| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897520
Identifier: 159897520
GI number: 159897520
Start: 1136365
End: 1137405
Strand: Direct
Name: 159897520
Synonym: Haur_0991
Alternate gene names: NA
Gene position: 1136365-1137405 (Clockwise)
Preceding gene: 159897519
Following gene: 159897528
Centisome position: 17.91
GC content: 55.24
Gene sequence:
>1041_bases ATGCTAAAGCCCCTCTACATTTCGCCGCTCGGCAAGGGCGGCGTTGATATTGGCATTCAAAATATCACCCGTTCGATGCA ACGAGCTGGCCATCAACCAAGTTTACGCCGTTTATCGCACTTATTTAATTTTGCCCCGATGGCCGCGAAATTGGCGCTGG GCCGCAATTGGTGGCAAGGCCATGATCTGGTTCAGGCGCGTTCACGCTGCGCATGGGCGTTACGCGCACCTGGTTTGCCA TTGGTGACGACGGTGCATCACATCGTGACCGACCCATTGCTTCAGCCCTATAGCTCACCGCAACAACGCTTGTTTTATCG CTTGGTTGAAAAAACCTACGATGGCTTATCGGTACGCTTGGCTGATGAAGTGATTTGTGTCAGCCGTTACACGCAGGAGC AAACCCGCCTGACCTACGGCGACCGCCCGACCACCGTGATTTACGATGGGATTGATACCGAAGTTTTTACCCCAGCCCCA GATTTTCAGCGCACCAACGATTTGCCTGAGCATCCCGCACCGATTCGTTTGCTGTTTGTTGGCAATCGCACGCGGCGCAA AGGCTTTGATCTGCTGCCAAAAATTATGGATCAACTGGGGCCGCAGTATGTGCTGTATTACACCGAGTCGTTTCAAGGGG TGCAGGCAGCGCCGCCGCATCCGCAGATGGTGCGGATTGGCACGCCCGACCGTGATGGTTTGATTGCGGCCTATCGTTCC TGTGATGTATTGTTGTTTCCGGCGCGAGTTGAAGGCTTTGGAATTGTTGCAGCCGAGGCGGGAGCTTGTGGCAAGCCTGT CATTACCACCAACGCCTCAGCGCTGCCCGAAGTGGTTAATCATGGCGAAACGGGGCTGCTCTGCGAATTGGATAATGTCC AAGCCTTTGTTCAAGCCATCCAAGAGTTGGGCGAAGATCCAGCACGGCGTTTGCAGATGGGCCAAGCCGCCCGCGAACGC GTGGCCAGCAATTTTGGCTACGATGTCTTGGCGCGAGAACTAGCGGCGGTTTACCGTCGCGCCTTATTTGGCACTGCCTA G
Upstream 100 bases:
>100_bases ATATCGGCACTGATGCTAGTGGTATCCGCTACGAAGTAACAATTCGCGCCTCGGTTGCCATTCCTAAGCCCTAATCCGCA CGAGGAAGTTGCAGACATTT
Downstream 100 bases:
>100_bases TTAAGCGTATGAATCAAGGGTTTCGCTCTTATTGCAAAACCCTTGATTTAGATTTCATCACTGAATTATTTCAAGCCATT AATTGCCTTTTTAGGGGGTG
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MLKPLYISPLGKGGVDIGIQNITRSMQRAGHQPSLRRLSHLFNFAPMAAKLALGRNWWQGHDLVQARSRCAWALRAPGLP LVTTVHHIVTDPLLQPYSSPQQRLFYRLVEKTYDGLSVRLADEVICVSRYTQEQTRLTYGDRPTTVIYDGIDTEVFTPAP DFQRTNDLPEHPAPIRLLFVGNRTRRKGFDLLPKIMDQLGPQYVLYYTESFQGVQAAPPHPQMVRIGTPDRDGLIAAYRS CDVLLFPARVEGFGIVAAEAGACGKPVITTNASALPEVVNHGETGLLCELDNVQAFVQAIQELGEDPARRLQMGQAARER VASNFGYDVLARELAAVYRRALFGTA
Sequences:
>Translated_346_residues MLKPLYISPLGKGGVDIGIQNITRSMQRAGHQPSLRRLSHLFNFAPMAAKLALGRNWWQGHDLVQARSRCAWALRAPGLP LVTTVHHIVTDPLLQPYSSPQQRLFYRLVEKTYDGLSVRLADEVICVSRYTQEQTRLTYGDRPTTVIYDGIDTEVFTPAP DFQRTNDLPEHPAPIRLLFVGNRTRRKGFDLLPKIMDQLGPQYVLYYTESFQGVQAAPPHPQMVRIGTPDRDGLIAAYRS CDVLLFPARVEGFGIVAAEAGACGKPVITTNASALPEVVNHGETGLLCELDNVQAFVQAIQELGEDPARRLQMGQAARER VASNFGYDVLARELAAVYRRALFGTA >Mature_346_residues MLKPLYISPLGKGGVDIGIQNITRSMQRAGHQPSLRRLSHLFNFAPMAAKLALGRNWWQGHDLVQARSRCAWALRAPGLP LVTTVHHIVTDPLLQPYSSPQQRLFYRLVEKTYDGLSVRLADEVICVSRYTQEQTRLTYGDRPTTVIYDGIDTEVFTPAP DFQRTNDLPEHPAPIRLLFVGNRTRRKGFDLLPKIMDQLGPQYVLYYTESFQGVQAAPPHPQMVRIGTPDRDGLIAAYRS CDVLLFPARVEGFGIVAAEAGACGKPVITTNASALPEVVNHGETGLLCELDNVQAFVQAIQELGEDPARRLQMGQAARER VASNFGYDVLARELAAVYRRALFGTA
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
Organism=Caenorhabditis elegans, GI32564184, Length=271, Percent_Identity=25.4612546125461, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 38435; Mature: 38435
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKPLYISPLGKGGVDIGIQNITRSMQRAGHQPSLRRLSHLFNFAPMAAKLALGRNWWQG CCCCCEECCCCCCCCEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC HDLVQARSRCAWALRAPGLPLVTTVHHIVTDPLLQPYSSPQQRLFYRLVEKTYDGLSVRL HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEE ADEVICVSRYTQEQTRLTYGDRPTTVIYDGIDTEVFTPAPDFQRTNDLPEHPAPIRLLFV HHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCEEEEEE GNRTRRKGFDLLPKIMDQLGPQYVLYYTESFQGVQAAPPHPQMVRIGTPDRDGLIAAYRS CCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHCCC CDVLLFPARVEGFGIVAAEAGACGKPVITTNASALPEVVNHGETGLLCELDNVQAFVQAI CCEEEEECEECCCEEEEECCCCCCCCEEECCHHHHHHHHCCCCCCEEEEHHHHHHHHHHH QELGEDPARRLQMGQAARERVASNFGYDVLARELAAVYRRALFGTA HHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLKPLYISPLGKGGVDIGIQNITRSMQRAGHQPSLRRLSHLFNFAPMAAKLALGRNWWQG CCCCCEECCCCCCCCEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC HDLVQARSRCAWALRAPGLPLVTTVHHIVTDPLLQPYSSPQQRLFYRLVEKTYDGLSVRL HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEE ADEVICVSRYTQEQTRLTYGDRPTTVIYDGIDTEVFTPAPDFQRTNDLPEHPAPIRLLFV HHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCEEEEEE GNRTRRKGFDLLPKIMDQLGPQYVLYYTESFQGVQAAPPHPQMVRIGTPDRDGLIAAYRS CCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHCCC CDVLLFPARVEGFGIVAAEAGACGKPVITTNASALPEVVNHGETGLLCELDNVQAFVQAI CCEEEEECEECCCEEEEECCCCCCCCEEECCHHHHHHHHCCCCCCEEEEHHHHHHHHHHH QELGEDPARRLQMGQAARERVASNFGYDVLARELAAVYRRALFGTA HHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]