Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897579
Identifier: 159897579
GI number: 159897579
Start: 1198413
End: 1199456
Strand: Direct
Name: 159897579
Synonym: Haur_1050
Alternate gene names: NA
Gene position: 1198413-1199456 (Clockwise)
Preceding gene: 159897578
Following gene: 159897590
Centisome position: 18.88
GC content: 47.61
Gene sequence:
>1044_bases ATGTCAATTCAAGCACCAATTAGTACAGCGCCGACCCAACCACAACAAGGTTGGTTTGCTCAAATACTACGCCATCGTGG AGTTCAACTCACCCTCGTTTTATGGATTTTAGGCCATGGCATTATCATCCTTTTAAGCAATGGTGCTTTGCCATTTGATC GCCCAGCCTTTGCTGAAATTCCCTTTCCGCTTCAGATACTTGCGCCAAGTGTCATGATGTTGGAAATATTTGTGCTGATG GGCTTGGGTTATATGCTGACCCGCAATCGCCCAAGCATCGATCTTGCTGCCCGCGCCCCCGAGCGTAGCCAAGCCATGCG TGAAACCCTGGGCTTGGTTGCTTATGCAGCGTTTGGTCAAGCCTTGGGCTGGGTTCTAGGGCCAATGCTCGGGTTTCAGC CATTAAGTTTCCACTTAGCAGGAACTTTAGTTGGTGGGCATAGTGGTTTATCAGTTGCTGAAGTTTGGGTCTGGGCGATC TACAATTTTGGCTTTTATGCAGTCGTACCCTATCTGTGGTTTCGCCGTCGCTATAGTGCCGTTCAGCTTAATTTGGTTTC CAGCAATCGCCGCAACGATCTCTTGGTTATCGCCGTAATCGCCATCTCAGAATCGCTGTTTGAGCTAACAACCTTGGGTA CAAGCCTCAATCGCTTGAGTTTTGGGCAATTAGCCTTGGGCCTGCCACTTTCACTGTTCATTTATGGCATCGGTACAGTC TTGCCAACCATGATTTTGATCTATTCGATTCTGATTCCACGGTTTCTCAAAATTACTGGTTCGGCGATTACGACAGTGCT GCTGGGCGGCTTAAGCTATGCAATTGTGCATATAGCCGAAGGCTGGACCAACTTTAGCACTCCAACCAATGCGTTGCTTT CGATTCTATTTGTGTTGATCAATTACTTTGGTGCAGGAATGATCAAAACGGTGCTGACCTTACGCACTGGCAATGCATGG GTGCATGCGTTGGGCTATCACACGATTGCCCCACATGTGATCATTGATACGCCACATATTGTGAATATTTTTGGTATTCG CTAA
Upstream 100 bases:
>100_bases CAGGGGTCAGATTTTACTCGACTCATTGGGACTTGACTCTGACACAGTGTCAGGCTTTATGGTCAATCCATCTACTTATG GATTAATCAGGAGCAATCCA
Downstream 100 bases:
>100_bases GCGCAATGCTTAACCCAGCCGCGCAGGGTAATCGTGATGCTAGGCTATCGAAACAACGGTTGGTATTTCAATCTAGCTTC GATAGCCTACAGACCATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MSIQAPISTAPTQPQQGWFAQILRHRGVQLTLVLWILGHGIIILLSNGALPFDRPAFAEIPFPLQILAPSVMMLEIFVLM GLGYMLTRNRPSIDLAARAPERSQAMRETLGLVAYAAFGQALGWVLGPMLGFQPLSFHLAGTLVGGHSGLSVAEVWVWAI YNFGFYAVVPYLWFRRRYSAVQLNLVSSNRRNDLLVIAVIAISESLFELTTLGTSLNRLSFGQLALGLPLSLFIYGIGTV LPTMILIYSILIPRFLKITGSAITTVLLGGLSYAIVHIAEGWTNFSTPTNALLSILFVLINYFGAGMIKTVLTLRTGNAW VHALGYHTIAPHVIIDTPHIVNIFGIR
Sequences:
>Translated_347_residues MSIQAPISTAPTQPQQGWFAQILRHRGVQLTLVLWILGHGIIILLSNGALPFDRPAFAEIPFPLQILAPSVMMLEIFVLM GLGYMLTRNRPSIDLAARAPERSQAMRETLGLVAYAAFGQALGWVLGPMLGFQPLSFHLAGTLVGGHSGLSVAEVWVWAI YNFGFYAVVPYLWFRRRYSAVQLNLVSSNRRNDLLVIAVIAISESLFELTTLGTSLNRLSFGQLALGLPLSLFIYGIGTV LPTMILIYSILIPRFLKITGSAITTVLLGGLSYAIVHIAEGWTNFSTPTNALLSILFVLINYFGAGMIKTVLTLRTGNAW VHALGYHTIAPHVIIDTPHIVNIFGIR >Mature_346_residues SIQAPISTAPTQPQQGWFAQILRHRGVQLTLVLWILGHGIIILLSNGALPFDRPAFAEIPFPLQILAPSVMMLEIFVLMG LGYMLTRNRPSIDLAARAPERSQAMRETLGLVAYAAFGQALGWVLGPMLGFQPLSFHLAGTLVGGHSGLSVAEVWVWAIY NFGFYAVVPYLWFRRRYSAVQLNLVSSNRRNDLLVIAVIAISESLFELTTLGTSLNRLSFGQLALGLPLSLFIYGIGTVL PTMILIYSILIPRFLKITGSAITTVLLGGLSYAIVHIAEGWTNFSTPTNALLSILFVLINYFGAGMIKTVLTLRTGNAWV HALGYHTIAPHVIIDTPHIVNIFGIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38008; Mature: 37876
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIQAPISTAPTQPQQGWFAQILRHRGVQLTLVLWILGHGIIILLSNGALPFDRPAFAEI CCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCC PFPLQILAPSVMMLEIFVLMGLGYMLTRNRPSIDLAARAPERSQAMRETLGLVAYAAFGQ CCCHHHHHHHHHHHHHHHHHCCHHHEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH ALGWVLGPMLGFQPLSFHLAGTLVGGHSGLSVAEVWVWAIYNFGFYAVVPYLWFRRRYSA HHHHHHHHHHCCCCHHEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCE VQLNLVSSNRRNDLLVIAVIAISESLFELTTLGTSLNRLSFGQLALGLPLSLFIYGIGTV EEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHCCHHHHHHCCHHHHHHHHHHHH LPTMILIYSILIPRFLKITGSAITTVLLGGLSYAIVHIAEGWTNFSTPTNALLSILFVLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH NYFGAGMIKTVLTLRTGNAWVHALGYHTIAPHVIIDTPHIVNIFGIR HHHCHHHHHHHHHEECCCCEEEEECHHHCCCEEEECCCCEEEEEECC >Mature Secondary Structure SIQAPISTAPTQPQQGWFAQILRHRGVQLTLVLWILGHGIIILLSNGALPFDRPAFAEI CCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCC PFPLQILAPSVMMLEIFVLMGLGYMLTRNRPSIDLAARAPERSQAMRETLGLVAYAAFGQ CCCHHHHHHHHHHHHHHHHHCCHHHEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH ALGWVLGPMLGFQPLSFHLAGTLVGGHSGLSVAEVWVWAIYNFGFYAVVPYLWFRRRYSA HHHHHHHHHHCCCCHHEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCE VQLNLVSSNRRNDLLVIAVIAISESLFELTTLGTSLNRLSFGQLALGLPLSLFIYGIGTV EEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHCCHHHHHHCCHHHHHHHHHHHH LPTMILIYSILIPRFLKITGSAITTVLLGGLSYAIVHIAEGWTNFSTPTNALLSILFVLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH NYFGAGMIKTVLTLRTGNAWVHALGYHTIAPHVIIDTPHIVNIFGIR HHHCHHHHHHHHHEECCCCEEEEECHHHCCCEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA