| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is narP [C]
Identifier: 159897538
GI number: 159897538
Start: 1154055
End: 1154279
Strand: Reverse
Name: narP [C]
Synonym: Haur_1009
Alternate gene names: 159897538
Gene position: 1154279-1154055 (Counterclockwise)
Preceding gene: 159897539
Following gene: 159897537
Centisome position: 18.19
GC content: 45.33
Gene sequence:
>225_bases ATGTCAACATCAACCACTCAACTCACTGCCAGCGAACACCGTGTGATGCAAATCCTAATTCAAGGCAAAACCAACAAAGC CATTGCCCACATCCTTCAGACAACTGAAGGCACAATCGAAACCAGCTTGCATCGGATCTATAGCAAACTCAATGTTGATA ATCGAGTTAGCGCCACTCTTACCTATCTAGCAATTGAACCCACCAAGCATGCTAGGGATTCCTAG
Upstream 100 bases:
>100_bases AGCGATGCAAATGGCACAATACTTTTCTATCATAGCAATAGTTCAAGGCCAGGCAATTAATCGTTTTTCGTCATTAGAAT AGCCTAAATAGGGAGTATTT
Downstream 100 bases:
>100_bases CATGCACCAGCGAAAGCTAGGAGATCCTAGCAGCGCAAGTATAGCGCAATCTCTATACTCTGCTCAACCAGATTAAGGTT TAAACGAAGTACAAGGAGGA
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 73
Protein sequence:
>74_residues MSTSTTQLTASEHRVMQILIQGKTNKAIAHILQTTEGTIETSLHRIYSKLNVDNRVSATLTYLAIEPTKHARDS
Sequences:
>Translated_74_residues MSTSTTQLTASEHRVMQILIQGKTNKAIAHILQTTEGTIETSLHRIYSKLNVDNRVSATLTYLAIEPTKHARDS >Mature_73_residues STSTTQLTASEHRVMQILIQGKTNKAIAHILQTTEGTIETSLHRIYSKLNVDNRVSATLTYLAIEPTKHARDS
Specific function: This Protein Activates The Expression Of The Nitrate Reductase (Narghji) And Formate Dehydrogenase-N (Fdnghi) Operons And Represses The Transcription Of The Fumarate Reductase (Frdabcd) Operon In Response To A Nitrate/Nitrite Induction Signal Transmitted
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8236; Mature: 8105
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSTTQLTASEHRVMQILIQGKTNKAIAHILQTTEGTIETSLHRIYSKLNVDNRVSATL CCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEE TYLAIEPTKHARDS EEEEECCCCCCCCC >Mature Secondary Structure STSTTQLTASEHRVMQILIQGKTNKAIAHILQTTEGTIETSLHRIYSKLNVDNRVSATL CCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEE TYLAIEPTKHARDS EEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA