The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159898069

Identifier: 159898069

GI number: 159898069

Start: 1799276

End: 1799767

Strand: Reverse

Name: 159898069

Synonym: Haur_1545

Alternate gene names: NA

Gene position: 1799767-1799276 (Counterclockwise)

Preceding gene: 159898083

Following gene: 159898061

Centisome position: 28.36

GC content: 47.15

Gene sequence:

>492_bases
ATGAATATTACCGCATTTCGCCACTTCTACGATTATCATTTTGCCCAAAATCGCCAGCTTTTAGATGATTATGTCGCGCA
ATTATCCGCTGCGCAATTTGTCCAAGCCGTCGATTATTCGCTTGGATCAGTGCGTAACCAACTGGTGCATCTGATGAGTG
TTGATGAAACCTGGTTTAGTGGCCTGCGTGGCGGGGAATTTCCAGAGCCGCTCGATCCCAACAATTTCCCTGATCTGGCA
ACGCTACGGGCTTATTGGGCAAACGTCGAGGCAATGATGCGCGACTATTTGGCCAATTTGCAGGATGCCGATTTGCAAAC
CAAGCCGCTTGATGGCGAGGATGAAAATTTAATTGTTTGGCAGGTATTGCTGCAAGTGGTCAATCATGGCACCGACCATC
GCGCTCAGATCTTGCGCTTGTGCCATGATTTTGGCCTAAAAACCAGCTCACAAGATTATATTTTTTATGTCTATGAGCAT
CCCGAAGCCTAA

Upstream 100 bases:

>100_bases
TATTTTAAATAAAACATATGTGCTATTATAAATGTACTATTTGACCATCATGTCCAGGATAGTCCAAAGGAGCAGTTTGA
TTAAGTAATAGGAGATTTAG

Downstream 100 bases:

>100_bases
AAAAGCAGCGACCCACACTGATTTGAGTGGGTCGCCAACAGAATTAAGCTAATTGAGGAGTTGGGCGGCGGGGGCGATTA
TTGTAGTAGAGCACAAACCA

Product: DinB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MNITAFRHFYDYHFAQNRQLLDDYVAQLSAAQFVQAVDYSLGSVRNQLVHLMSVDETWFSGLRGGEFPEPLDPNNFPDLA
TLRAYWANVEAMMRDYLANLQDADLQTKPLDGEDENLIVWQVLLQVVNHGTDHRAQILRLCHDFGLKTSSQDYIFYVYEH
PEA

Sequences:

>Translated_163_residues
MNITAFRHFYDYHFAQNRQLLDDYVAQLSAAQFVQAVDYSLGSVRNQLVHLMSVDETWFSGLRGGEFPEPLDPNNFPDLA
TLRAYWANVEAMMRDYLANLQDADLQTKPLDGEDENLIVWQVLLQVVNHGTDHRAQILRLCHDFGLKTSSQDYIFYVYEH
PEA
>Mature_163_residues
MNITAFRHFYDYHFAQNRQLLDDYVAQLSAAQFVQAVDYSLGSVRNQLVHLMSVDETWFSGLRGGEFPEPLDPNNFPDLA
TLRAYWANVEAMMRDYLANLQDADLQTKPLDGEDENLIVWQVLLQVVNHGTDHRAQILRLCHDFGLKTSSQDYIFYVYEH
PEA

Specific function: Unknown

COG id: COG2318

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18886; Mature: 18886

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITAFRHFYDYHFAQNRQLLDDYVAQLSAAQFVQAVDYSLGSVRNQLVHLMSVDETWFS
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLRGGEFPEPLDPNNFPDLATLRAYWANVEAMMRDYLANLQDADLQTKPLDGEDENLIVW
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
QVLLQVVNHGTDHRAQILRLCHDFGLKTSSQDYIFYVYEHPEA
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure
MNITAFRHFYDYHFAQNRQLLDDYVAQLSAAQFVQAVDYSLGSVRNQLVHLMSVDETWFS
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLRGGEFPEPLDPNNFPDLATLRAYWANVEAMMRDYLANLQDADLQTKPLDGEDENLIVW
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
QVLLQVVNHGTDHRAQILRLCHDFGLKTSSQDYIFYVYEHPEA
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA