| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898370
Identifier: 159898370
GI number: 159898370
Start: 2146569
End: 2147510
Strand: Reverse
Name: 159898370
Synonym: Haur_1846
Alternate gene names: NA
Gene position: 2147510-2146569 (Counterclockwise)
Preceding gene: 159898371
Following gene: 159898369
Centisome position: 33.84
GC content: 49.04
Gene sequence:
>942_bases ATGGTGTTTGATTGGATCGGCTATTTCGGTGACTCAACGATCGCAAACTGGGATGGGCAGGAACAATTTGAATCAATTGG ACATCCGGTGCGGCTGCATTTGGAATACGATTATGAAGCCAAATCAGCACCTCAACCATGGGCAGAGTATTTTAATGCGT GGCTCGCCACTGATGAACCAGCCCAAACCACGGGCTTGGTGATTGGCCGCTGGTGGCACGAGCAGGTTGATCCTGGCAAT ATTGATGCAGTTCTAGCCAGTATCAGCGCTGCCCGCGAACAGTTGCCCTTGCTCAAAGCCTTATTCGTCGGCGACTTTAC CTACGAAGAATGGGAAATTTCATGGATTACCCAAGGCAATTATGCTCCAGTTTTAGCCGCATTTCCGCAGCTTGAATATT TGGTGATTCGCGGTGGCTCGGAGTTAAGTTTTGGCGCGGTTCAGCATCAACAGCTCAAGGCCTTGATCATTCAGACTGGC GGTTTGGCAGCACAAGTTGTGCGTGATGTTGTTGCCGCCGATTTTCCAGCGCTTGAGCATTTGGAGCTATGGCTGGGCTG CGATTTCTATGGTGGCGATTCGACGCTTGCTGATTTACAGCCAATTTTGAAGGCTGAATGTTTTCCAAATTTAGCAGTTT TGGGTTTGCGCGATTGTGAATATGCCGATGATCTGGCTCAAGCACTGGTCGATGCCCCGATTCTTGAGCAGATCAGCTAT CTCGATCTTTCGCTGGGCAACTTGAGCGACGTGGGAGCTGAAGTCTTATTCGCCAGCGAAGCCATTCGCAGCCTTGATTT TCTTGATTTGCATCATCACTATATGAGCAACGAGCTGCTTGATTGTTGGGCGACAATTGGGTTAAATGTTGATGTCAGCG AGCAACAAATTCCCCAAGAACATGAGGGTGAGCAACATCGCTATGCTGCCGTTACTGAATAA
Upstream 100 bases:
>100_bases CCGAAGATGGTGAAGACGAAGAACCACGCGAGATCGCGATTCGTGAATACTTAGCCTAGTTTGTATATCAGTGGTTGTTG CCCAAAGAAAGAGGTAAGGT
Downstream 100 bases:
>100_bases ACTCAATCTATGTGACATTGTTTGTCACAAAATAGGCTATGCTATAGCTAGGCCGCAATCGGCCTGCAATTGCTATTTGT GAGGTATCCATGATTTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MVFDWIGYFGDSTIANWDGQEQFESIGHPVRLHLEYDYEAKSAPQPWAEYFNAWLATDEPAQTTGLVIGRWWHEQVDPGN IDAVLASISAAREQLPLLKALFVGDFTYEEWEISWITQGNYAPVLAAFPQLEYLVIRGGSELSFGAVQHQQLKALIIQTG GLAAQVVRDVVAADFPALEHLELWLGCDFYGGDSTLADLQPILKAECFPNLAVLGLRDCEYADDLAQALVDAPILEQISY LDLSLGNLSDVGAEVLFASEAIRSLDFLDLHHHYMSNELLDCWATIGLNVDVSEQQIPQEHEGEQHRYAAVTE
Sequences:
>Translated_313_residues MVFDWIGYFGDSTIANWDGQEQFESIGHPVRLHLEYDYEAKSAPQPWAEYFNAWLATDEPAQTTGLVIGRWWHEQVDPGN IDAVLASISAAREQLPLLKALFVGDFTYEEWEISWITQGNYAPVLAAFPQLEYLVIRGGSELSFGAVQHQQLKALIIQTG GLAAQVVRDVVAADFPALEHLELWLGCDFYGGDSTLADLQPILKAECFPNLAVLGLRDCEYADDLAQALVDAPILEQISY LDLSLGNLSDVGAEVLFASEAIRSLDFLDLHHHYMSNELLDCWATIGLNVDVSEQQIPQEHEGEQHRYAAVTE >Mature_313_residues MVFDWIGYFGDSTIANWDGQEQFESIGHPVRLHLEYDYEAKSAPQPWAEYFNAWLATDEPAQTTGLVIGRWWHEQVDPGN IDAVLASISAAREQLPLLKALFVGDFTYEEWEISWITQGNYAPVLAAFPQLEYLVIRGGSELSFGAVQHQQLKALIIQTG GLAAQVVRDVVAADFPALEHLELWLGCDFYGGDSTLADLQPILKAECFPNLAVLGLRDCEYADDLAQALVDAPILEQISY LDLSLGNLSDVGAEVLFASEAIRSLDFLDLHHHYMSNELLDCWATIGLNVDVSEQQIPQEHEGEQHRYAAVTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34882; Mature: 34882
Theoretical pI: Translated: 3.93; Mature: 3.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFDWIGYFGDSTIANWDGQEQFESIGHPVRLHLEYDYEAKSAPQPWAEYFNAWLATDEP CEEECEECCCCCCEECCCCHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCC AQTTGLVIGRWWHEQVDPGNIDAVLASISAAREQLPLLKALFVGDFTYEEWEISWITQGN CCHHCEEEEECHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC YAPVLAAFPQLEYLVIRGGSELSFGAVQHQQLKALIIQTGGLAAQVVRDVVAADFPALEH CCHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHCCCCHHH LELWLGCDFYGGDSTLADLQPILKAECFPNLAVLGLRDCEYADDLAQALVDAPILEQISY HHHEEECEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHH LDLSLGNLSDVGAEVLFASEAIRSLDFLDLHHHYMSNELLDCWATIGLNVDVSEQQIPQE HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHH HEGEQHRYAAVTE HCCCCCCEEECCC >Mature Secondary Structure MVFDWIGYFGDSTIANWDGQEQFESIGHPVRLHLEYDYEAKSAPQPWAEYFNAWLATDEP CEEECEECCCCCCEECCCCHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCC AQTTGLVIGRWWHEQVDPGNIDAVLASISAAREQLPLLKALFVGDFTYEEWEISWITQGN CCHHCEEEEECHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC YAPVLAAFPQLEYLVIRGGSELSFGAVQHQQLKALIIQTGGLAAQVVRDVVAADFPALEH CCHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHCCCCHHH LELWLGCDFYGGDSTLADLQPILKAECFPNLAVLGLRDCEYADDLAQALVDAPILEQISY HHHEEECEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHH LDLSLGNLSDVGAEVLFASEAIRSLDFLDLHHHYMSNELLDCWATIGLNVDVSEQQIPQE HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHH HEGEQHRYAAVTE HCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA