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The map label for this gene is ytfH [C]

Identifier: 159898044

GI number: 159898044

Start: 1772753

End: 1773409

Strand: Reverse

Name: ytfH [C]

Synonym: Haur_1519

Alternate gene names: 159898044

Gene position: 1773409-1772753 (Counterclockwise)

Preceding gene: 159898047

Following gene: 159898043

Centisome position: 27.94

GC content: 50.08

Gene sequence:

>657_bases
ATGAATAATCGCAGCTACAACCAATATTGCGGGCTAGCCTATGCCCTTGAACTGCTCGGCGAACGTTGGACGATTCTGCT
CATTCGTGAGTTGGTGGCTGGGCCGCGCCGCTTTAAAGATTTACTGAACGGCTTGCCTGGCATTAGCACCAATCTCTTGA
CTGAACGGCTTAAACATCTTGAACTGCATGGCATGATCGTGCGCCAAGTCTTGGCTCCTCCAGCAGGATCAACGGTCTAT
GGCCTAACCGATTTAGGCCGTGGGCTTGAGCCAACGTTGATCGAGCTGGGCAAATGGGGCAGCCAATTTGTGCCTGCAAG
CAGCGAGCATGTGCATATTTTGACGATTGGCTCATATGCTTTGACCCTCAAAACTTTTTTTCGCCCCGAGTTGGCTCAAT
TTCGCGCAAGTTATCAATGGCATGTCGATGGCGAATTGCTGAGTATCACGATTGATCATGGCCAATTACACATTCAGCAA
GGCCCAAGCCAACAACCTGATGCGATTATCCACACGACAATCGAGCTTTATTTGCAGCTCTTGCAAGGTGCAATCAGTCC
GCAACAAGCAGTTGCTCAAGGTTTGATGCACATCCAAGGCGATTTAGCGGCCCTCGATCGGTTCCTCGCCTGCTGTGCAA
TTAATACCCCAACTTAA

Upstream 100 bases:

>100_bases
ACATTTTCTATTTTATAAGCCTTACTTCAAAAAGTCAAGCCTGAATTTCAGGTATACTTAATCAAGAATTCTTTTTTTGA
AGCAGACTTGCAGCACGTTT

Downstream 100 bases:

>100_bases
ATTGGATACTTATTAATAATATTAAGGGCTTGACAAACCTTTAAATTCCATTAATATAATCGGTATCGTTTCCGGAAACG
ATACCGATTTTTTATCGTTG

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MNNRSYNQYCGLAYALELLGERWTILLIRELVAGPRRFKDLLNGLPGISTNLLTERLKHLELHGMIVRQVLAPPAGSTVY
GLTDLGRGLEPTLIELGKWGSQFVPASSEHVHILTIGSYALTLKTFFRPELAQFRASYQWHVDGELLSITIDHGQLHIQQ
GPSQQPDAIIHTTIELYLQLLQGAISPQQAVAQGLMHIQGDLAALDRFLACCAINTPT

Sequences:

>Translated_218_residues
MNNRSYNQYCGLAYALELLGERWTILLIRELVAGPRRFKDLLNGLPGISTNLLTERLKHLELHGMIVRQVLAPPAGSTVY
GLTDLGRGLEPTLIELGKWGSQFVPASSEHVHILTIGSYALTLKTFFRPELAQFRASYQWHVDGELLSITIDHGQLHIQQ
GPSQQPDAIIHTTIELYLQLLQGAISPQQAVAQGLMHIQGDLAALDRFLACCAINTPT
>Mature_218_residues
MNNRSYNQYCGLAYALELLGERWTILLIRELVAGPRRFKDLLNGLPGISTNLLTERLKHLELHGMIVRQVLAPPAGSTVY
GLTDLGRGLEPTLIELGKWGSQFVPASSEHVHILTIGSYALTLKTFFRPELAQFRASYQWHVDGELLSITIDHGQLHIQQ
GPSQQPDAIIHTTIELYLQLLQGAISPQQAVAQGLMHIQGDLAALDRFLACCAINTPT

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 24142; Mature: 24142

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNRSYNQYCGLAYALELLGERWTILLIRELVAGPRRFKDLLNGLPGISTNLLTERLKHL
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHH
ELHGMIVRQVLAPPAGSTVYGLTDLGRGLEPTLIELGKWGSQFVPASSEHVHILTIGSYA
HHHHHHHHHHHCCCCCCEEEEHHHHCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCHH
LTLKTFFRPELAQFRASYQWHVDGELLSITIDHGQLHIQQGPSQQPDAIIHTTIELYLQL
HHHHHHHCHHHHHHHCCCEEEECCEEEEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHH
LQGAISPQQAVAQGLMHIQGDLAALDRFLACCAINTPT
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNNRSYNQYCGLAYALELLGERWTILLIRELVAGPRRFKDLLNGLPGISTNLLTERLKHL
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHH
ELHGMIVRQVLAPPAGSTVYGLTDLGRGLEPTLIELGKWGSQFVPASSEHVHILTIGSYA
HHHHHHHHHHHCCCCCCEEEEHHHHCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCHH
LTLKTFFRPELAQFRASYQWHVDGELLSITIDHGQLHIQQGPSQQPDAIIHTTIELYLQL
HHHHHHHCHHHHHHHCCCEEEECCEEEEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHH
LQGAISPQQAVAQGLMHIQGDLAALDRFLACCAINTPT
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]