| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is thrA [H]
Identifier: 159897630
GI number: 159897630
Start: 1261589
End: 1262593
Strand: Direct
Name: thrA [H]
Synonym: Haur_1101
Alternate gene names: 159897630
Gene position: 1261589-1262593 (Clockwise)
Preceding gene: 159897629
Following gene: 159897636
Centisome position: 19.88
GC content: 55.32
Gene sequence:
>1005_bases ATGCACAATTTAGCAATTTATGGCTTTGGTGGAGTCGGGCGGGCGGTGTTGGCCCAAGCCTTGCCGCACTTCAACCTTGC CTTGGTGGCTGATCGTTCTGGGTATGTGGCGGGACCATTGAGCAATGAACGTTGGTTGGCGGTGGCGACGGCCAAAGCCC AAGGCGCAACCCTAGCTAGTTTGCCCGAGGGAAGCAGCGGTGATTGGCGAGCCGCCTTGCCCGCTGGTTGTTTGGTGGCT GATACGACCGCCGAAGCCAATGCCGCCCAGTTGGTTGAATTGGTTGGGCGTGGAATGCGTTTGGCCTTGGCCAATAAAAA ACCGTTGTGCGAAGATTTAAATTTGTTTCAAGCCTTGGTTGCTGAGCGCTGCACCCGCTACGAGGCTACGGTTGGGGCTG GCTTGCCGATTGTGGTGACCACCAATTTACTGCGCGATACTGGCGATCAGGTTCAGCGCATCGAAGGCGGTTTGAGTGGT ACACTGGGGTTTTTGCTCTCATCAATCGAACAAGGCCAGCCTTATTCGGCGGCTGTGCGTGAAGCTAAAGCCTTGGGCTG GACGGAACCCGACCCGCGTGATGATTTGGGCGGTGTTGACGTAGCGCGTAAAGCTTTGATTTTGGCGCGTACTTTGGGCT ATCAATGGAACTTGAGCGATATTACGATTGAGCCATTGTATCCGGCTGAGTTTGCTGATTTGAGCATTGCTGAATTTATG GCGCAACTTGAGCAACTTGATCCTGGTTATGCCCAACGCCAAGCCGAAGCTGTTGCCCAAGGCCAAACCTTGCGCTATGT GGCGGCGATCACGTCTGAGGGTGCGCGAGTTGGCTTGCAAGCAGTTGCTAAAGATAGCCCGCTTGGCTCGCTCAAAGGGC CAGATAATATGGTGGCTTGGACAACCAACCGCTACCAAGAGCGCCCGTTGGTGGTACGCGGGCCTGGCGCAGGAGTCGAA GTGACCGCTTCGGCAGTCTTGTTTGATCTCTTGGCCTTCCGTTAA
Upstream 100 bases:
>100_bases TTTACGCCAAGTTTGCTTCCTTGTGCTCAGCATTTTTTGCCTAAATAGCTGGCTAACCCGTACAATACAGCCCGACACAT CAGATTAAGGAAGCTCTACG
Downstream 100 bases:
>100_bases ATAAAAACCGTGGTCAACGAAGACCACGGCTCAAACCCTCTTGATAATTGTGAACTATTGACCTGCCATATCCCGCCGCT GGAACAAGAGAATTCCTAAC
Product: homoserine dehydrogenase
Products: NA
Alternate protein names: AK-HD; Aspartokinase; Homoserine dehydrogenase [H]
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MHNLAIYGFGGVGRAVLAQALPHFNLALVADRSGYVAGPLSNERWLAVATAKAQGATLASLPEGSSGDWRAALPAGCLVA DTTAEANAAQLVELVGRGMRLALANKKPLCEDLNLFQALVAERCTRYEATVGAGLPIVVTTNLLRDTGDQVQRIEGGLSG TLGFLLSSIEQGQPYSAAVREAKALGWTEPDPRDDLGGVDVARKALILARTLGYQWNLSDITIEPLYPAEFADLSIAEFM AQLEQLDPGYAQRQAEAVAQGQTLRYVAAITSEGARVGLQAVAKDSPLGSLKGPDNMVAWTTNRYQERPLVVRGPGAGVE VTASAVLFDLLAFR
Sequences:
>Translated_334_residues MHNLAIYGFGGVGRAVLAQALPHFNLALVADRSGYVAGPLSNERWLAVATAKAQGATLASLPEGSSGDWRAALPAGCLVA DTTAEANAAQLVELVGRGMRLALANKKPLCEDLNLFQALVAERCTRYEATVGAGLPIVVTTNLLRDTGDQVQRIEGGLSG TLGFLLSSIEQGQPYSAAVREAKALGWTEPDPRDDLGGVDVARKALILARTLGYQWNLSDITIEPLYPAEFADLSIAEFM AQLEQLDPGYAQRQAEAVAQGQTLRYVAAITSEGARVGLQAVAKDSPLGSLKGPDNMVAWTTNRYQERPLVVRGPGAGVE VTASAVLFDLLAFR >Mature_334_residues MHNLAIYGFGGVGRAVLAQALPHFNLALVADRSGYVAGPLSNERWLAVATAKAQGATLASLPEGSSGDWRAALPAGCLVA DTTAEANAAQLVELVGRGMRLALANKKPLCEDLNLFQALVAERCTRYEATVGAGLPIVVTTNLLRDTGDQVQRIEGGLSG TLGFLLSSIEQGQPYSAAVREAKALGWTEPDPRDDLGGVDVARKALILARTLGYQWNLSDITIEPLYPAEFADLSIAEFM AQLEQLDPGYAQRQAEAVAQGQTLRYVAAITSEGARVGLQAVAKDSPLGSLKGPDNMVAWTTNRYQERPLVVRGPGAGVE VTASAVLFDLLAFR
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0460
COG function: function code E; Homoserine dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the homoserine dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=261, Percent_Identity=41.7624521072797, Blast_Score=193, Evalue=1e-50, Organism=Escherichia coli, GI1790376, Length=270, Percent_Identity=41.1111111111111, Blast_Score=168, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6322599, Length=338, Percent_Identity=32.8402366863905, Blast_Score=158, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR005106 - InterPro: IPR001341 - InterPro: IPR018042 - InterPro: IPR011147 - InterPro: IPR001342 - InterPro: IPR019811 - InterPro: IPR016040 [H]
Pfam domain/function: PF00696 AA_kinase; PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]
EC number: =2.7.2.4; =1.1.1.3 [H]
Molecular weight: Translated: 35329; Mature: 35329
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNLAIYGFGGVGRAVLAQALPHFNLALVADRSGYVAGPLSNERWLAVATAKAQGATLAS CCCEEEEECCCHHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCEEEEEECCCCCCEEEE LPEGSSGDWRAALPAGCLVADTTAEANAAQLVELVGRGMRLALANKKPLCEDLNLFQALV CCCCCCCCEEEECCCCEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH AERCTRYEATVGAGLPIVVTTNLLRDTGDQVQRIEGGLSGTLGFLLSSIEQGQPYSAAVR HHHHHHHHHHHCCCCCEEEEHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHH EAKALGWTEPDPRDDLGGVDVARKALILARTLGYQWNLSDITIEPLYPAEFADLSIAEFM HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEECCCCEEECCCCCCHHCCCHHHHHH AQLEQLDPGYAQRQAEAVAQGQTLRYVAAITSEGARVGLQAVAKDSPLGSLKGPDNMVAW HHHHHCCCCHHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEE TTNRYQERPLVVRGPGAGVEVTASAVLFDLLAFR ECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MHNLAIYGFGGVGRAVLAQALPHFNLALVADRSGYVAGPLSNERWLAVATAKAQGATLAS CCCEEEEECCCHHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCEEEEEECCCCCCEEEE LPEGSSGDWRAALPAGCLVADTTAEANAAQLVELVGRGMRLALANKKPLCEDLNLFQALV CCCCCCCCEEEECCCCEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH AERCTRYEATVGAGLPIVVTTNLLRDTGDQVQRIEGGLSGTLGFLLSSIEQGQPYSAAVR HHHHHHHHHHHCCCCCEEEEHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHH EAKALGWTEPDPRDDLGGVDVARKALILARTLGYQWNLSDITIEPLYPAEFADLSIAEFM HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEECCCCEEECCCCCCHHCCCHHHHHH AQLEQLDPGYAQRQAEAVAQGQTLRYVAAITSEGARVGLQAVAKDSPLGSLKGPDNMVAW HHHHHCCCCHHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEE TTNRYQERPLVVRGPGAGVEVTASAVLFDLLAFR ECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438 [H]