| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is glgP [H]
Identifier: 159897677
GI number: 159897677
Start: 1316404
End: 1318542
Strand: Direct
Name: glgP [H]
Synonym: Haur_1148
Alternate gene names: 159897677
Gene position: 1316404-1318542 (Clockwise)
Preceding gene: 159897673
Following gene: 159897678
Centisome position: 20.74
GC content: 51.24
Gene sequence:
>2139_bases ATGAACGTTGCTGAATTACCACCGCTGTTTGCCCCCCTACCCCAACGGATCAACCGACTCTATGAGTTGGCTTATAACCT TTGGTGGAGCTGGCAACCAGAAGCCCAAGCGCTTTACCAAACGATTGATGCAACGTTGTGGGAGCGCACAGGCCATAATC CGGTGAAATTTTTGCGTGAAGTTAGCTTGGCTAGCCTCGAACAAAAAGCCCTTGATAGCAATTATTTGGCCCAGTATGAT CGGGTAACGATCAAATTTGATCATTATATGCGTGATGATCAAACGTGGTTTGCCCGCACCCATCCTGAGCTTAAAGATCA AACGATTGCCTATTTTTCGGCTGAATTTGGCATTCACGAGTCGTTGCCAATTTACTCTGGTGGCTTGGGCATTTTGTCGG GCGACCATTGTAAAGAAGCCAGCGATATTGGTTTGCCATTCGTTGGGGTTGGCTTTTTATATCCTCAAGGTTATTTTCGC CAATTTATCAATAGCGAAGGCACCCAAGAAGCGCTCTACGAACGCTTGAATTTTGCTGAGTTGCCAGCCTTGGCTGTGCG CAATAGCGATGGCAGCGAATTACGCGTGAGCGTCGATTTGCCCGGGCGCATGGTGTTTGTCAAAGTTTGGCGCTTCCAGG TTGGCCGCATCACGCTGCTGCTGATGGATACCGATGTTGACGAAAATCGCCCTGAAGATCGCGAATTGTCGGCTCGTTTG TATGGCGGCGATCAATGGCTGCGGGTCGCTCAAGAAATCATCTTGGGGATTGCTGGCGTGCGAGTGTTACGCGCTCTCAA TATCAATCCAACAGTTTGGCACATGAATGAAGGTCACTCAGCATTCTTGGGCTTGGAATTGTTGCGCGAACGAGTTCAAC GTGGCGAAAACCTTGAACATGCCGTCAGCGAAGTGCGCAAACGCTCAGTCTTTACCACCCATACGCCAGTGCCTGCTGGC AACGATGCCTTCCCACTCGATCTGATCGATCAATTCTTCCACAACTACTGGCCACAATTGGGCATTGATCGCGACACCTT TATGAATATTGCGTTGCAGCAACAAAGCTGGGGGCCAACCTTCAGCATGACCGTGCTCGCATTGCGCTTATCGGAATATC ATAACGGCGTGAGCGAATTGCACGGCGCTGTGGCTCGTCAAATGTGGCAATTCCTGTATCCAGGCAAATCAGTTGACGAA GTGCCAATTGGCCATGTGACCAACGGCGTGCACTCGGATACGTGGTTGGCTCCAGCCATGGCCAATATGTACGACTCGGT GCTTGGCGCTGGTTGGCGCGAACGGATGGACGACCCTGCAACATGGGATCGCATCACGACGATGCCCGATGAAGTGCTTT GGGGCGTACACTCAGGCCAAAAGCACGATTTGGCTCGCTTTATTCGCGAACGCGCTTGGCAGCGCCAACGTCGTTTAGGC TACCATCGCGACGATGCAATTAGCGGCGATGTTAACCCCAACGCGTTGTTGATTGGCTTCGCACGCCGATTTGCCACCTA CAAACGGGCGACCTTGATTTTCCGCGATTTGGATCGGATCAAGCGGATTTTGAACAACGCTGAGCGTCCCGTTCAAATCA TTTTCGCTGGTAAATCGCACCCAGCCGATGAGCCAGGCAAGAGCTTTATTCGCGCCGTTTACAATATGGCTCGCGACCCA GAGCTGCGTGGCAAGATCTTCTTTATCGAAGAATATGATATTAACGTTGGCCGCCATTTGGTACAAAGTGTTGACGTATG GTTGAACAACCCACGCCGACCATTGGAAGCATCGGGAACCAGCGGCGAAAAAGCGGGCATGAACGGTGTGCCAAACCTAA GCGTGCTTGACGGCTGGTGGCGCGAAGCCTACAACGGCAAGAACGGTTGGGCGATTGGGCGCGAAGCTGGCTACGACGAT CTTGAACAACAAGATATTGACGATGCTGAATCGTTGTATAGCTTGTTGGAAAACGAAGTTATTCCATCGTTCTATGATCG TGATGCCAATGGCTTGCCCCACAAATGGATTGCGACCATGAAGGAATCGATTCGCACGGTTGCCCCACAATTTAGCTTCC GTCGCATGCTCAAAGATTACGTAGCCCAATACTACGTGCCAGGCATGCAAGCCGAATAA
Upstream 100 bases:
>100_bases GCACTAACGTTCAGGCTCAAAACAAACAACGCGATGTTGCGACAGGCTTTTTCTGGCTGGCGGCATCGTTTTTTAATTAA TCGTAGTACAAGGAGTTGCA
Downstream 100 bases:
>100_bases GCCGCCGTTTGTAGCGTGAGCCTGTGCTACAGCAAGGCTTTTTTGGCTTTTTGACAATGTTTGTCAGTCAAACAAACGAG CAAGGTTTTGAAAAAGCGCA
Product: alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 712; Mature: 712
Protein sequence:
>712_residues MNVAELPPLFAPLPQRINRLYELAYNLWWSWQPEAQALYQTIDATLWERTGHNPVKFLREVSLASLEQKALDSNYLAQYD RVTIKFDHYMRDDQTWFARTHPELKDQTIAYFSAEFGIHESLPIYSGGLGILSGDHCKEASDIGLPFVGVGFLYPQGYFR QFINSEGTQEALYERLNFAELPALAVRNSDGSELRVSVDLPGRMVFVKVWRFQVGRITLLLMDTDVDENRPEDRELSARL YGGDQWLRVAQEIILGIAGVRVLRALNINPTVWHMNEGHSAFLGLELLRERVQRGENLEHAVSEVRKRSVFTTHTPVPAG NDAFPLDLIDQFFHNYWPQLGIDRDTFMNIALQQQSWGPTFSMTVLALRLSEYHNGVSELHGAVARQMWQFLYPGKSVDE VPIGHVTNGVHSDTWLAPAMANMYDSVLGAGWRERMDDPATWDRITTMPDEVLWGVHSGQKHDLARFIRERAWQRQRRLG YHRDDAISGDVNPNALLIGFARRFATYKRATLIFRDLDRIKRILNNAERPVQIIFAGKSHPADEPGKSFIRAVYNMARDP ELRGKIFFIEEYDINVGRHLVQSVDVWLNNPRRPLEASGTSGEKAGMNGVPNLSVLDGWWREAYNGKNGWAIGREAGYDD LEQQDIDDAESLYSLLENEVIPSFYDRDANGLPHKWIATMKESIRTVAPQFSFRRMLKDYVAQYYVPGMQAE
Sequences:
>Translated_712_residues MNVAELPPLFAPLPQRINRLYELAYNLWWSWQPEAQALYQTIDATLWERTGHNPVKFLREVSLASLEQKALDSNYLAQYD RVTIKFDHYMRDDQTWFARTHPELKDQTIAYFSAEFGIHESLPIYSGGLGILSGDHCKEASDIGLPFVGVGFLYPQGYFR QFINSEGTQEALYERLNFAELPALAVRNSDGSELRVSVDLPGRMVFVKVWRFQVGRITLLLMDTDVDENRPEDRELSARL YGGDQWLRVAQEIILGIAGVRVLRALNINPTVWHMNEGHSAFLGLELLRERVQRGENLEHAVSEVRKRSVFTTHTPVPAG NDAFPLDLIDQFFHNYWPQLGIDRDTFMNIALQQQSWGPTFSMTVLALRLSEYHNGVSELHGAVARQMWQFLYPGKSVDE VPIGHVTNGVHSDTWLAPAMANMYDSVLGAGWRERMDDPATWDRITTMPDEVLWGVHSGQKHDLARFIRERAWQRQRRLG YHRDDAISGDVNPNALLIGFARRFATYKRATLIFRDLDRIKRILNNAERPVQIIFAGKSHPADEPGKSFIRAVYNMARDP ELRGKIFFIEEYDINVGRHLVQSVDVWLNNPRRPLEASGTSGEKAGMNGVPNLSVLDGWWREAYNGKNGWAIGREAGYDD LEQQDIDDAESLYSLLENEVIPSFYDRDANGLPHKWIATMKESIRTVAPQFSFRRMLKDYVAQYYVPGMQAE >Mature_712_residues MNVAELPPLFAPLPQRINRLYELAYNLWWSWQPEAQALYQTIDATLWERTGHNPVKFLREVSLASLEQKALDSNYLAQYD RVTIKFDHYMRDDQTWFARTHPELKDQTIAYFSAEFGIHESLPIYSGGLGILSGDHCKEASDIGLPFVGVGFLYPQGYFR QFINSEGTQEALYERLNFAELPALAVRNSDGSELRVSVDLPGRMVFVKVWRFQVGRITLLLMDTDVDENRPEDRELSARL YGGDQWLRVAQEIILGIAGVRVLRALNINPTVWHMNEGHSAFLGLELLRERVQRGENLEHAVSEVRKRSVFTTHTPVPAG NDAFPLDLIDQFFHNYWPQLGIDRDTFMNIALQQQSWGPTFSMTVLALRLSEYHNGVSELHGAVARQMWQFLYPGKSVDE VPIGHVTNGVHSDTWLAPAMANMYDSVLGAGWRERMDDPATWDRITTMPDEVLWGVHSGQKHDLARFIRERAWQRQRRLG YHRDDAISGDVNPNALLIGFARRFATYKRATLIFRDLDRIKRILNNAERPVQIIFAGKSHPADEPGKSFIRAVYNMARDP ELRGKIFFIEEYDINVGRHLVQSVDVWLNNPRRPLEASGTSGEKAGMNGVPNLSVLDGWWREAYNGKNGWAIGREAGYDD LEQQDIDDAESLYSLLENEVIPSFYDRDANGLPHKWIATMKESIRTVAPQFSFRRMLKDYVAQYYVPGMQAE
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Escherichia coli, GI2367228, Length=378, Percent_Identity=24.3386243386243, Blast_Score=87, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 81637; Mature: 81637
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVAELPPLFAPLPQRINRLYELAYNLWWSWQPEAQALYQTIDATLWERTGHNPVKFLRE CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH VSLASLEQKALDSNYLAQYDRVTIKFDHYMRDDQTWFARTHPELKDQTIAYFSAEFGIHE HHHHHHHHHHCCHHHHHHHCCEEEEECCCCCCCCCEEECCCCCCCCCCEEEEEHHCCCCC SLPIYSGGLGILSGDHCKEASDIGLPFVGVGFLYPQGYFRQFINSEGTQEALYERLNFAE CCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCHHH LPALAVRNSDGSELRVSVDLPGRMVFVKVWRFQVGRITLLLMDTDVDENRPEDRELSARL CCEEEEECCCCCEEEEEECCCCCEEEHEEHHHEECEEEEEEEECCCCCCCCCCHHHHEEE YGGDQWLRVAQEIILGIAGVRVLRALNINPTVWHMNEGHSAFLGLELLRERVQRGENLEH ECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHH AVSEVRKRSVFTTHTPVPAGNDAFPLDLIDQFFHNYWPQLGIDRDTFMNIALQQQSWGPT HHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHEEECCCCCCC FSMTVLALRLSEYHNGVSELHGAVARQMWQFLYPGKSVDEVPIGHVTNGVHSDTWLAPAM HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCHHHHHH ANMYDSVLGAGWRERMDDPATWDRITTMPDEVLWGVHSGQKHDLARFIRERAWQRQRRLG HHHHHHHHCCCHHHHCCCCCCHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC YHRDDAISGDVNPNALLIGFARRFATYKRATLIFRDLDRIKRILNNAERPVQIIFAGKSH CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC PADEPGKSFIRAVYNMARDPELRGKIFFIEEYDINVGRHLVQSVDVWLNNPRRPLEASGT CCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCC SGEKAGMNGVPNLSVLDGWWREAYNGKNGWAIGREAGYDDLEQQDIDDAESLYSLLENEV CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCC IPSFYDRDANGLPHKWIATMKESIRTVAPQFSFRRMLKDYVAQYYVPGMQAE CCHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNVAELPPLFAPLPQRINRLYELAYNLWWSWQPEAQALYQTIDATLWERTGHNPVKFLRE CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH VSLASLEQKALDSNYLAQYDRVTIKFDHYMRDDQTWFARTHPELKDQTIAYFSAEFGIHE HHHHHHHHHHCCHHHHHHHCCEEEEECCCCCCCCCEEECCCCCCCCCCEEEEEHHCCCCC SLPIYSGGLGILSGDHCKEASDIGLPFVGVGFLYPQGYFRQFINSEGTQEALYERLNFAE CCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCHHH LPALAVRNSDGSELRVSVDLPGRMVFVKVWRFQVGRITLLLMDTDVDENRPEDRELSARL CCEEEEECCCCCEEEEEECCCCCEEEHEEHHHEECEEEEEEEECCCCCCCCCCHHHHEEE YGGDQWLRVAQEIILGIAGVRVLRALNINPTVWHMNEGHSAFLGLELLRERVQRGENLEH ECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHH AVSEVRKRSVFTTHTPVPAGNDAFPLDLIDQFFHNYWPQLGIDRDTFMNIALQQQSWGPT HHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHEEECCCCCCC FSMTVLALRLSEYHNGVSELHGAVARQMWQFLYPGKSVDEVPIGHVTNGVHSDTWLAPAM HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCHHHHHH ANMYDSVLGAGWRERMDDPATWDRITTMPDEVLWGVHSGQKHDLARFIRERAWQRQRRLG HHHHHHHHCCCHHHHCCCCCCHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC YHRDDAISGDVNPNALLIGFARRFATYKRATLIFRDLDRIKRILNNAERPVQIIFAGKSH CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC PADEPGKSFIRAVYNMARDPELRGKIFFIEEYDINVGRHLVQSVDVWLNNPRRPLEASGT CCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCC SGEKAGMNGVPNLSVLDGWWREAYNGKNGWAIGREAGYDDLEQQDIDDAESLYSLLENEV CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCC IPSFYDRDANGLPHKWIATMKESIRTVAPQFSFRRMLKDYVAQYYVPGMQAE CCHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]