The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is yhdN [C]

Identifier: 159897508

GI number: 159897508

Start: 1122426

End: 1122977

Strand: Direct

Name: yhdN [C]

Synonym: Haur_0979

Alternate gene names: 159897508

Gene position: 1122426-1122977 (Clockwise)

Preceding gene: 159897506

Following gene: 159897509

Centisome position: 17.69

GC content: 48.73

Gene sequence:

>552_bases
ATGAGCGATAATCCATTTCTTGACCGATTTCGTGAGCAAAGCCGCACTTCAGGCAAAATAAAGCCACAAGCACCCGCTTC
CGACCCGAACGCCGACAGCGACAAACCTAAAAAAAGCCCATCGCTCACCGCTCAACGCGCAGGATCGATCGCCGAGCAAC
GCATTCAGGCGGCCATGGAAGATGGCATGTTTGATAATTTGCCAGGCGAAGGCCAACCAATCGATTTAAATGATGATATG
TATATTCCTGCCGAGCTGCGCATGGCCTTTCGGGTGATGAAAGGCAGTCAACAAGGTGCGCCATGGGTTGCCTTGCAACA
CGATTATAATAATCATATCAATCGCTATCAGATTTGGTTGCGTAATAATCGTGAGACATGGGCCGTTACCAGCATTAATG
AGCAAGAACGGTTGCGCCGAGAGTTACAAGTTTGGGTGCGTGATTTGAATACAATCATTCATCAACTTAATGCCATCGTG
CCAAACGACAGCCTCCGCGTTGGTTTGGTGGTCTATGAGCGCGAATTGCGAGCCTTAGAAAGCGCCTTATAA

Upstream 100 bases:

>100_bases
AATCTTTGTGATATTCTGCACATAAGCCTGCAACGACGTTTGAGCAATTGTATGGGGCGCTTGATCTGGCAAGGTTGCAG
CAATACAAGGGGGTTTTAGC

Downstream 100 bases:

>100_bases
CTATGTTTAATGGGAAACAGCGCTATGCTTTATTATCAATTGTTGCAGCATGCGTAACGATTGGTTTGAAGTTTGGCGCT
TATCTTTTGACCGGATCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MSDNPFLDRFREQSRTSGKIKPQAPASDPNADSDKPKKSPSLTAQRAGSIAEQRIQAAMEDGMFDNLPGEGQPIDLNDDM
YIPAELRMAFRVMKGSQQGAPWVALQHDYNNHINRYQIWLRNNRETWAVTSINEQERLRRELQVWVRDLNTIIHQLNAIV
PNDSLRVGLVVYERELRALESAL

Sequences:

>Translated_183_residues
MSDNPFLDRFREQSRTSGKIKPQAPASDPNADSDKPKKSPSLTAQRAGSIAEQRIQAAMEDGMFDNLPGEGQPIDLNDDM
YIPAELRMAFRVMKGSQQGAPWVALQHDYNNHINRYQIWLRNNRETWAVTSINEQERLRRELQVWVRDLNTIIHQLNAIV
PNDSLRVGLVVYERELRALESAL
>Mature_182_residues
SDNPFLDRFREQSRTSGKIKPQAPASDPNADSDKPKKSPSLTAQRAGSIAEQRIQAAMEDGMFDNLPGEGQPIDLNDDMY
IPAELRMAFRVMKGSQQGAPWVALQHDYNNHINRYQIWLRNNRETWAVTSINEQERLRRELQVWVRDLNTIIHQLNAIVP
NDSLRVGLVVYERELRALESAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20982; Mature: 20851

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNPFLDRFREQSRTSGKIKPQAPASDPNADSDKPKKSPSLTAQRAGSIAEQRIQAAME
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
DGMFDNLPGEGQPIDLNDDMYIPAELRMAFRVMKGSQQGAPWVALQHDYNNHINRYQIWL
CCCCCCCCCCCCEECCCCCEECHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEE
RNNRETWAVTSINEQERLRRELQVWVRDLNTIIHQLNAIVPNDSLRVGLVVYERELRALE
ECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHH
SAL
HCC
>Mature Secondary Structure 
SDNPFLDRFREQSRTSGKIKPQAPASDPNADSDKPKKSPSLTAQRAGSIAEQRIQAAME
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
DGMFDNLPGEGQPIDLNDDMYIPAELRMAFRVMKGSQQGAPWVALQHDYNNHINRYQIWL
CCCCCCCCCCCCEECCCCCEECHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEE
RNNRETWAVTSINEQERLRRELQVWVRDLNTIIHQLNAIVPNDSLRVGLVVYERELRALE
ECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHH
SAL
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA