| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898043
Identifier: 159898043
GI number: 159898043
Start: 1770341
End: 1772545
Strand: Reverse
Name: 159898043
Synonym: Haur_1518
Alternate gene names: NA
Gene position: 1772545-1770341 (Counterclockwise)
Preceding gene: 159898044
Following gene: 159898042
Centisome position: 27.93
GC content: 51.43
Gene sequence:
>2205_bases ATGGATACTCATTTTTGGCGTAAATTGGCCGCAGTTGGCTTAGCCTGTAGCATTTTGTTTACCTTTATCACGACGGCTCC TCAAGCGGCATTTGCCGCCGCCCCGCTTGGACAAACGATTTGGTTGCGGGCAATTTCAAGTGGGAAATATGTTTCAGCCG ATGCCAATCGCGGGGCCAATTCGCCCTTGGTTGCTGATCGTGATACTGCCAATGGTTGGGAACAGTTTCAGGTGGTTGAT GCTGGCAATGGCTATGTTGGCCTGCGGGCGTTGGCGACTGGCAAGTTTGTTTCAGCTGATCAAAATTTTGCTAACACACC ACTCGTTGCCGACCGTAACACGATTAGCGGTTGGGAACAATTTCAATGGGTCGATGTTACGGCAGGCCAAGTGCAATTAC GCTCGATTGGCAATAATAATTTCGTTTCCAGCGATCTTAATCTTGGCACCCACGCACCATTGGTTGCCAACCGACCAACA GCTTCGGGCTGGGAAACCTTCAATTGGGGCGTGGTTGGCACAAATCCAACGCCTAACCCAACCACCCCGCCGGGCACAAC CCCCGATTTTGGCCCGAATGTATTGATGTTTGATCCATCGATGTCAACTGCTTCGATTCAAGCTCAAATCAACAATGTCT ATGGCATTCAGCAAAATAGCCAATTTGGCTCAGCTCGCTATACCTTGATGTTCAAACCTGGCACCTATAACGGCTTGAAC ATTCCGGTTGGCTTTTATACCCAATTGCTGGGCGTTGGCGCATCGCCGGATAGCGTCAACATCAACGGTAATGTTTATTC AAATGCCTACTTGGGCAACGATAATGCTACCTGTAATTTCTGGCGCGGCGCTGAAGGCCTTGCGATTACGCCTTCGAATG GCACGATGCAATGGGCAGTCTCGCAGGCTGTGCCATTCCGCCGAATGCACATTCGCGGCAATATGAAACTCAATCAAAAT AATGGTTGGTCGAGCGGCGGCTGGATGTCGGATGTCTTAGTTGATGGCAACGTCAACTCTGGCACCCAGCAACAATGGAT TTCGCGCAATACCCAATGGGGCAGCTGGACTGGCTCAAACTGGAATATGGTGTTTGTTGGCGTGACCAACCCGCCAGCAG GCAGTTGGCCCAACCCACCATACACCAAAATTGCCCAAACCCCGATTGTGCGTGAAAAGCCATTTGTCACCGTCGATGCT GCTGGCAATTGGGGCGTGCGGGTTCCCTCGTTGCGCACCAACAGCACTGGCATCACATGGGCTGGTGGCTCAACGCCAGG CACGACCATCGCCATGAGCCAATTCTTTATCGCCAAACCAAGCGATAGTGCCGCAACGATCAATGCCCAATTAGCCGCAG GCAAACATCTATTGTTTACGCCTGGAATCTATGCATTAAATGATACGATTCGCGTGAATAACCCCAATACGGTGGTGTTG GGCTTGGGCTTTGCAACCTTGCGCCCAACCACGGGCTTGGCCGCGATGACTGTCGCTGATGTTGATGGCGTGACGATCGC TGGCGTATTGTTTGATGCAGGCCTGATTAACTCGCCAGTTTTGCTGGAAGTTGGGCCAAATGGCAGTAATGCTAGCCATG CTGCCAACCCAATTGTCTTGCACGACGTGATTTTCCGCGTTGGTGGGGCCGCCGCTGGCAAAGCCTCAACCAGCTTCCGA ATTAATAGCCACGACACGATTGTTGACCATACTTGGGTTTGGCGGGCCGACCACGGCGACGGCGTGGCCTGGAATAGCAA TACAGGTGCCAATGGAGTGATCGTCAATGGCAATAATGTCACGATCTACGGCCTGTTTGTCGAACACTATCAACAATATC AGGTACTTTGGCAAGGCAATGGTGGCCGCGTCTACTTCTATCAATCGGAAATTCCCTACGATCCGCCAACTCAAGATAGC TGGCGCAGTGCAGCGGGAGTCAACGGTTGGGCCTCATACAAAGTTGCCGATAATGTAACCAGCCACGAAGCTTGGGGACT CGGCATTTACAGCGTTTTCACCAACCCTAACATCTGGCTAGCTCGGGCCATCGAAGCACCAAACAACCTCAATGTTCGCT TTCACAACATGATTTCAGTGGCAATTGGGGCCAATGGCGGCATTAGCAACGTGATTAATAATACTGGTGGCTCAACCCAA CCAAATGTCACCTACACTCCGAAAGTAACCAATTACCCGAATTAA
Upstream 100 bases:
>100_bases GTCCGTGAGCAGGTCACCGTTCCACAAGTTCGCCTAGCGCAGTGTCGGATAGCTGTTTTCGAGGATGAAACTGGGTTCTA TCCACGGAGGAACGAATTGA
Downstream 100 bases:
>100_bases TCCGCTTTGTAGCCCAAACCACCGCTTGGTTGATTGCCAGGTGGTGGTTTTTTGTAGACGACGATCAAGGCCTGTGTTAA ACTTGCGCCGCAACCCCAAT
Product: coagulation factor 5/8 type domain-containing protein
Products: NA
Alternate protein names: Coagulation Factor 5/8 Type Domain Protein; Glycoside Hydrolase Family; Coagulation Factor 5/8 Type Domain-Containing Protein; Adenylyl Cyclase Class-3/4/Guanylyl Cyclase; Glucan Endo-1 6-Beta-Glucosidase; Xylan 1 4-Beta-Xylosidase; Protease-Like Protein; Coagulation Factor 5/8 Type; Endo-Beta-1 3-Glucanase; Peptidase S8 And; Beta-Agarase; Serine Protease; Fibronectin Type III Domain-Containing Protein; S-Layer Domain Protein; S-Layer Domain-Containing Protein; Ricin B Lectin; Pkd Domain Containing Protein; Metallophosphoesterase; Glycoside Hydrolase Family 3 Domain Protein; Lipolytic Protein G-D-S-L Family; Glycoside Hydrolase
Number of amino acids: Translated: 734; Mature: 734
Protein sequence:
>734_residues MDTHFWRKLAAVGLACSILFTFITTAPQAAFAAAPLGQTIWLRAISSGKYVSADANRGANSPLVADRDTANGWEQFQVVD AGNGYVGLRALATGKFVSADQNFANTPLVADRNTISGWEQFQWVDVTAGQVQLRSIGNNNFVSSDLNLGTHAPLVANRPT ASGWETFNWGVVGTNPTPNPTTPPGTTPDFGPNVLMFDPSMSTASIQAQINNVYGIQQNSQFGSARYTLMFKPGTYNGLN IPVGFYTQLLGVGASPDSVNINGNVYSNAYLGNDNATCNFWRGAEGLAITPSNGTMQWAVSQAVPFRRMHIRGNMKLNQN NGWSSGGWMSDVLVDGNVNSGTQQQWISRNTQWGSWTGSNWNMVFVGVTNPPAGSWPNPPYTKIAQTPIVREKPFVTVDA AGNWGVRVPSLRTNSTGITWAGGSTPGTTIAMSQFFIAKPSDSAATINAQLAAGKHLLFTPGIYALNDTIRVNNPNTVVL GLGFATLRPTTGLAAMTVADVDGVTIAGVLFDAGLINSPVLLEVGPNGSNASHAANPIVLHDVIFRVGGAAAGKASTSFR INSHDTIVDHTWVWRADHGDGVAWNSNTGANGVIVNGNNVTIYGLFVEHYQQYQVLWQGNGGRVYFYQSEIPYDPPTQDS WRSAAGVNGWASYKVADNVTSHEAWGLGIYSVFTNPNIWLARAIEAPNNLNVRFHNMISVAIGANGGISNVINNTGGSTQ PNVTYTPKVTNYPN
Sequences:
>Translated_734_residues MDTHFWRKLAAVGLACSILFTFITTAPQAAFAAAPLGQTIWLRAISSGKYVSADANRGANSPLVADRDTANGWEQFQVVD AGNGYVGLRALATGKFVSADQNFANTPLVADRNTISGWEQFQWVDVTAGQVQLRSIGNNNFVSSDLNLGTHAPLVANRPT ASGWETFNWGVVGTNPTPNPTTPPGTTPDFGPNVLMFDPSMSTASIQAQINNVYGIQQNSQFGSARYTLMFKPGTYNGLN IPVGFYTQLLGVGASPDSVNINGNVYSNAYLGNDNATCNFWRGAEGLAITPSNGTMQWAVSQAVPFRRMHIRGNMKLNQN NGWSSGGWMSDVLVDGNVNSGTQQQWISRNTQWGSWTGSNWNMVFVGVTNPPAGSWPNPPYTKIAQTPIVREKPFVTVDA AGNWGVRVPSLRTNSTGITWAGGSTPGTTIAMSQFFIAKPSDSAATINAQLAAGKHLLFTPGIYALNDTIRVNNPNTVVL GLGFATLRPTTGLAAMTVADVDGVTIAGVLFDAGLINSPVLLEVGPNGSNASHAANPIVLHDVIFRVGGAAAGKASTSFR INSHDTIVDHTWVWRADHGDGVAWNSNTGANGVIVNGNNVTIYGLFVEHYQQYQVLWQGNGGRVYFYQSEIPYDPPTQDS WRSAAGVNGWASYKVADNVTSHEAWGLGIYSVFTNPNIWLARAIEAPNNLNVRFHNMISVAIGANGGISNVINNTGGSTQ PNVTYTPKVTNYPN >Mature_734_residues MDTHFWRKLAAVGLACSILFTFITTAPQAAFAAAPLGQTIWLRAISSGKYVSADANRGANSPLVADRDTANGWEQFQVVD AGNGYVGLRALATGKFVSADQNFANTPLVADRNTISGWEQFQWVDVTAGQVQLRSIGNNNFVSSDLNLGTHAPLVANRPT ASGWETFNWGVVGTNPTPNPTTPPGTTPDFGPNVLMFDPSMSTASIQAQINNVYGIQQNSQFGSARYTLMFKPGTYNGLN IPVGFYTQLLGVGASPDSVNINGNVYSNAYLGNDNATCNFWRGAEGLAITPSNGTMQWAVSQAVPFRRMHIRGNMKLNQN NGWSSGGWMSDVLVDGNVNSGTQQQWISRNTQWGSWTGSNWNMVFVGVTNPPAGSWPNPPYTKIAQTPIVREKPFVTVDA AGNWGVRVPSLRTNSTGITWAGGSTPGTTIAMSQFFIAKPSDSAATINAQLAAGKHLLFTPGIYALNDTIRVNNPNTVVL GLGFATLRPTTGLAAMTVADVDGVTIAGVLFDAGLINSPVLLEVGPNGSNASHAANPIVLHDVIFRVGGAAAGKASTSFR INSHDTIVDHTWVWRADHGDGVAWNSNTGANGVIVNGNNVTIYGLFVEHYQQYQVLWQGNGGRVYFYQSEIPYDPPTQDS WRSAAGVNGWASYKVADNVTSHEAWGLGIYSVFTNPNIWLARAIEAPNNLNVRFHNMISVAIGANGGISNVINNTGGSTQ PNVTYTPKVTNYPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78458; Mature: 78458
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTHFWRKLAAVGLACSILFTFITTAPQAAFAAAPLGQTIWLRAISSGKYVSADANRGAN CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEECCCCEEECCCCCCCC SPLVADRDTANGWEQFQVVDAGNGYVGLRALATGKFVSADQNFANTPLVADRNTISGWEQ CCEEECCCCCCCCEEEEEEECCCCEEEEEEEECCCEEECCCCCCCCCEEECCCCCCCCCE FQWVDVTAGQVQLRSIGNNNFVSSDLNLGTHAPLVANRPTASGWETFNWGVVGTNPTPNP EEEEEECCCEEEEEECCCCCEEECCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCC TTPPGTTPDFGPNVLMFDPSMSTASIQAQINNVYGIQQNSQFGSARYTLMFKPGTYNGLN CCCCCCCCCCCCCEEEECCCCCCEEEEEEECEEEEECCCCCCCCEEEEEEECCCCCCCCC IPVGFYTQLLGVGASPDSVNINGNVYSNAYLGNDNATCNFWRGAEGLAITPSNGTMQWAV CCHHHHHHHHCCCCCCCEEEECCEEEEEEEECCCCCEEEEEECCCCEEEECCCCCEEEEE SQAVPFRRMHIRGNMKLNQNNGWSSGGWMSDVLVDGNVNSGTQQQWISRNTQWGSWTGSN CCCCCEEEEEEEECEEEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHCCCCCCCEECCC WNMVFVGVTNPPAGSWPNPPYTKIAQTPIVREKPFVTVDAAGNWGVRVPSLRTNSTGITW CEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCEECCCEEECCCEEEE AGGSTPGTTIAMSQFFIAKPSDSAATINAQLAAGKHLLFTPGIYALNDTIRVNNPNTVVL CCCCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCEEEECCCEEEECCEEEECCCCEEEE GLGFATLRPTTGLAAMTVADVDGVTIAGVLFDAGLINSPVLLEVGPNGSNASHAANPIVL ECCEEEECCCCCEEEEEEECCCCEEEEEEEHCCCCCCCCEEEEECCCCCCCCCCCCCEEE HDVIFRVGGAAAGKASTSFRINSHDTIVDHTWVWRADHGDGVAWNSNTGANGVIVNGNNV EEHHHHHCCCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCEEECCCCCCCEEEEECCCE TIYGLFVEHYQQYQVLWQGNGGRVYFYQSEIPYDPPTQDSWRSAAGVNGWASYKVADNVT EEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCC SHEAWGLGIYSVFTNPNIWLARAIEAPNNLNVRFHNMISVAIGANGGISNVINNTGGSTQ CCCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEEEEECCCCHHHHHCCCCCCCC PNVTYTPKVTNYPN CCEEECCCCCCCCC >Mature Secondary Structure MDTHFWRKLAAVGLACSILFTFITTAPQAAFAAAPLGQTIWLRAISSGKYVSADANRGAN CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEECCCCEEECCCCCCCC SPLVADRDTANGWEQFQVVDAGNGYVGLRALATGKFVSADQNFANTPLVADRNTISGWEQ CCEEECCCCCCCCEEEEEEECCCCEEEEEEEECCCEEECCCCCCCCCEEECCCCCCCCCE FQWVDVTAGQVQLRSIGNNNFVSSDLNLGTHAPLVANRPTASGWETFNWGVVGTNPTPNP EEEEEECCCEEEEEECCCCCEEECCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCC TTPPGTTPDFGPNVLMFDPSMSTASIQAQINNVYGIQQNSQFGSARYTLMFKPGTYNGLN CCCCCCCCCCCCCEEEECCCCCCEEEEEEECEEEEECCCCCCCCEEEEEEECCCCCCCCC IPVGFYTQLLGVGASPDSVNINGNVYSNAYLGNDNATCNFWRGAEGLAITPSNGTMQWAV CCHHHHHHHHCCCCCCCEEEECCEEEEEEEECCCCCEEEEEECCCCEEEECCCCCEEEEE SQAVPFRRMHIRGNMKLNQNNGWSSGGWMSDVLVDGNVNSGTQQQWISRNTQWGSWTGSN CCCCCEEEEEEEECEEEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHCCCCCCCEECCC WNMVFVGVTNPPAGSWPNPPYTKIAQTPIVREKPFVTVDAAGNWGVRVPSLRTNSTGITW CEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCEECCCEEECCCEEEE AGGSTPGTTIAMSQFFIAKPSDSAATINAQLAAGKHLLFTPGIYALNDTIRVNNPNTVVL CCCCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCEEEECCCEEEECCEEEECCCCEEEE GLGFATLRPTTGLAAMTVADVDGVTIAGVLFDAGLINSPVLLEVGPNGSNASHAANPIVL ECCEEEECCCCCEEEEEEECCCCEEEEEEEHCCCCCCCCEEEEECCCCCCCCCCCCCEEE HDVIFRVGGAAAGKASTSFRINSHDTIVDHTWVWRADHGDGVAWNSNTGANGVIVNGNNV EEHHHHHCCCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCEEECCCCCCCEEEEECCCE TIYGLFVEHYQQYQVLWQGNGGRVYFYQSEIPYDPPTQDSWRSAAGVNGWASYKVADNVT EEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCC SHEAWGLGIYSVFTNPNIWLARAIEAPNNLNVRFHNMISVAIGANGGISNVINNTGGSTQ CCCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEEEEECCCCHHHHHCCCCCCCC PNVTYTPKVTNYPN CCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA