| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yaeQ [H]
Identifier: 159898149
GI number: 159898149
Start: 1884192
End: 1884734
Strand: Reverse
Name: yaeQ [H]
Synonym: Haur_1625
Alternate gene names: 159898149
Gene position: 1884734-1884192 (Counterclockwise)
Preceding gene: 159898150
Following gene: 159898148
Centisome position: 29.7
GC content: 48.99
Gene sequence:
>543_bases ATGGCGCTTAGTGCAACGATTTATACAATTAATGTTGATTTAGCCAATGTTGATCGCAATGTTTATGAGCAATTAGAACT GCGCGTAGCCCGCCAACCATCTGAATCAGCCGAATATATGTTGATGCGAATTTTGGCTTATTGCTTAGAATACAGCGATG GCATCGCCTTCACTCAGGGCGTGGCGGCTGGCGATGAACCAGCGGTTTGGATTCGCGATTTGACCGGGCAGGTGACTGGC TGGTTTGAGGTTGGTGCGCCTGATGCCGAGCGTTTACATCGTGGCAGCAAACGAGCTGGACGGGCGGCGGTATACACCCA TCGCGATGTAGCCCAAGTGCTGGGTAATTTCAGTGGCAAAACCATTTTTCAAGCCGAGCAAATTCCAGTCTATGCCTTTG ATCGGCGGTTTATTGAAAACGTTGCCAACCTGATCGAACGGCGCTGTAATTTGGGCATTTCGCTGACCGAACAACAACTC TATATCGAAATAGCTGGACAAAGCCTGAACAGCCACATCGAAGAACATCGGATTAGCAACTAG
Upstream 100 bases:
>100_bases GTGTTGGAAATACCATCGTGGCTTCGCTTGCACAAGCAGGACATGGAGTCAATGGTAATGACAAGCTATCTATCAAAAAA TCAATTAATGAGGAGCATTC
Downstream 100 bases:
>100_bases GCTCACTAATTAGAAGTGTAGGGCTTGAAGCAGCCAACAACCTTTGTTATACTCGGCAGAGGCTTAGCATTCGCCCAAGT TGCTGGCTCGCTGTCGGCTT
Product: YaeQ family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MALSATIYTINVDLANVDRNVYEQLELRVARQPSESAEYMLMRILAYCLEYSDGIAFTQGVAAGDEPAVWIRDLTGQVTG WFEVGAPDAERLHRGSKRAGRAAVYTHRDVAQVLGNFSGKTIFQAEQIPVYAFDRRFIENVANLIERRCNLGISLTEQQL YIEIAGQSLNSHIEEHRISN
Sequences:
>Translated_180_residues MALSATIYTINVDLANVDRNVYEQLELRVARQPSESAEYMLMRILAYCLEYSDGIAFTQGVAAGDEPAVWIRDLTGQVTG WFEVGAPDAERLHRGSKRAGRAAVYTHRDVAQVLGNFSGKTIFQAEQIPVYAFDRRFIENVANLIERRCNLGISLTEQQL YIEIAGQSLNSHIEEHRISN >Mature_179_residues ALSATIYTINVDLANVDRNVYEQLELRVARQPSESAEYMLMRILAYCLEYSDGIAFTQGVAAGDEPAVWIRDLTGQVTGW FEVGAPDAERLHRGSKRAGRAAVYTHRDVAQVLGNFSGKTIFQAEQIPVYAFDRRFIENVANLIERRCNLGISLTEQQLY IEIAGQSLNSHIEEHRISN
Specific function: Unknown
COG id: COG4681
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786388, Length=164, Percent_Identity=31.7073170731707, Blast_Score=97, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009822 [H]
Pfam domain/function: PF07152 YaeQ [H]
EC number: NA
Molecular weight: Translated: 20237; Mature: 20106
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSATIYTINVDLANVDRNVYEQLELRVARQPSESAEYMLMRILAYCLEYSDGIAFTQG CCCEEEEEEEEEEHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEECC VAAGDEPAVWIRDLTGQVTGWFEVGAPDAERLHRGSKRAGRAAVYTHRDVAQVLGNFSGK CCCCCCCCEEEEECCCCEEEEEEECCCCHHHHHCCCCCCCCEEEEEHHHHHHHHHCCCCC TIFQAEQIPVYAFDRRFIENVANLIERRCNLGISLTEQQLYIEIAGQSLNSHIEEHRISN EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEECCHHHHHHHHHCCCC >Mature Secondary Structure ALSATIYTINVDLANVDRNVYEQLELRVARQPSESAEYMLMRILAYCLEYSDGIAFTQG CCEEEEEEEEEEHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEECC VAAGDEPAVWIRDLTGQVTGWFEVGAPDAERLHRGSKRAGRAAVYTHRDVAQVLGNFSGK CCCCCCCCEEEEECCCCEEEEEEECCCCHHHHHCCCCCCCCEEEEEHHHHHHHHHCCCCC TIFQAEQIPVYAFDRRFIENVANLIERRCNLGISLTEQQLYIEIAGQSLNSHIEEHRISN EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEECCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]