| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is fbpA [H]
Identifier: 159898246
GI number: 159898246
Start: 2004947
End: 2006086
Strand: Reverse
Name: fbpA [H]
Synonym: Haur_1722
Alternate gene names: 159898246
Gene position: 2006086-2004947 (Counterclockwise)
Preceding gene: 159898248
Following gene: 159898245
Centisome position: 31.61
GC content: 49.65
Gene sequence:
>1140_bases GTGAAACTTGTGCGTTCTTTGATGCTGTTGCTCTGTCTGAGCATTGTGATTGCAGCCTGTGGTGGGGAAGCAACTCCAAC GGCTGTAACAGCACCAACCACCGCTGCAGCAACCCCAACGACCGCTAGCGCAGCCGAAGCTACTGCTACCGTCGAAGTGA CTGCTATTGCTGAGGTTTCGCCAACCGTGCCAACCACCACCACCACTGAGCCAGCTGGCGGCAGTTTGGTTGTATATTCA GGGCGTTCAGAAAGCTTAGTTGCTCCCTTGTTGGAGCTTTTTACCCAAGAAACTGGGATTGCCGTCGAAGTACGCTATGG CGATACTGCCGAGATGGCCGCGCAAATTCTTGAAGAAGGCGATAATAGCCCAGCCGATGTCTTCTTCGGCCAAGATGCTG GTGCATTAGGCGCATTGAGCGATCGCTTTGTGCAACTTGATCGGTCATTGTTGAACTTGGTTGATCCACGTTTTGTTTCA AGCGAAGGCACATGGGTTGGTGCTTCGGGTCGCGCTCGGGTTTTGGTTTATAACACCGATGTCTTGACCAGCACCGATTT GCCAGCTTCGATTCTTGATTTGACCAAACCAGAGTGGAAAGGTCGGGTCGCTTGGGCTCCAACCAATGGTTCATTGCAAG CCTTTGTCACCGCATTGCGGGTAAGCCAAGGTGAAGATATGGCCAAACAATGGCTCGAAGGCATGATCGCCAACGACGTT AAAGTCTATGAATCGAACTCAGCGATTGTCAAAGCCGTTGCGAGTGGCGAAGTTGATACCGGCTTGGTCAATCACTACTA CTTGTTTGCCTTGAAAAAAGAGCAACCAGATGCCAAGGCTGCTAACCACTACTTCGGCAATGGCGATATTGGCTCGTTGG TGAATGTTGCTGGCGTGGGTGTGCTCAAAACTGCCAAGAATCCTGAAGCCGCTCAAACCTTTGCTAATTATTTGTTGAGC GACGGTGCCCAACTCTATTTCGCCGATAAAACCAATGAATATCCCTTGGTAGCTGGAATTATTACCAACCCAGCAATCAA GCCATTGGGCGAAATTATTACCCCAAACATCGATTTGAGCAATTTGAAAGATTTGCAAGGAACCTTAGAATTGTTGCAAG ATGTTGGGGCGATCCAATAA
Upstream 100 bases:
>100_bases TGATAAAAACTGTTTTTTCAGAAAAAATAGTTTTTACCATTGTGATAAATACTTGCTAAAGCTTGCTCAATGATCGAGCA AGTTGGCTAAGGAGTACTTC
Downstream 100 bases:
>100_bases GCACGTCATTGCAAGCTTGGCTTGCTAGATTGAGCTATGGTTTTTAAACATTTGCGCTTTCGATCTGGCCGTTGGTCAGC ACTGTTCTTAACGATCAGTG
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: Iron(III)-binding periplasmic protein [H]
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MKLVRSLMLLLCLSIVIAACGGEATPTAVTAPTTAAATPTTASAAEATATVEVTAIAEVSPTVPTTTTTEPAGGSLVVYS GRSESLVAPLLELFTQETGIAVEVRYGDTAEMAAQILEEGDNSPADVFFGQDAGALGALSDRFVQLDRSLLNLVDPRFVS SEGTWVGASGRARVLVYNTDVLTSTDLPASILDLTKPEWKGRVAWAPTNGSLQAFVTALRVSQGEDMAKQWLEGMIANDV KVYESNSAIVKAVASGEVDTGLVNHYYLFALKKEQPDAKAANHYFGNGDIGSLVNVAGVGVLKTAKNPEAAQTFANYLLS DGAQLYFADKTNEYPLVAGIITNPAIKPLGEIITPNIDLSNLKDLQGTLELLQDVGAIQ
Sequences:
>Translated_379_residues MKLVRSLMLLLCLSIVIAACGGEATPTAVTAPTTAAATPTTASAAEATATVEVTAIAEVSPTVPTTTTTEPAGGSLVVYS GRSESLVAPLLELFTQETGIAVEVRYGDTAEMAAQILEEGDNSPADVFFGQDAGALGALSDRFVQLDRSLLNLVDPRFVS SEGTWVGASGRARVLVYNTDVLTSTDLPASILDLTKPEWKGRVAWAPTNGSLQAFVTALRVSQGEDMAKQWLEGMIANDV KVYESNSAIVKAVASGEVDTGLVNHYYLFALKKEQPDAKAANHYFGNGDIGSLVNVAGVGVLKTAKNPEAAQTFANYLLS DGAQLYFADKTNEYPLVAGIITNPAIKPLGEIITPNIDLSNLKDLQGTLELLQDVGAIQ >Mature_379_residues MKLVRSLMLLLCLSIVIAACGGEATPTAVTAPTTAAATPTTASAAEATATVEVTAIAEVSPTVPTTTTTEPAGGSLVVYS GRSESLVAPLLELFTQETGIAVEVRYGDTAEMAAQILEEGDNSPADVFFGQDAGALGALSDRFVQLDRSLLNLVDPRFVS SEGTWVGASGRARVLVYNTDVLTSTDLPASILDLTKPEWKGRVAWAPTNGSLQAFVTALRVSQGEDMAKQWLEGMIANDV KVYESNSAIVKAVASGEVDTGLVNHYYLFALKKEQPDAKAANHYFGNGDIGSLVNVAGVGVLKTAKNPEAAQTFANYLLS DGAQLYFADKTNEYPLVAGIITNPAIKPLGEIITPNIDLSNLKDLQGTLELLQDVGAIQ
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. This protein specifically binds Fe(3+) and is involved in its transmembrane transport [H]
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR006061 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 39767; Mature: 39767
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVRSLMLLLCLSIVIAACGGEATPTAVTAPTTAAATPTTASAAEATATVEVTAIAEVS CHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEEEEECC PTVPTTTTTEPAGGSLVVYSGRSESLVAPLLELFTQETGIAVEVRYGDTAEMAAQILEEG CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCC DNSPADVFFGQDAGALGALSDRFVQLDRSLLNLVDPRFVSSEGTWVGASGRARVLVYNTD CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEECCCCEEEEEEECC VLTSTDLPASILDLTKPEWKGRVAWAPTNGSLQAFVTALRVSQGEDMAKQWLEGMIANDV EEECCCCCHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCE KVYESNSAIVKAVASGEVDTGLVNHYYLFALKKEQPDAKAANHYFGNGDIGSLVNVAGVG EEEECCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCHHHCCCCCCCCHHHHHHHHCCE VLKTAKNPEAAQTFANYLLSDGAQLYFADKTNEYPLVAGIITNPAIKPLGEIITPNIDLS EEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHCCCCCHH NLKDLQGTLELLQDVGAIQ HHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKLVRSLMLLLCLSIVIAACGGEATPTAVTAPTTAAATPTTASAAEATATVEVTAIAEVS CHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEEEEECC PTVPTTTTTEPAGGSLVVYSGRSESLVAPLLELFTQETGIAVEVRYGDTAEMAAQILEEG CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCC DNSPADVFFGQDAGALGALSDRFVQLDRSLLNLVDPRFVSSEGTWVGASGRARVLVYNTD CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEECCCCEEEEEEECC VLTSTDLPASILDLTKPEWKGRVAWAPTNGSLQAFVTALRVSQGEDMAKQWLEGMIANDV EEECCCCCHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCE KVYESNSAIVKAVASGEVDTGLVNHYYLFALKKEQPDAKAANHYFGNGDIGSLVNVAGVG EEEECCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCHHHCCCCCCCCHHHHHHHHCCE VLKTAKNPEAAQTFANYLLSDGAQLYFADKTNEYPLVAGIITNPAIKPLGEIITPNIDLS EEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHCCCCCHH NLKDLQGTLELLQDVGAIQ HHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2404942 [H]