGACCGCCGCGATCTTGATTATCGCCGCATGTTCGTCT
CTAACCCCAAAATTGTTGGAATTCGGCTGGAGCAGCTCAATTTGCCCCAAGTCTTGGGGGCAACCATTACCCGGGTGCGT
CGTGGCGATGTGGAAATGTTGCCAACCGCCGATACCCGCTTGGAGCTTGGCGATCGGGTGCGGGTGATTGCGCGGCGTGC
TGATATTCCTCAAGTGAGCCGCTTTTTTGGCGATTCGTATCGCGCCTTGAGCGAAGTTGATATTTTGACCTTCACTTTGG
GCTTAGTCTTAGGCTTGGTTGTGGGTTCGTTGGTGTTGCCATTACCAGGTGGCGTGAGCATCAAACTTGGCTTTGCTGGT
GGTCCATTGGTAGTTTCGTTGATTTTGGGCGCACTCGACCGCACTGGCCCATTGGTTTGGAACATGCCCTATAGCACCAA
CTTAACCCTGCGCCAAATTGGGATTGTGATGTTCTTGGCGGGGGTTGGCACCCGCGCAGGCTACGATTTCGTCAAATTCT
TATTCAGCAGTAATGGCTTGCTCTTGTTTGGAGTTGGCGCAGCAATTACCTTTAGCCTCGCCATGTTGATTTTGACGATT
GGCTACAAAGTGCTGAAAATCCCAATGGGCATTTTGACGGGGATGTTGGCGGGCTTTCAAACCCAGCCAGCCTTGCTCAG
TTTTGCGCTGCAACAAAGCAACAATGAGCTGCCAAATCAGGGCTATGCTGCGGTTTATCCATTAGCATTAATTATCAAAA
TCATTCTGGCCCAATTATTACTGATTCAACTTCTATGA

Upstream 100 bases:

>100_bases
TCGTAGCGAGGCTGCAACCGTGCAAAGTGGATGGCTCGGCTATGCTAAGATGGCATCGAGAGAAACAGCCTGATCGGCTG
TACGCTGCGAAAGGAACATT

Downstream 100 bases:

>100_bases
CATTGGTTGTCACAAACCAACGTATGCTTATGGCAGGCCGATTGAGGTCTGCCATTACTATTTGGGGTTTGTATGATCTT
TTCATGGATGAACCACTACG

Product: YidE/YbjL duplication

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MLDLLASNPLLLLFVVAAIGYPLGQLNLGGVRLGVAAVLFVGLAIGSLDERLKLPEVLYQFGLVMFVYTVGLSSGHQFFR
SWKSKGLRDNLFIGGMIVVAYLFAILAHSFFSIKPTLTVGLFTGTITNTPALAAAIEYLKSVLPEQELAAVVNDPVVGYS
IAYPMGVVAMMLAIVFVQRLWRIDYVKELASRHDLAGNHHDITSRTVEITNPEVTNLSVQALIAKYHWPMVFGRYRRDGH
VAVTTGATQFMLGDHVSIVGASEVLEKALAVLGKETDDISNDRRDLDYRRMFVSNPKIVGIRLEQLNLPQVLGATITRVR
RGDVEMLPTADTRLELGDRVRVIARRADIPQVSRFFGDSYRALSEVDILTFTLGLVLGLVVGSLVLPLPGGVSIKLGFAG
GPLVVSLILGALDRTGPLVWNMPYSTNLTLRQIGIVMFLAGVGTRAGYDFVKFLFSSNGLLLFGVGAAITFSLAMLILTI
GYKVLKIPMGILTGMLAGFQTQPALLSFALQQSNNELPNQGYAAVYPLALIIKIILAQLLLIQLL

Sequences:

>Translated_545_residues
MLDLLASNPLLLLFVVAAIGYPLGQLNLGGVRLGVAAVLFVGLAIGSLDERLKLPEVLYQFGLVMFVYTVGLSSGHQFFR
SWKSKGLRDNLFIGGMIVVAYLFAILAHSFFSIKPTLTVGLFTGTITNTPALAAAIEYLKSVLPEQELAAVVNDPVVGYS
IAYPMGVVAMMLAIVFVQRLWRIDYVKELASRHDLAGNHHDITSRTVEITNPEVTNLSVQALIAKYHWPMVFGRYRRDGH
VAVTTGATQFMLGDHVSIVGASEVLEKALAVLGKETDDISNDRRDLDYRRMFVSNPKIVGIRLEQLNLPQVLGATITRVR
RGDVEMLPTADTRLELGDRVRVIARRADIPQVSRFFGDSYRALSEVDILTFTLGLVLGLVVGSLVLPLPGGVSIKLGFAG
GPLVVSLILGALDRTGPLVWNMPYSTNLTLRQIGIVMFLAGVGTRAGYDFVKFLFSSNGLLLFGVGAAITFSLAMLILTI
GYKVLKIPMGILTGMLAGFQTQPALLSFALQQSNNELPNQGYAAVYPLALIIKIILAQLLLIQLL
>Mature_545_residues
MLDLLASNPLLLLFVVAAIGYPLGQLNLGGVRLGVAAVLFVGLAIGSLDERLKLPEVLYQFGLVMFVYTVGLSSGHQFFR
SWKSKGLRDNLFIGGMIVVAYLFAILAHSFFSIKPTLTVGLFTGTITNTPALAAAIEYLKSVLPEQELAAVVNDPVVGYS
IAYPMGVVAMMLAIVFVQRLWRIDYVKELASRHDLAGNHHDITSRTVEITNPEVTNLSVQALIAKYHWPMVFGRYRRDGH
VAVTTGATQFMLGDHVSIVGASEVLEKALAVLGKETDDISNDRRDLDYRRMFVSNPKIVGIRLEQLNLPQVLGATITRVR
RGDVEMLPTADTRLELGDRVRVIARRADIPQVSRFFGDSYRALSEVDILTFTLGLVLGLVVGSLVLPLPGGVSIKLGFAG
GPLVVSLILGALDRTGPLVWNMPYSTNLTLRQIGIVMFLAGVGTRAGYDFVKFLFSSNGLLLFGVGAAITFSLAMLILTI
GYKVLKIPMGILTGMLAGFQTQPALLSFALQQSNNELPNQGYAAVYPLALIIKIILAQLLLIQLL

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI87082315, Length=499, Percent_Identity=33.4669338677355, Blast_Score=264, Evalue=1e-71,
Organism=Escherichia coli, GI1787071, Length=550, Percent_Identity=25.8181818181818, Blast_Score=134, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006037
- InterPro:   IPR006512 [H]

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 59213; Mature: 59213

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLLASNPLLLLFVVAAIGYPLGQLNLGGVRLGVAAVLFVGLAIGSLDERLKLPEVLYQ
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHH
FGLVMFVYTVGLSSGHQFFRSWKSKGLRDNLFIGGMIVVAYLFAILAHSFFSIKPTLTVG
HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
LFTGTITNTPALAAAIEYLKSVLPEQELAAVVNDPVVGYSIAYPMGVVAMMLAIVFVQRL
EEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHH
WRIDYVKELASRHDLAGNHHDITSRTVEITNPEVTNLSVQALIAKYHWPMVFGRYRRDGH
HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
VAVTTGATQFMLGDHVSIVGASEVLEKALAVLGKETDDISNDRRDLDYRRMFVSNPKIVG
EEEECCCEEEHCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCHHCHHHHHHHHCCCCEEE
IRLEQLNLPQVLGATITRVRRGDVEMLPTADTRLELGDRVRVIARRADIPQVSRFFGDSY
EEECCCCCHHHHHHHHHHHHCCCCEECCCCCCHHCCCHHHHHHHHHCCCHHHHHHHCCHH
RALSEVDILTFTLGLVLGLVVGSLVLPLPGGVSIKLGFAGGPLVVSLILGALDRTGPLVW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEE
NMPYSTNLTLRQIGIVMFLAGVGTRAGYDFVKFLFSSNGLLLFGVGAAITFSLAMLILTI
ECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHH
GYKVLKIPMGILTGMLAGFQTQPALLSFALQQSNNELPNQGYAAVYPLALIIKIILAQLL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LIQLL
HHHCC
>Mature Secondary Structure
MLDLLASNPLLLLFVVAAIGYPLGQLNLGGVRLGVAAVLFVGLAIGSLDERLKLPEVLYQ
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHH
FGLVMFVYTVGLSSGHQFFRSWKSKGLRDNLFIGGMIVVAYLFAILAHSFFSIKPTLTVG
HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
LFTGTITNTPALAAAIEYLKSVLPEQELAAVVNDPVVGYSIAYPMGVVAMMLAIVFVQRL
EEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHH
WRIDYVKELASRHDLAGNHHDITSRTVEITNPEVTNLSVQALIAKYHWPMVFGRYRRDGH
HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
VAVTTGATQFMLGDHVSIVGASEVLEKALAVLGKETDDISNDRRDLDYRRMFVSNPKIVG
EEEECCCEEEHCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCHHCHHHHHHHHCCCCEEE
IRLEQLNLPQVLGATITRVRRGDVEMLPTADTRLELGDRVRVIARRADIPQVSRFFGDSY
EEECCCCCHHHHHHHHHHHHCCCCEECCCCCCHHCCCHHHHHHHHHCCCHHHHHHHCCHH
RALSEVDILTFTLGLVLGLVVGSLVLPLPGGVSIKLGFAGGPLVVSLILGALDRTGPLVW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEE
NMPYSTNLTLRQIGIVMFLAGVGTRAGYDFVKFLFSSNGLLLFGVGAAITFSLAMLILTI
ECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHH
GYKVLKIPMGILTGMLAGFQTQPALLSFALQQSNNELPNQGYAAVYPLALIIKIILAQLL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LIQLL
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA