| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897651
Identifier: 159897651
GI number: 159897651
Start: 1284694
End: 1286736
Strand: Direct
Name: 159897651
Synonym: Haur_1122
Alternate gene names: NA
Gene position: 1284694-1286736 (Clockwise)
Preceding gene: 159897650
Following gene: 159897652
Centisome position: 20.24
GC content: 51.44
Gene sequence:
>2043_bases ATGCTACGAGGTGTCTTCCCAAGCCAGCGCCTAGGCTGGCTTTGGCTTTTAGGCTTGCTTGGAACAGCCCTAGCGCTCAT GCTCAAGGTTCAAGCCCAACTTGAGTTCCGCCATTTCAATGGGGCAGTTATGCTTGGGGCAGCGGTTGCGCTCGGCATTT GGTGGTGGCTGATCAAGCGCCAACCGCCACAAGCTGATATCTTGCCTGAACTCCATGATCAGCCGTTAGATCACCTAACG TTGCGGCTTGGCATAAGCGCTGTATCCTTGCTTAGCGGTTTCGTCGCATGGAATAATCTCTTTGGCAATGAATTTAACTC ACTCTCGACCTGGACATGGCTGTTTGCGATTGGCTTATGGCTGTTGGCATGGATGCCCTGGCAACGCCCACGCTTGCCCA AAGCTGATCGAGCCGAAACCCAACGGGCATGGCTGACCTTCGGCTGTTTGCTGATTGTCACCGCTTTTGGTTTATGGATT CGGCTGTATCGGCTGGATCAAATGCCATATGACATGACGGTTGACCACGGCTGGAAGATGGAAGATGTTTACACCATTTT GCAGGGTGGTCGCCCATTATTTTTGCCCAATAACACAGGTCGCGAGCCAGGCCAATTCTATTACATTGCCATGTTGATTC GCTTTTTTGGCGTGCCGTTTGGTTTTATCGCGCTCAAACTTGGCAATGTGATTATCGGCACGCTAACAATTCCGTTTATC TATTTGTTTGCGCGTGAGCTGGGCGGTCGCAAGTTGGGCATTTTGAGTGCCGCCTTGTATGCGCTAGGCAAATGGCCGCT CGAAACCACTCGCATGGGGTTGCGCTTTCCTTATGCCACCTTGCCCGCCGCGCTGGTGTTGTGGTCACTCTGGCGCTATG TGCGCTTGGGCAAACGCAGCGATGCCTTGCTGGTCGGGTTATGGATGGGCATGGGTTTATATGGCTATATCGGCGTTCGA GCAGTGCCCTTCGTCATTGCCGCCGTATTTGGCCTGATGCTGTTTGAGCGACGACGACGCAACCCCAAAGGCTGGCTCAA ATTGCTCGGCCATGGCAGCCTGACGTTAATCACAACCGCCTTGATTTTCTTGCCGCTCGGCCATTTTATGCTCGATTACC CCGATGTTTTTTGGTTTCGCGTCAGCACCCGCACCAGCAACCATACCGACGATATTAGCCGCGAATTTTGCCAAACTACC AGCAGCGAACGTGAATGCGATATTAAAAAATTCGTTGCCAATAATGTTAATTTAGCGGTCGCGTTTAACTGGCGTGGCGA TCGCAACGAAGTTAATAATGTGCGTTTCGATCCATTGCTTGATGTTGTCAGCGCGGCTTTGCTCTTGTTAAGTTTGCCAA TCGTCGTGTGGCGGTTGTTAGTTGAACGTTCATGGCGTTGGTGGATGCTGGTCGTCGCATTGCCATTACTTGGTTTAGCC ACAACGTTGAGCTTAGCATACCCAATCGAAAACCCCAGCGCAGCGCGGACTGGCGTGCTGATGCCAGTGATTTTTACCAT GGCCGCTGCACCGCTAGCCTTGGCGCTTGAATGGCTAACCAAAGGCCAGCCGTTTGAGCAATGGTGGCGCGGCAAATCAG CCTTGGGTGGATTGCTGAGCATTGGCTTAACAATCTGGCTACTGGCATGGGCTGGACGCGAAAATTTCCAGCGCTACTTT GTTGATATGGCCCGCCAATACACCGGTTTTATCCCGAATAATCGTGAGGTTGCCGATGCGATTCGCTACTATCGCGATGC TCAAGGCGTACCCTACGAAAACGCCTACCTCATGCTCAACAGCTATTTCTGGAAGGAATCGCGCAATATCAGCGTGCATC TAAATGATATGCAATGGTATGTCAACAACACGATTAAGCCCGAAATGGCGCTGGTTGTGCCTGGCAATCGCCCATTAATT TACATTCTCAATCCTGACGATCAAGCCCATATTGATCAATTGCAACAGGAATATCCTAAAGGCGAGTTGCGCCGCATCAG CAGCGCCGTTGGCAAGGATTTTCTGGTGTTTCATTTACGCTAA
Upstream 100 bases:
>100_bases ACTGAATGAACGCCCAGAAACTTTAGATAAACGCAGCTTTGTGAATGTCTTTGTCAAAGCCCGCAAGCCCTTGAGTTAAG TCTGTCAGGAGATCGTGTCC
Downstream 100 bases:
>100_bases TGGCAATTACGCTCGGCACTGCTGGCCATGTTGATCATGGCAAATCAAGCCTCGTTCAAGCCCTGACAGGCATCAACCCC GATCGTTGGGAAGAAGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 680; Mature: 680
Protein sequence:
>680_residues MLRGVFPSQRLGWLWLLGLLGTALALMLKVQAQLEFRHFNGAVMLGAAVALGIWWWLIKRQPPQADILPELHDQPLDHLT LRLGISAVSLLSGFVAWNNLFGNEFNSLSTWTWLFAIGLWLLAWMPWQRPRLPKADRAETQRAWLTFGCLLIVTAFGLWI RLYRLDQMPYDMTVDHGWKMEDVYTILQGGRPLFLPNNTGREPGQFYYIAMLIRFFGVPFGFIALKLGNVIIGTLTIPFI YLFARELGGRKLGILSAALYALGKWPLETTRMGLRFPYATLPAALVLWSLWRYVRLGKRSDALLVGLWMGMGLYGYIGVR AVPFVIAAVFGLMLFERRRRNPKGWLKLLGHGSLTLITTALIFLPLGHFMLDYPDVFWFRVSTRTSNHTDDISREFCQTT SSERECDIKKFVANNVNLAVAFNWRGDRNEVNNVRFDPLLDVVSAALLLLSLPIVVWRLLVERSWRWWMLVVALPLLGLA TTLSLAYPIENPSAARTGVLMPVIFTMAAAPLALALEWLTKGQPFEQWWRGKSALGGLLSIGLTIWLLAWAGRENFQRYF VDMARQYTGFIPNNREVADAIRYYRDAQGVPYENAYLMLNSYFWKESRNISVHLNDMQWYVNNTIKPEMALVVPGNRPLI YILNPDDQAHIDQLQQEYPKGELRRISSAVGKDFLVFHLR
Sequences:
>Translated_680_residues MLRGVFPSQRLGWLWLLGLLGTALALMLKVQAQLEFRHFNGAVMLGAAVALGIWWWLIKRQPPQADILPELHDQPLDHLT LRLGISAVSLLSGFVAWNNLFGNEFNSLSTWTWLFAIGLWLLAWMPWQRPRLPKADRAETQRAWLTFGCLLIVTAFGLWI RLYRLDQMPYDMTVDHGWKMEDVYTILQGGRPLFLPNNTGREPGQFYYIAMLIRFFGVPFGFIALKLGNVIIGTLTIPFI YLFARELGGRKLGILSAALYALGKWPLETTRMGLRFPYATLPAALVLWSLWRYVRLGKRSDALLVGLWMGMGLYGYIGVR AVPFVIAAVFGLMLFERRRRNPKGWLKLLGHGSLTLITTALIFLPLGHFMLDYPDVFWFRVSTRTSNHTDDISREFCQTT SSERECDIKKFVANNVNLAVAFNWRGDRNEVNNVRFDPLLDVVSAALLLLSLPIVVWRLLVERSWRWWMLVVALPLLGLA TTLSLAYPIENPSAARTGVLMPVIFTMAAAPLALALEWLTKGQPFEQWWRGKSALGGLLSIGLTIWLLAWAGRENFQRYF VDMARQYTGFIPNNREVADAIRYYRDAQGVPYENAYLMLNSYFWKESRNISVHLNDMQWYVNNTIKPEMALVVPGNRPLI YILNPDDQAHIDQLQQEYPKGELRRISSAVGKDFLVFHLR >Mature_680_residues MLRGVFPSQRLGWLWLLGLLGTALALMLKVQAQLEFRHFNGAVMLGAAVALGIWWWLIKRQPPQADILPELHDQPLDHLT LRLGISAVSLLSGFVAWNNLFGNEFNSLSTWTWLFAIGLWLLAWMPWQRPRLPKADRAETQRAWLTFGCLLIVTAFGLWI RLYRLDQMPYDMTVDHGWKMEDVYTILQGGRPLFLPNNTGREPGQFYYIAMLIRFFGVPFGFIALKLGNVIIGTLTIPFI YLFARELGGRKLGILSAALYALGKWPLETTRMGLRFPYATLPAALVLWSLWRYVRLGKRSDALLVGLWMGMGLYGYIGVR AVPFVIAAVFGLMLFERRRRNPKGWLKLLGHGSLTLITTALIFLPLGHFMLDYPDVFWFRVSTRTSNHTDDISREFCQTT SSERECDIKKFVANNVNLAVAFNWRGDRNEVNNVRFDPLLDVVSAALLLLSLPIVVWRLLVERSWRWWMLVVALPLLGLA TTLSLAYPIENPSAARTGVLMPVIFTMAAAPLALALEWLTKGQPFEQWWRGKSALGGLLSIGLTIWLLAWAGRENFQRYF VDMARQYTGFIPNNREVADAIRYYRDAQGVPYENAYLMLNSYFWKESRNISVHLNDMQWYVNNTIKPEMALVVPGNRPLI YILNPDDQAHIDQLQQEYPKGELRRISSAVGKDFLVFHLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77919; Mature: 77919
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRGVFPSQRLGWLWLLGLLGTALALMLKVQAQLEFRHFNGAVMLGAAVALGIWWWLIKR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC QPPQADILPELHDQPLDHLTLRLGISAVSLLSGFVAWNNLFGNEFNSLSTWTWLFAIGLW CCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LLAWMPWQRPRLPKADRAETQRAWLTFGCLLIVTAFGLWIRLYRLDQMPYDMTVDHGWKM HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCH EDVYTILQGGRPLFLPNNTGREPGQFYYIAMLIRFFGVPFGFIALKLGNVIIGTLTIPFI HHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH YLFARELGGRKLGILSAALYALGKWPLETTRMGLRFPYATLPAALVLWSLWRYVRLGKRS HHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC DALLVGLWMGMGLYGYIGVRAVPFVIAAVFGLMLFERRRRNPKGWLKLLGHGSLTLITTA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHH LIFLPLGHFMLDYPDVFWFRVSTRTSNHTDDISREFCQTTSSERECDIKKFVANNVNLAV HHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCEEEE AFNWRGDRNEVNNVRFDPLLDVVSAALLLLSLPIVVWRLLVERSWRWWMLVVALPLLGLA EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH TTLSLAYPIENPSAARTGVLMPVIFTMAAAPLALALEWLTKGQPFEQWWRGKSALGGLLS HHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHH IGLTIWLLAWAGRENFQRYFVDMARQYTGFIPNNREVADAIRYYRDAQGVPYENAYLMLN HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEE SYFWKESRNISVHLNDMQWYVNNTIKPEMALVVPGNRPLIYILNPDDQAHIDQLQQEYPK HHHHCCCCCEEEEEECEEEEECCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHCCC GELRRISSAVGKDFLVFHLR HHHHHHHHHCCCCEEEEEEC >Mature Secondary Structure MLRGVFPSQRLGWLWLLGLLGTALALMLKVQAQLEFRHFNGAVMLGAAVALGIWWWLIKR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC QPPQADILPELHDQPLDHLTLRLGISAVSLLSGFVAWNNLFGNEFNSLSTWTWLFAIGLW CCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LLAWMPWQRPRLPKADRAETQRAWLTFGCLLIVTAFGLWIRLYRLDQMPYDMTVDHGWKM HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCH EDVYTILQGGRPLFLPNNTGREPGQFYYIAMLIRFFGVPFGFIALKLGNVIIGTLTIPFI HHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH YLFARELGGRKLGILSAALYALGKWPLETTRMGLRFPYATLPAALVLWSLWRYVRLGKRS HHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC DALLVGLWMGMGLYGYIGVRAVPFVIAAVFGLMLFERRRRNPKGWLKLLGHGSLTLITTA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHH LIFLPLGHFMLDYPDVFWFRVSTRTSNHTDDISREFCQTTSSERECDIKKFVANNVNLAV HHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCEEEE AFNWRGDRNEVNNVRFDPLLDVVSAALLLLSLPIVVWRLLVERSWRWWMLVVALPLLGLA EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH TTLSLAYPIENPSAARTGVLMPVIFTMAAAPLALALEWLTKGQPFEQWWRGKSALGGLLS HHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHH IGLTIWLLAWAGRENFQRYFVDMARQYTGFIPNNREVADAIRYYRDAQGVPYENAYLMLN HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEE SYFWKESRNISVHLNDMQWYVNNTIKPEMALVVPGNRPLIYILNPDDQAHIDQLQQEYPK HHHHCCCCCEEEEEECEEEEECCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHCCC GELRRISSAVGKDFLVFHLR HHHHHHHHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA