| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898142
Identifier: 159898142
GI number: 159898142
Start: 1877899
End: 1878714
Strand: Reverse
Name: 159898142
Synonym: Haur_1618
Alternate gene names: NA
Gene position: 1878714-1877899 (Counterclockwise)
Preceding gene: 159898143
Following gene: 159898132
Centisome position: 29.6
GC content: 51.96
Gene sequence:
>816_bases ATGAAACGCGAAGAACGTAAAATTATTGCCCAACGCACCCTCGATGCACTAGCTGAGGGTGGTTATGTTAACGCAGCAGG TCAAGCGGTCGATATTCGGGCTGCGCAACATGCCGCCGAACAAGCCAGCACGATCATCTGGCCTGATACAGCCTTGGCGG AGGCTCGCAATGCCAGCCAACAACCAAGCATTAACGTCTATGCAGCCACAACTTTAGCCGCAGCCCAAAGCCATGCCCAA ACTGGCCAACGGGTGGCAATCTTAAATTTTGCTTCGGCCAAAAATCCAGGTGGTGGTTTTCTAGGTGGTAGCCAAGCCCA AGAGGAAAGTATCGCCCGTTCGTCGGGCTTGTATCCCTGTTTAACTCGTTGTAGCGAGTTTTATCGCTTTCACAAGCAGC AAAACGATTTATGCTACTCCGACGCGCTGATTTGGTCGCCCCAAGTGCCAGTGCTGTGCGACGATGCAGGTAATTGGCTA GAGCAGCCGTATTTGGTCGATGTGGTAACGATGGCGGCGGTCAATGCGGGAGCGATTCGCCAAAATCATACTGGCCAAAG TAGCGAGGTTGAACCAGCCATGCGCCAGCGCATGCAACGGCTGCTAGCATTTTGTGCCAGCCAACCAATCGAACGCCTCA TTTTGGGTGCTTGGGGCTGTGGAGTGTTCGGCAATGATCCAGCAATGATTGCCAAGTTGTTCAAAGCGATTATTGGGCAA CAAGCCTGGCCGTTTGCCCAAATTGATTTTGCAATTTATGATCCAAGCCCACGTCGAGCCACCGTCGCACTATTTGCCGC TATCTTTAACGATTAA
Upstream 100 bases:
>100_bases TTCACGATGTCAAAAGCAACGATTTTGCCACCCGCCAAATCTATGAGCCGCTTGGCTATCGTCAAGTTGGCAGTTTTTGG GAAGGAACCGCACGGTTAAG
Downstream 100 bases:
>100_bases TTATCGCTCTTTTACCGATTTTCGGCGGTGTACTGAAAAACATAAAAGCCCCTCGCCCACCGCAGTGGACGAGGGGTTGG AGTGAGGGGTAATTAATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MKREERKIIAQRTLDALAEGGYVNAAGQAVDIRAAQHAAEQASTIIWPDTALAEARNASQQPSINVYAATTLAAAQSHAQ TGQRVAILNFASAKNPGGGFLGGSQAQEESIARSSGLYPCLTRCSEFYRFHKQQNDLCYSDALIWSPQVPVLCDDAGNWL EQPYLVDVVTMAAVNAGAIRQNHTGQSSEVEPAMRQRMQRLLAFCASQPIERLILGAWGCGVFGNDPAMIAKLFKAIIGQ QAWPFAQIDFAIYDPSPRRATVALFAAIFND
Sequences:
>Translated_271_residues MKREERKIIAQRTLDALAEGGYVNAAGQAVDIRAAQHAAEQASTIIWPDTALAEARNASQQPSINVYAATTLAAAQSHAQ TGQRVAILNFASAKNPGGGFLGGSQAQEESIARSSGLYPCLTRCSEFYRFHKQQNDLCYSDALIWSPQVPVLCDDAGNWL EQPYLVDVVTMAAVNAGAIRQNHTGQSSEVEPAMRQRMQRLLAFCASQPIERLILGAWGCGVFGNDPAMIAKLFKAIIGQ QAWPFAQIDFAIYDPSPRRATVALFAAIFND >Mature_271_residues MKREERKIIAQRTLDALAEGGYVNAAGQAVDIRAAQHAAEQASTIIWPDTALAEARNASQQPSINVYAATTLAAAQSHAQ TGQRVAILNFASAKNPGGGFLGGSQAQEESIARSSGLYPCLTRCSEFYRFHKQQNDLCYSDALIWSPQVPVLCDDAGNWL EQPYLVDVVTMAAVNAGAIRQNHTGQSSEVEPAMRQRMQRLLAFCASQPIERLILGAWGCGVFGNDPAMIAKLFKAIIGQ QAWPFAQIDFAIYDPSPRRATVALFAAIFND
Specific function: Unknown
COG id: COG4295
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29373; Mature: 29373
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKREERKIIAQRTLDALAEGGYVNAAGQAVDIRAAQHAAEQASTIIWPDTALAEARNASQ CCHHHHHHHHHHHHHHHHCCCEEECCCCEEEHHHHHHHHHHCCEEECCCHHHHHHHCCCC QPSINVYAATTLAAAQSHAQTGQRVAILNFASAKNPGGGFLGGSQAQEESIARSSGLYPC CCCEEEEEHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHH LTRCSEFYRFHKQQNDLCYSDALIWSPQVPVLCDDAGNWLEQPYLVDVVTMAAVNAGAIR HHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCCCHHCCCHHHHHHHHHHHHHCHHC QNHTGQSSEVEPAMRQRMQRLLAFCASQPIERLILGAWGCGVFGNDPAMIAKLFKAIIGQ CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC QAWPFAQIDFAIYDPSPRRATVALFAAIFND CCCCCEEEEEEEECCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKREERKIIAQRTLDALAEGGYVNAAGQAVDIRAAQHAAEQASTIIWPDTALAEARNASQ CCHHHHHHHHHHHHHHHHCCCEEECCCCEEEHHHHHHHHHHCCEEECCCHHHHHHHCCCC QPSINVYAATTLAAAQSHAQTGQRVAILNFASAKNPGGGFLGGSQAQEESIARSSGLYPC CCCEEEEEHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHH LTRCSEFYRFHKQQNDLCYSDALIWSPQVPVLCDDAGNWLEQPYLVDVVTMAAVNAGAIR HHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCCCHHCCCHHHHHHHHHHHHHCHHC QNHTGQSSEVEPAMRQRMQRLLAFCASQPIERLILGAWGCGVFGNDPAMIAKLFKAIIGQ CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC QAWPFAQIDFAIYDPSPRRATVALFAAIFND CCCCCEEEEEEEECCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA