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The map label for this gene is 159897498

Identifier: 159897498

GI number: 159897498

Start: 1111724

End: 1112392

Strand: Direct

Name: 159897498

Synonym: Haur_0969

Alternate gene names: NA

Gene position: 1111724-1112392 (Clockwise)

Preceding gene: 159897497

Following gene: 159897499

Centisome position: 17.52

GC content: 57.4

Gene sequence:

>669_bases
GTGAGTATTGAAACCACCAGCCTCATTAGCGAGTTAGAGGCGATTCATGCCACCCGCGAAATCGCGCTCAAATCGGCTCG
CGAACTGATTCGCCAATGTGCCAACACGATTCGGGCGGTGCATCGCCACGAATGGGCTTTGGCCGAACCACTTTTGCAAG
CAACGGCAGCAGCAGCTCAAAGCCTACGCGAACGCCTTCAGGATTATCCGGCCTTGCTCTATGCAGGCTATACCCAAGAT
GCCTTTAAAGAATATGCCGAAGCGGCATTAACCTTGGCCTTGGTGCGCGGCGAAACTCTGCCAACCCATCATGCCTTGGG
CGTTGAAGCCGCAGCCTATCTCAATGGTTTGGCCGAGGCCGCCAGCGAATTGCGGCGCTATATTCTCGATGGCTTGCGCC
ATGGCAAGGTCGATAGCGGCGAACGCTTGCTCGACCAGATGGATGAGATCTATAGCTTTTTGGTGACGGTCGATTTCCCC
GATGCCGTCACCAGTGGCTTGCGCCGCACAACCGACGCGCTGCGAGCTGTACTCGAACGCACCCGTGGCGATCTAACCAG
CGCTGTGCGCCAAGAACAATTGGTTGCCGCCCTCGCCCGCTTTGAACAGCATATGGGGCTGCCCCCCGCTGCGCTACAGG
AGTCAACGCCCGATGAAACAGACAGTTAG

Upstream 100 bases:

>100_bases
GGATAACAATCAAAGTGCCATGTTCGGCTTTGACTTATCGCGTCATGCCAAGTATGCTATGGGCAGTTTTACACCCAGAG
AGTCTAACAAGGACAACGCT

Downstream 100 bases:

>100_bases
TCATGCCAAGCGCCTGCGCGGGGCAATTAGCGTCCCAGGTGATAAATCGATCTCGCATCGCTCGGTGTTATTTAATGCTT
TAGCCGAGGGCAACGCCGAA

Product: haloacid dehalogenase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSIETTSLISELEAIHATREIALKSARELIRQCANTIRAVHRHEWALAEPLLQATAAAAQSLRERLQDYPALLYAGYTQD
AFKEYAEAALTLALVRGETLPTHHALGVEAAAYLNGLAEAASELRRYILDGLRHGKVDSGERLLDQMDEIYSFLVTVDFP
DAVTSGLRRTTDALRAVLERTRGDLTSAVRQEQLVAALARFEQHMGLPPAALQESTPDETDS

Sequences:

>Translated_222_residues
MSIETTSLISELEAIHATREIALKSARELIRQCANTIRAVHRHEWALAEPLLQATAAAAQSLRERLQDYPALLYAGYTQD
AFKEYAEAALTLALVRGETLPTHHALGVEAAAYLNGLAEAASELRRYILDGLRHGKVDSGERLLDQMDEIYSFLVTVDFP
DAVTSGLRRTTDALRAVLERTRGDLTSAVRQEQLVAALARFEQHMGLPPAALQESTPDETDS
>Mature_221_residues
SIETTSLISELEAIHATREIALKSARELIRQCANTIRAVHRHEWALAEPLLQATAAAAQSLRERLQDYPALLYAGYTQDA
FKEYAEAALTLALVRGETLPTHHALGVEAAAYLNGLAEAASELRRYILDGLRHGKVDSGERLLDQMDEIYSFLVTVDFPD
AVTSGLRRTTDALRAVLERTRGDLTSAVRQEQLVAALARFEQHMGLPPAALQESTPDETDS

Specific function: Unknown

COG id: COG2178

COG function: function code J; Predicted RNA-binding protein of the translin family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002848
- InterPro:   IPR016069
- InterPro:   IPR016068 [H]

Pfam domain/function: PF01997 Translin [H]

EC number: NA

Molecular weight: Translated: 24437; Mature: 24306

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIETTSLISELEAIHATREIALKSARELIRQCANTIRAVHRHEWALAEPLLQATAAAAQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLRERLQDYPALLYAGYTQDAFKEYAEAALTLALVRGETLPTHHALGVEAAAYLNGLAEA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
ASELRRYILDGLRHGKVDSGERLLDQMDEIYSFLVTVDFPDAVTSGLRRTTDALRAVLER
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TRGDLTSAVRQEQLVAALARFEQHMGLPPAALQESTPDETDS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCC
>Mature Secondary Structure 
SIETTSLISELEAIHATREIALKSARELIRQCANTIRAVHRHEWALAEPLLQATAAAAQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLRERLQDYPALLYAGYTQDAFKEYAEAALTLALVRGETLPTHHALGVEAAAYLNGLAEA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
ASELRRYILDGLRHGKVDSGERLLDQMDEIYSFLVTVDFPDAVTSGLRRTTDALRAVLER
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TRGDLTSAVRQEQLVAALARFEQHMGLPPAALQESTPDETDS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]