Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is mhpC [C]
Identifier: 159897573
GI number: 159897573
Start: 1191596
End: 1192603
Strand: Reverse
Name: mhpC [C]
Synonym: Haur_1044
Alternate gene names: 159897573
Gene position: 1192603-1191596 (Counterclockwise)
Preceding gene: 159897574
Following gene: 159897572
Centisome position: 18.79
GC content: 51.59
Gene sequence:
>1008_bases ATGAATATAAAACCACAAAAACGCTCGCTGTTACGACGGATTGGGCGCTGGCTCGCTTGGCTTGGCCTGTTGATTGTTGG TTTGCTGATCGGCGGTTGGGCGTTTCAGCGCTGGGCCAGCCAGCGTGATCGCCAACAATTTTTGCCAGCCGAGCAGCAAA TTATGCTCAATGGCCATGCGATGCGACTGATTTGTATGGGCAGCGGCAGCCCAACGATCGTGCTCGAATCTGGCTTAGGC GATGGTGCTGATGTTTGGGGCTTAGTCCAACCTGCCTTAGCCGAGCAATATCGGGTTTGTGCCTATGATCGAGTTGGCAT GGGCTGGAGTGCAGCGGTAGCCAACAAGGCTGATCGGGCTTCGATTGCCCAAACCTTGCATGAACTGCTGAGCCAAGCCA ACGTATCAGCGCCATATGTATTGGTTGGCCATTCGGCTGGTGGTTTGTATGTGCGCGAATATGCCCAGCGCTACCCTGAG CAAGTTATTGGTTTGGTGCTGGTCGATTCATCGCACGAACAACAACGCCAACGTCAACCACAGCTTGCTGAAGATCCATT TGCAATCATGCGTCAGTCGATGCAAGCCTGTGATGCCTTAGCGCCATTCGGAATTATTCGGCTGACAAAGCTGTTTGAGC AATCGCAATCGACCTATGCCAAACTTCCACAACCAGCTCAAGCCTCGATTGCAGCTAGCCAATACCAAACGAGCACCTGT AGCGCGATGGATGCGGCCTTGGCAGCAATCACCCAAGATCTGAATCAAGCCCAAGCTCCGCAATCGCTAAAGGATCTCCC GTTGGTGGTATTAACCCGTGGGATTGCTGATAGCACCATGCCAGCGGAATTTGAACAGACGTGGGATAGCTTGCAACAAG AATTAGCTCAGCTTTCGAGCAACAGCCAACATCATATAGCTGAAACCAGTGGTCATTACATTCATCTTGATCAACCAGCG TTGGTGATCGAGGCAGTTGAATGGGTAATCAGCCAACAAGCTAAATAG
Upstream 100 bases:
>100_bases CTATCGCTCTAATTGCTGAGTGCCATTCGCCCTGATTAACCCTGTGGTTTGGCTAGTTCTTGGCTATAGTTGCGCTATAT CTCTAGCTAAGGAATACCCA
Downstream 100 bases:
>100_bases CTAGCAGCGTAGGACAGTGCTCGGTGAGTGTGTTATGATGCAGCGCAGAATGGCCACCACAGGAGGCGCTATGCACACAA TTGGCGTTTTGTATAATCCG
Product: alpha/beta hydrolase fold-domain containing protein
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: Alpha/Beta Hydrolase Fold; Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase; Alpha/Beta Fold Superfamily Hydrolase; Esterase Lipase Family Protein; Protein Containing Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold-Domain Containing Protein; Hydrolase Or Acyltransferase-Like Protein; Alpa/Beta Hydrolase-Thioesterase; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase Or Acyltransferase; Hydrolase Alpha/Beta Fold Family Protein; YqjL Protein; Alpha/Beta Superfamily Hydrolase/Acyltransferase
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MNIKPQKRSLLRRIGRWLAWLGLLIVGLLIGGWAFQRWASQRDRQQFLPAEQQIMLNGHAMRLICMGSGSPTIVLESGLG DGADVWGLVQPALAEQYRVCAYDRVGMGWSAAVANKADRASIAQTLHELLSQANVSAPYVLVGHSAGGLYVREYAQRYPE QVIGLVLVDSSHEQQRQRQPQLAEDPFAIMRQSMQACDALAPFGIIRLTKLFEQSQSTYAKLPQPAQASIAASQYQTSTC SAMDAALAAITQDLNQAQAPQSLKDLPLVVLTRGIADSTMPAEFEQTWDSLQQELAQLSSNSQHHIAETSGHYIHLDQPA LVIEAVEWVISQQAK
Sequences:
>Translated_335_residues MNIKPQKRSLLRRIGRWLAWLGLLIVGLLIGGWAFQRWASQRDRQQFLPAEQQIMLNGHAMRLICMGSGSPTIVLESGLG DGADVWGLVQPALAEQYRVCAYDRVGMGWSAAVANKADRASIAQTLHELLSQANVSAPYVLVGHSAGGLYVREYAQRYPE QVIGLVLVDSSHEQQRQRQPQLAEDPFAIMRQSMQACDALAPFGIIRLTKLFEQSQSTYAKLPQPAQASIAASQYQTSTC SAMDAALAAITQDLNQAQAPQSLKDLPLVVLTRGIADSTMPAEFEQTWDSLQQELAQLSSNSQHHIAETSGHYIHLDQPA LVIEAVEWVISQQAK >Mature_335_residues MNIKPQKRSLLRRIGRWLAWLGLLIVGLLIGGWAFQRWASQRDRQQFLPAEQQIMLNGHAMRLICMGSGSPTIVLESGLG DGADVWGLVQPALAEQYRVCAYDRVGMGWSAAVANKADRASIAQTLHELLSQANVSAPYVLVGHSAGGLYVREYAQRYPE QVIGLVLVDSSHEQQRQRQPQLAEDPFAIMRQSMQACDALAPFGIIRLTKLFEQSQSTYAKLPQPAQASIAASQYQTSTC SAMDAALAAITQDLNQAQAPQSLKDLPLVVLTRGIADSTMPAEFEQTWDSLQQELAQLSSNSQHHIAETSGHYIHLDQPA LVIEAVEWVISQQAK
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.- [C]
Molecular weight: Translated: 36868; Mature: 36868
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKPQKRSLLRRIGRWLAWLGLLIVGLLIGGWAFQRWASQRDRQQFLPAEQQIMLNGHA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCE MRLICMGSGSPTIVLESGLGDGADVWGLVQPALAEQYRVCAYDRVGMGWSAAVANKADRA EEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHH SIAQTLHELLSQANVSAPYVLVGHSAGGLYVREYAQRYPEQVIGLVLVDSSHEQQRQRQP HHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHCCC QLAEDPFAIMRQSMQACDALAPFGIIRLTKLFEQSQSTYAKLPQPAQASIAASQYQTSTC CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SAMDAALAAITQDLNQAQAPQSLKDLPLVVLTRGIADSTMPAEFEQTWDSLQQELAQLSS HHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC NSQHHIAETSGHYIHLDQPALVIEAVEWVISQQAK CCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNIKPQKRSLLRRIGRWLAWLGLLIVGLLIGGWAFQRWASQRDRQQFLPAEQQIMLNGHA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCE MRLICMGSGSPTIVLESGLGDGADVWGLVQPALAEQYRVCAYDRVGMGWSAAVANKADRA EEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHH SIAQTLHELLSQANVSAPYVLVGHSAGGLYVREYAQRYPEQVIGLVLVDSSHEQQRQRQP HHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHCCC QLAEDPFAIMRQSMQACDALAPFGIIRLTKLFEQSQSTYAKLPQPAQASIAASQYQTSTC CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SAMDAALAAITQDLNQAQAPQSLKDLPLVVLTRGIADSTMPAEFEQTWDSLQQELAQLSS HHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC NSQHHIAETSGHYIHLDQPALVIEAVEWVISQQAK CCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA