| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897687
Identifier: 159897687
GI number: 159897687
Start: 1330281
End: 1330673
Strand: Reverse
Name: 159897687
Synonym: Haur_1158
Alternate gene names: NA
Gene position: 1330673-1330281 (Counterclockwise)
Preceding gene: 159897688
Following gene: 159897686
Centisome position: 20.97
GC content: 51.4
Gene sequence:
>393_bases ATGACGGTTGAACGTGTGCTAGCAACTGAACAAACGGAAGCCTTGGTTGCGAAACTCAGCCAATTGCATGGCCCATTGTT GTTTCATCAATCGGGTGGCTGTTGCGATGGTAGTGCCCCAATGTGCTATCCCCGCCAAGAATTTCGAATCGGCCAGCACG ATGTGTATCTTGGCGAGATTGCAGGCTGCCCATTTTACATTAGCGGGCCGCAATTTGAATATTGGCAACATACCCAATTA ACCATCGATGTGGTCAAAGGCCGTGGCAGTGGTTTTTCGGTCGAAGCGCCTGAAGGTGTGCGCTTTTTAACTCGTTCGCG GGTATTTAGCGATGCCGAATATTCCGAATTGCAAGCCGCTGGGCCACCCTTGCGCGGCCAACAACATGGCTAA
Upstream 100 bases:
>100_bases ATCCAATGGGCTTCTTTTAGTTGATTGGTGCTTCCAAACGTCACACTACCGCAGGTATGCTGCTTGCGGTAGTGTTTTTA TCTCAACAAGGAGTTGGATC
Downstream 100 bases:
>100_bases GAACATAGAACATAGAACATAGGGATTAGGAGCCAGATTTTTGATCCACGAGGGTACAGAGGATTGGAACCGCGAAGAGC GCGAAGAACGCCAAGGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTVERVLATEQTEALVAKLSQLHGPLLFHQSGGCCDGSAPMCYPRQEFRIGQHDVYLGEIAGCPFYISGPQFEYWQHTQL TIDVVKGRGSGFSVEAPEGVRFLTRSRVFSDAEYSELQAAGPPLRGQQHG
Sequences:
>Translated_130_residues MTVERVLATEQTEALVAKLSQLHGPLLFHQSGGCCDGSAPMCYPRQEFRIGQHDVYLGEIAGCPFYISGPQFEYWQHTQL TIDVVKGRGSGFSVEAPEGVRFLTRSRVFSDAEYSELQAAGPPLRGQQHG >Mature_129_residues TVERVLATEQTEALVAKLSQLHGPLLFHQSGGCCDGSAPMCYPRQEFRIGQHDVYLGEIAGCPFYISGPQFEYWQHTQLT IDVVKGRGSGFSVEAPEGVRFLTRSRVFSDAEYSELQAAGPPLRGQQHG
Specific function: Unknown
COG id: COG3564
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14330; Mature: 14199
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVERVLATEQTEALVAKLSQLHGPLLFHQSGGCCDGSAPMCYPRQEFRIGQHDVYLGEI CCHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHCCCCCCEEEEEE AGCPFYISGPQFEYWQHTQLTIDVVKGRGSGFSVEAPEGVRFLTRSRVFSDAEYSELQAA CCCCEEECCCCCCCEECCEEEEEEEECCCCCCEEECCCCHHHHHHHHHCCCCCHHHHHHC GPPLRGQQHG CCCCCCCCCC >Mature Secondary Structure TVERVLATEQTEALVAKLSQLHGPLLFHQSGGCCDGSAPMCYPRQEFRIGQHDVYLGEI CHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHCCCCCCEEEEEE AGCPFYISGPQFEYWQHTQLTIDVVKGRGSGFSVEAPEGVRFLTRSRVFSDAEYSELQAA CCCCEEECCCCCCCEECCEEEEEEEECCCCCCEEECCCCHHHHHHHHHCCCCCHHHHHHC GPPLRGQQHG CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA