| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898090
Identifier: 159898090
GI number: 159898090
Start: 1817447
End: 1818136
Strand: Reverse
Name: 159898090
Synonym: Haur_1566
Alternate gene names: NA
Gene position: 1818136-1817447 (Counterclockwise)
Preceding gene: 159898113
Following gene: 159898089
Centisome position: 28.65
GC content: 46.81
Gene sequence:
>690_bases ATGAGAAGTTTTATATTGAAGCTGCTTGGAAAGAAAAATAACCCAAGCAGTCCTGTTCTGCCCAAACCAATTCCAATCCC GATGCCGCCAACTCCAGCAGTCCTCGGCAAATGGCCAGTAACTTCTAATGGTGTTTTGCCAACTGATCATCGCTTTCGTT GGGATGAAACGTGGCGCTGGATTAATAGCTTGCCCAAACCGCGCCAACATATGCTCATGCAGTTAGGTGTAGGCCTGATT TTCCCAAGCTTTATGTTGCGACATGTTGCCTATACCACTCATTGGTATGAATCTCCGATGGATTGGCTGATTTATGGGCG GGGGTTGTACGCTTTTTTTCAGCAGCCTGATCGTTTGCGCAGCTATCTGTATGGAGCCACTATCAGCCCAGTTGAGCGTA CCCAACTTATCGAGTTACGTTCCAGCAAGCTGTTTATTGGCCAACAAGCTGCTTGGAAGTACATCGATTCGCTCGAATGC CCAATTACCCGTGAATTGTTAGCTGCAACTCTAAGCTATGCCCTGCCATTCCTGCGCGATGACCCAGATTATCAAACTCG CTATCCAACCAACCCGCTTGATCTTTACTTATTCGTGGTCGCAGCTAGCGATGTGTTGTGGCGCATCGACAAAATTCAGC AGATTATCGATGGCGAAGTCAATTCGCTTGAAGAGTTTGATTTTTTCTAA
Upstream 100 bases:
>100_bases TGATCTTGCATTATTTAAGCTACACCTTTGGACTAGCACACCAAAACCTACATTATGCTATCCTCAAACCCTAAGTCGTT TAAAGTTGGGAGTTGCATTA
Downstream 100 bases:
>100_bases ATTCTTAACCAACGCTTAAAACCACCTCGATAAACTCGAACAAGCGTGCTTTGACAAGAGCCTAAACCATCGGCTAAACT GCACCAACGAGCTACAACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MRSFILKLLGKKNNPSSPVLPKPIPIPMPPTPAVLGKWPVTSNGVLPTDHRFRWDETWRWINSLPKPRQHMLMQLGVGLI FPSFMLRHVAYTTHWYESPMDWLIYGRGLYAFFQQPDRLRSYLYGATISPVERTQLIELRSSKLFIGQQAAWKYIDSLEC PITRELLAATLSYALPFLRDDPDYQTRYPTNPLDLYLFVVAASDVLWRIDKIQQIIDGEVNSLEEFDFF
Sequences:
>Translated_229_residues MRSFILKLLGKKNNPSSPVLPKPIPIPMPPTPAVLGKWPVTSNGVLPTDHRFRWDETWRWINSLPKPRQHMLMQLGVGLI FPSFMLRHVAYTTHWYESPMDWLIYGRGLYAFFQQPDRLRSYLYGATISPVERTQLIELRSSKLFIGQQAAWKYIDSLEC PITRELLAATLSYALPFLRDDPDYQTRYPTNPLDLYLFVVAASDVLWRIDKIQQIIDGEVNSLEEFDFF >Mature_229_residues MRSFILKLLGKKNNPSSPVLPKPIPIPMPPTPAVLGKWPVTSNGVLPTDHRFRWDETWRWINSLPKPRQHMLMQLGVGLI FPSFMLRHVAYTTHWYESPMDWLIYGRGLYAFFQQPDRLRSYLYGATISPVERTQLIELRSSKLFIGQQAAWKYIDSLEC PITRELLAATLSYALPFLRDDPDYQTRYPTNPLDLYLFVVAASDVLWRIDKIQQIIDGEVNSLEEFDFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26706; Mature: 26706
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSFILKLLGKKNNPSSPVLPKPIPIPMPPTPAVLGKWPVTSNGVLPTDHRFRWDETWRW CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCHHHHHHH INSLPKPRQHMLMQLGVGLIFPSFMLRHVAYTTHWYESPMDWLIYGRGLYAFFQQPDRLR HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHCCCHHHHHHCCHHHHH SYLYGATISPVERTQLIELRSSKLFIGQQAAWKYIDSLECPITRELLAATLSYALPFLRD HHHHCCCCCCHHHHHHHHHHCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC DPDYQTRYPTNPLDLYLFVVAASDVLWRIDKIQQIIDGEVNSLEEFDFF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure MRSFILKLLGKKNNPSSPVLPKPIPIPMPPTPAVLGKWPVTSNGVLPTDHRFRWDETWRW CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCHHHHHHH INSLPKPRQHMLMQLGVGLIFPSFMLRHVAYTTHWYESPMDWLIYGRGLYAFFQQPDRLR HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHCCCHHHHHHCCHHHHH SYLYGATISPVERTQLIELRSSKLFIGQQAAWKYIDSLECPITRELLAATLSYALPFLRD HHHHCCCCCCHHHHHHHHHHCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC DPDYQTRYPTNPLDLYLFVVAASDVLWRIDKIQQIIDGEVNSLEEFDFF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA