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The map label for this gene is yhdE [C]

Identifier: 159898088

GI number: 159898088

Start: 1815444

End: 1816133

Strand: Reverse

Name: yhdE [C]

Synonym: Haur_1564

Alternate gene names: 159898088

Gene position: 1816133-1815444 (Counterclockwise)

Preceding gene: 159898089

Following gene: 159898087

Centisome position: 28.62

GC content: 52.75

Gene sequence:

>690_bases
GTGGATAGCTTAATTCTGGCCTCGGCCTCACCCCGACGGCATGATTTGTTAAGTAGTTTGGGGCTGTCGTTTATAATTGA
GGCTAATGATGGGGAAGAGCGCCAAGATCAAGTACCCTCAGCGATTGTGGAGTTGCTCCCAGCTTTCGATTTAGGCCTTG
CCAATCACCCAACTTTATTAGCGTGGCGTAAAGCGCAAGCAGCCCGCGAAACAGGTAGTTCAGCAGCGATTTTGGCCGCT
GATACGATTGTGGTGATTGATTCGTTGATCTTGGGCAAGCCACGTGATCCGGCTCATGCCTATGAATTGCTGCGCCGCCT
CGCCGGACGTTGGCATACTGTTTATACCGGAGTTGTGGTGCTGCCCGCCGCCTCAGACCAACCGTTATGCGAGTTGGCTG
CTGCCCAAGTGCGTTTAAGTCCGCTCAGCGATGCTGAAATTTGGGACTACATTGCAACTGGCGAGCCAATGGATAAAGCC
GGAGCCTATGGCGTACAAGGCATCGGCGGACGCTTGGTCGAAGAGGTTCAAGGCAGTTTTACAACCGTTGTTGGGCTACC
GCTTCCAACGACTGCTAGCTTATTGACCCAAGCAGGAATCTATGTTCCCTACTCGGTCGAGCAAGCTTGGCAGCGCTGGC
GTGCTACATTAGCAAAGGAACCACTATGTATGCAACAGTCAAAGTGCTGA

Upstream 100 bases:

>100_bases
TGCTTGAGGATGATGACGAAGCCTAATTGCTACTTGCAGCTTTGCCTGTTTGCGTTATGATGAACAACAATTGAGTTTGG
CTTGTGGAGTACCATGCAGC

Downstream 100 bases:

>100_bases
TGGTCGATGATCACCCATTGTTTCGGCAAGGGGTTCGTTGGGCGCTTTCGAGCGAACGCGATATCAAGATCATTGGAGAA
GGTTCTAGTGCCGAAGAAGG

Product: maf protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MDSLILASASPRRHDLLSSLGLSFIIEANDGEERQDQVPSAIVELLPAFDLGLANHPTLLAWRKAQAARETGSSAAILAA
DTIVVIDSLILGKPRDPAHAYELLRRLAGRWHTVYTGVVVLPAASDQPLCELAAAQVRLSPLSDAEIWDYIATGEPMDKA
GAYGVQGIGGRLVEEVQGSFTTVVGLPLPTTASLLTQAGIYVPYSVEQAWQRWRATLAKEPLCMQQSKC

Sequences:

>Translated_229_residues
MDSLILASASPRRHDLLSSLGLSFIIEANDGEERQDQVPSAIVELLPAFDLGLANHPTLLAWRKAQAARETGSSAAILAA
DTIVVIDSLILGKPRDPAHAYELLRRLAGRWHTVYTGVVVLPAASDQPLCELAAAQVRLSPLSDAEIWDYIATGEPMDKA
GAYGVQGIGGRLVEEVQGSFTTVVGLPLPTTASLLTQAGIYVPYSVEQAWQRWRATLAKEPLCMQQSKC
>Mature_229_residues
MDSLILASASPRRHDLLSSLGLSFIIEANDGEERQDQVPSAIVELLPAFDLGLANHPTLLAWRKAQAARETGSSAAILAA
DTIVVIDSLILGKPRDPAHAYELLRRLAGRWHTVYTGVVVLPAASDQPLCELAAAQVRLSPLSDAEIWDYIATGEPMDKA
GAYGVQGIGGRLVEEVQGSFTTVVGLPLPTTASLLTQAGIYVPYSVEQAWQRWRATLAKEPLCMQQSKC

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family [H]

Homologues:

Organism=Homo sapiens, GI117553627, Length=207, Percent_Identity=38.6473429951691, Blast_Score=133, Evalue=2e-31,
Organism=Homo sapiens, GI291045183, Length=207, Percent_Identity=38.1642512077295, Blast_Score=124, Evalue=8e-29,
Organism=Homo sapiens, GI291045181, Length=133, Percent_Identity=44.3609022556391, Blast_Score=116, Evalue=2e-26,
Organism=Homo sapiens, GI310133124, Length=133, Percent_Identity=44.3609022556391, Blast_Score=114, Evalue=5e-26,
Organism=Escherichia coli, GI1789646, Length=199, Percent_Identity=41.2060301507538, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI87081830, Length=202, Percent_Identity=32.6732673267327, Blast_Score=89, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI193202443, Length=186, Percent_Identity=32.258064516129, Blast_Score=97, Evalue=5e-21,
Organism=Drosophila melanogaster, GI78706856, Length=192, Percent_Identity=36.9791666666667, Blast_Score=107, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003697 [H]

Pfam domain/function: PF02545 Maf [H]

EC number: NA

Molecular weight: Translated: 24626; Mature: 24626

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLILASASPRRHDLLSSLGLSFIIEANDGEERQDQVPSAIVELLPAFDLGLANHPTLL
CCCEEECCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
AWRKAQAARETGSSAAILAADTIVVIDSLILGKPRDPAHAYELLRRLAGRWHTVYTGVVV
HHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEEEE
LPAASDQPLCELAAAQVRLSPLSDAEIWDYIATGEPMDKAGAYGVQGIGGRLVEEVQGSF
EECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHCCCCCCCCCHHHHHHHHCCCE
TTVVGLPLPTTASLLTQAGIYVPYSVEQAWQRWRATLAKEPLCMQQSKC
EEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCC
>Mature Secondary Structure
MDSLILASASPRRHDLLSSLGLSFIIEANDGEERQDQVPSAIVELLPAFDLGLANHPTLL
CCCEEECCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
AWRKAQAARETGSSAAILAADTIVVIDSLILGKPRDPAHAYELLRRLAGRWHTVYTGVVV
HHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEEEE
LPAASDQPLCELAAAQVRLSPLSDAEIWDYIATGEPMDKAGAYGVQGIGGRLVEEVQGSF
EECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHCCCCCCCCCHHHHHHHHCCCE
TTVVGLPLPTTASLLTQAGIYVPYSVEQAWQRWRATLAKEPLCMQQSKC
EEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA